| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762155
Identifier: 108762155
GI number: 108762155
Start: 731387
End: 731791
Strand: Reverse
Name: 108762155
Synonym: MXAN_0633
Alternate gene names: NA
Gene position: 731791-731387 (Counterclockwise)
Preceding gene: 108761560
Following gene: 108762464
Centisome position: 8.01
GC content: 68.4
Gene sequence:
>405_bases ATGCGGGGGGACGAAGCCCTCTTTTCGACAGGTTTTCCGCACGCCATGGAACAACGACTGGCAACCCTCATTGGAAACGC GGTCCGCGCGGCGCGACAACGGCTGGAGCTGACCCAGGCTGACGTGGCCGAGCGCGTTGGCATCGCCACCGAGGTGTATG GCCGCCTGGAGCGCGGCCACATGCTCCCCAGCGTCCGCACGTTGCGCAAGCTGTGCCTGGTGCTCAACTGCTCGTCGGAC GTGCTCTTGGGAATGGCGGGCGTGGAAGGCGCGCCCACGCTGGCGGAGGATCCGCCGGAATACCGCGAGCGCCCGGAAGT CCGCCGGCTGCTGCGCACGGTGCGCAAGCTGGACGCACCGCGTCTTCGCCTGTTGGGGCAGGTGGCGAACGCGCTCGAGA CGTAG
Upstream 100 bases:
>100_bases AGGCCCTCCCGGAAGCCCCGGAATGTCAGACCCCACTCGTAATCTGTGTTCCACGAGGCAGCCAACGGCCGTCACTTCTC CCCGGAGCCTCTCCGCCTGG
Downstream 100 bases:
>100_bases CGATACAGCGGAGACCCGGCCGGGGCGGTGGAGACCCTGGCTGGGACCTGAAGGGTGGTGAGGGGCCGGACGGATTGCGC CCTGGCGCAAGCGCTTGGCG
Product: DNA-binding protein
Products: NA
Alternate protein names: Transcriptional Repressor; Transcriptional Regulator; Lambda Transcriptional Repressor-Like Protein
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MRGDEALFSTGFPHAMEQRLATLIGNAVRAARQRLELTQADVAERVGIATEVYGRLERGHMLPSVRTLRKLCLVLNCSSD VLLGMAGVEGAPTLAEDPPEYRERPEVRRLLRTVRKLDAPRLRLLGQVANALET
Sequences:
>Translated_134_residues MRGDEALFSTGFPHAMEQRLATLIGNAVRAARQRLELTQADVAERVGIATEVYGRLERGHMLPSVRTLRKLCLVLNCSSD VLLGMAGVEGAPTLAEDPPEYRERPEVRRLLRTVRKLDAPRLRLLGQVANALET >Mature_134_residues MRGDEALFSTGFPHAMEQRLATLIGNAVRAARQRLELTQADVAERVGIATEVYGRLERGHMLPSVRTLRKLCLVLNCSSD VLLGMAGVEGAPTLAEDPPEYRERPEVRRLLRTVRKLDAPRLRLLGQVANALET
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14859; Mature: 14859
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGDEALFSTGFPHAMEQRLATLIGNAVRAARQRLELTQADVAERVGIATEVYGRLERGH CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC MLPSVRTLRKLCLVLNCSSDVLLGMAGVEGAPTLAEDPPEYRERPEVRRLLRTVRKLDAP CCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCH RLRLLGQVANALET HHHHHHHHHHHHCC >Mature Secondary Structure MRGDEALFSTGFPHAMEQRLATLIGNAVRAARQRLELTQADVAERVGIATEVYGRLERGH CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC MLPSVRTLRKLCLVLNCSSDVLLGMAGVEGAPTLAEDPPEYRERPEVRRLLRTVRKLDAP CCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCH RLRLLGQVANALET HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA