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The map label for this gene is cirA [H]

Identifier: 108762023

GI number: 108762023

Start: 5687437

End: 5690190

Strand: Reverse

Name: cirA [H]

Synonym: MXAN_4559

Alternate gene names: 108762023

Gene position: 5690190-5687437 (Counterclockwise)

Preceding gene: 108759966

Following gene: 108758742

Centisome position: 62.26

GC content: 68.99

Gene sequence:

>2754_bases
ATGAGAGCCAGCGACTTGGCCCGGCGTTGTCTCTGGGGTAGCTTGAAAATGATGGCGTTGGTGTCCAGCCGAGAAACCGC
GTTCCCCCGGACGCAAGCGCTGGCGCCGAGCCCGTCTCCGGGTCGTACGTACAGGACCTCGGGTGTCCATGCTCCACCCT
TGGATGTGAGAACGATGCACTCGACTCTGTTCGGTGAGCCGCGGCTGGGCGCGGCGAAGGCGGTTGCCGGTCGCCGCGCC
CTGCGCGCCGGCCTGCCTCTTTCCATCATGCTGTGCGTGCTGTCCCTCGCCGTCCCTTCGAGCGCGGCAGCGCAGGAGGC
CGCGGAGGCGGAGGCTCCCGCCAAGGTGAAACGCCGGAAGCGGGTGGTGAAGCCCGCGGCCCCCGCGCGTCCCGCCGCGA
AGACGGCGAAGAAGCCGAAGAAGCCCGTGAAGCCGCCCATCGAGGACGCGGATGAGCCGGAGATTCCCGTCCTGGGTGGC
GGGCCTGCCACGGATGATCCGTCGCCCGCGAGCGCGCCGGCACCCGTGCCCACGCCGCCCTCCGCCGCGCCCCTGACGCC
GGCCACGCCCCTGACGGCCGAGCCTGCCTCACCGCAGGCGCTGCCGCCGGTCGGCGCGGACTTCAACCCGCCGGACGCGC
CGACGCATCTCTCGCCGGCCACCGCGACGCTGCCCGCGCACCAGCCCGCGCCCTCGTCGAACATTCCCATCAGCGCGCCC
TTCGCGGAGCCGACCCTGGATCGCCCCTTGCCGCCGCAGTCCGGGCTCGCGGGCCTGGGGACGGACCCGCTGGACGGCGC
CGACGCGCTGGAGGAGTCCGTCAACCGCGTGCTGAGCGAGGCGGTGGTGACCACCGCCGGCAAGCGCAACCAGCGCATCT
CCGACGTGCCCCTCACGGTGTCCTGGATTCCGGCCGACGAGTTGGAAGGCACTGGCCAGTTCACGCTGTGCGAGGCCATC
CAGTACTTCCCCGGCATGGAGTGCCGCCGGGGCTCCATGCGCAAGGCGGCGGTGAGCGCGCGCGGCCTGGGCTCCAACTA
CCTGTCCAACCGCCTGTTGCTGCTCCAGGACGGCCGTCCGCTGACGGACCCGTGGACGGGCCAGTTCTACGGGGACGAAA
CCACGCCGCTCACCAACCTCAAGCAGGTGGAGGTCATCCGCGGCCCGGGTTCCTCGCTGTACGGCTCCAACGCCTTCAGC
GGCGTCATCAACGTCATCCAGCGCCAGCCGTCGGACCTCATCGAGAAGGGCAAGAACGTGGGCGCCGAGGCCCGGGTGCT
GGCGGGCCAGGACCAGACGTGGCGTCTGCATGGCACCGTGGCGGGCCGTGGTGGTCCGGTGGAGGCGCTGCTGGGCTACT
ACGGCTTCGGCTCGGACGGCCCGCAGCTCTTCAACGACCCGCGCGTGGGCCGGGTGGACACCAACCAGGACTCACTGGTT
CACCAGGTCAACGGCAAGGTGCGCATCGGGCCCCTGGCGCTGGACGCGGACTTCACGGACGCGGAGATTGGCCGCCCGGG
TGGCACGCACATCTCCACCGTGGGCAACTGCGGCCGCTGCCACTACACGCCGAACGACTCCGAGTCGGTGCAGAACTTCA
ACGCGTCCGCGCAGGTGGACCAGCAAGTCACCGATAACCTGCGCCTCTTCGGCCAGGCGTACGGCCTCTTCAAGCGCCGC
GACGTGTTGATGGAGAACGCCTTCGGCGGCGACCCCACCCGTGCGCTGGGCAAGCGGCGCCGGCTGGGCGGCGAGGCGCG
CGCGCTGTGGACGATGGGCGACCTCAACGTCACCTTCGGTGGTGACTTGAAGGCGGACGCCGTCAACGTGCCCAACGTCC
TGCCCGAGCTGAGCATGGACGACACGCGGCAGACCATCCTGGGCGGCTTCGTGGACGCGGAGTACCGCCTCTTCAACCGG
CTGGTGTTCGGCGCGGGTGCCCGTTACGACCGCTACCAGATTCCGGAGCGGGTCTGGCAGAACCGCACGGACCAGGTTTC
GCCGCGCGCCAGCGTCGTGTTCCACGCGGTGCCGGAGTTGCTGACGTTGCGCACCAACTACGGCCGCGCCTTCCGTGCGC
CCACGTTGGCGGAGCTGGCCATCAACCAGCAGATGTACGCGGCCACACTGGTGGGCAACTCCAACCTTCGCGCGGAGACG
CTGGACACCATCGAGGCATCGGTGGATTTCTGGCCTTTCGATCGGAGGGTGCGCCTGACGGGTACGGGCTTCTACAATCT
GGCGAAGAACTTCATCAACCAGCAGCTCGTCTTCGGCTCTGTGTCGCAGTTCCAGAACCTGGGCGACGCGCGGGTGGCGG
GCTTCGAGCTGGAAGCGGCCGCGCAGATTCCGTCCATCAACTCGTCCTTCGACATCGCGTACCAGTTCCTCGACGCCAAG
GCGCTGCCGTACGACGACGGCCCTCAGTCACCGCTGGACTACGCGCCGGCCCATCGCATCTACGCGCGTGGCCGGACCAA
CATCGGCAAGGTCGCCTTCGTGGAGCTGTACGCGCTGCTGGTGGGCTCACGTTATGACCCGGGCTTCGAGGTGGACGAGA
CGACGGGCCTGCCCACCACCCGCGTGCAGCTGCCCAGCTACGTCACGGCCAGCGCGCGTGTGGGCTTCAACGTCTACGAC
GGCATCTCCGTGTCGTTCCTCGGCTCCAACCTCTTCAACGCGAAGTACGAGGAGTCCCACGGCTTCCCAGCACCGCCCCA
GTCGTTCTTCAGCGAAGTCAAGGTTCGATACTAG

Upstream 100 bases:

>100_bases
CGCTCGGAGGAGCTGGGCCCCGCGCTTCCGTCCTTCGTTGGAGACCTCGCCGTCTCCGCGGAACAGCCGGACGACTGAAC
CTTTCCCGAGTTTCTAGAGA

Downstream 100 bases:

>100_bases
CCCTTGAGTACCGCCCCCCACCTGGAGGCCGGCGGCCTCCTGTTGATTGCAGACGAGTCGCTTTCTCCGGTGCTGGTGGA
GCAGGCGGCTCCCGTCCTCG

Product: putative TonB dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 917; Mature: 917

Protein sequence:

>917_residues
MRASDLARRCLWGSLKMMALVSSRETAFPRTQALAPSPSPGRTYRTSGVHAPPLDVRTMHSTLFGEPRLGAAKAVAGRRA
LRAGLPLSIMLCVLSLAVPSSAAAQEAAEAEAPAKVKRRKRVVKPAAPARPAAKTAKKPKKPVKPPIEDADEPEIPVLGG
GPATDDPSPASAPAPVPTPPSAAPLTPATPLTAEPASPQALPPVGADFNPPDAPTHLSPATATLPAHQPAPSSNIPISAP
FAEPTLDRPLPPQSGLAGLGTDPLDGADALEESVNRVLSEAVVTTAGKRNQRISDVPLTVSWIPADELEGTGQFTLCEAI
QYFPGMECRRGSMRKAAVSARGLGSNYLSNRLLLLQDGRPLTDPWTGQFYGDETTPLTNLKQVEVIRGPGSSLYGSNAFS
GVINVIQRQPSDLIEKGKNVGAEARVLAGQDQTWRLHGTVAGRGGPVEALLGYYGFGSDGPQLFNDPRVGRVDTNQDSLV
HQVNGKVRIGPLALDADFTDAEIGRPGGTHISTVGNCGRCHYTPNDSESVQNFNASAQVDQQVTDNLRLFGQAYGLFKRR
DVLMENAFGGDPTRALGKRRRLGGEARALWTMGDLNVTFGGDLKADAVNVPNVLPELSMDDTRQTILGGFVDAEYRLFNR
LVFGAGARYDRYQIPERVWQNRTDQVSPRASVVFHAVPELLTLRTNYGRAFRAPTLAELAINQQMYAATLVGNSNLRAET
LDTIEASVDFWPFDRRVRLTGTGFYNLAKNFINQQLVFGSVSQFQNLGDARVAGFELEAAAQIPSINSSFDIAYQFLDAK
ALPYDDGPQSPLDYAPAHRIYARGRTNIGKVAFVELYALLVGSRYDPGFEVDETTGLPTTRVQLPSYVTASARVGFNVYD
GISVSFLGSNLFNAKYEESHGFPAPPQSFFSEVKVRY

Sequences:

>Translated_917_residues
MRASDLARRCLWGSLKMMALVSSRETAFPRTQALAPSPSPGRTYRTSGVHAPPLDVRTMHSTLFGEPRLGAAKAVAGRRA
LRAGLPLSIMLCVLSLAVPSSAAAQEAAEAEAPAKVKRRKRVVKPAAPARPAAKTAKKPKKPVKPPIEDADEPEIPVLGG
GPATDDPSPASAPAPVPTPPSAAPLTPATPLTAEPASPQALPPVGADFNPPDAPTHLSPATATLPAHQPAPSSNIPISAP
FAEPTLDRPLPPQSGLAGLGTDPLDGADALEESVNRVLSEAVVTTAGKRNQRISDVPLTVSWIPADELEGTGQFTLCEAI
QYFPGMECRRGSMRKAAVSARGLGSNYLSNRLLLLQDGRPLTDPWTGQFYGDETTPLTNLKQVEVIRGPGSSLYGSNAFS
GVINVIQRQPSDLIEKGKNVGAEARVLAGQDQTWRLHGTVAGRGGPVEALLGYYGFGSDGPQLFNDPRVGRVDTNQDSLV
HQVNGKVRIGPLALDADFTDAEIGRPGGTHISTVGNCGRCHYTPNDSESVQNFNASAQVDQQVTDNLRLFGQAYGLFKRR
DVLMENAFGGDPTRALGKRRRLGGEARALWTMGDLNVTFGGDLKADAVNVPNVLPELSMDDTRQTILGGFVDAEYRLFNR
LVFGAGARYDRYQIPERVWQNRTDQVSPRASVVFHAVPELLTLRTNYGRAFRAPTLAELAINQQMYAATLVGNSNLRAET
LDTIEASVDFWPFDRRVRLTGTGFYNLAKNFINQQLVFGSVSQFQNLGDARVAGFELEAAAQIPSINSSFDIAYQFLDAK
ALPYDDGPQSPLDYAPAHRIYARGRTNIGKVAFVELYALLVGSRYDPGFEVDETTGLPTTRVQLPSYVTASARVGFNVYD
GISVSFLGSNLFNAKYEESHGFPAPPQSFFSEVKVRY
>Mature_917_residues
MRASDLARRCLWGSLKMMALVSSRETAFPRTQALAPSPSPGRTYRTSGVHAPPLDVRTMHSTLFGEPRLGAAKAVAGRRA
LRAGLPLSIMLCVLSLAVPSSAAAQEAAEAEAPAKVKRRKRVVKPAAPARPAAKTAKKPKKPVKPPIEDADEPEIPVLGG
GPATDDPSPASAPAPVPTPPSAAPLTPATPLTAEPASPQALPPVGADFNPPDAPTHLSPATATLPAHQPAPSSNIPISAP
FAEPTLDRPLPPQSGLAGLGTDPLDGADALEESVNRVLSEAVVTTAGKRNQRISDVPLTVSWIPADELEGTGQFTLCEAI
QYFPGMECRRGSMRKAAVSARGLGSNYLSNRLLLLQDGRPLTDPWTGQFYGDETTPLTNLKQVEVIRGPGSSLYGSNAFS
GVINVIQRQPSDLIEKGKNVGAEARVLAGQDQTWRLHGTVAGRGGPVEALLGYYGFGSDGPQLFNDPRVGRVDTNQDSLV
HQVNGKVRIGPLALDADFTDAEIGRPGGTHISTVGNCGRCHYTPNDSESVQNFNASAQVDQQVTDNLRLFGQAYGLFKRR
DVLMENAFGGDPTRALGKRRRLGGEARALWTMGDLNVTFGGDLKADAVNVPNVLPELSMDDTRQTILGGFVDAEYRLFNR
LVFGAGARYDRYQIPERVWQNRTDQVSPRASVVFHAVPELLTLRTNYGRAFRAPTLAELAINQQMYAATLVGNSNLRAET
LDTIEASVDFWPFDRRVRLTGTGFYNLAKNFINQQLVFGSVSQFQNLGDARVAGFELEAAAQIPSINSSFDIAYQFLDAK
ALPYDDGPQSPLDYAPAHRIYARGRTNIGKVAFVELYALLVGSRYDPGFEVDETTGLPTTRVQLPSYVTASARVGFNVYD
GISVSFLGSNLFNAKYEESHGFPAPPQSFFSEVKVRY

Specific function: Not yet known. Postulated to participate in iron transport. Outer membrane receptor for colicins IA and IB [H]

COG id: COG4771

COG function: function code P; Outer membrane receptor for ferrienterochelin and colicins

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1788478, Length=588, Percent_Identity=23.469387755102, Blast_Score=103, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010916
- InterPro:   IPR010917 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 98526; Mature: 98526

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRASDLARRCLWGSLKMMALVSSRETAFPRTQALAPSPSPGRTYRTSGVHAPPLDVRTMH
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCEECCCCCCCCCCHHHHH
STLFGEPRLGAAKAVAGRRALRAGLPLSIMLCVLSLAVPSSAAAQEAAEAEAPAKVKRRK
HHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHH
RVVKPAAPARPAAKTAKKPKKPVKPPIEDADEPEIPVLGGGPATDDPSPASAPAPVPTPP
HHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC
SAAPLTPATPLTAEPASPQALPPVGADFNPPDAPTHLSPATATLPAHQPAPSSNIPISAP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEECC
FAEPTLDRPLPPQSGLAGLGTDPLDGADALEESVNRVLSEAVVTTAGKRNQRISDVPLTV
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
SWIPADELEGTGQFTLCEAIQYFPGMECRRGSMRKAAVSARGLGSNYLSNRLLLLQDGRP
EECCHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHCCCEEEEECCCC
LTDPWTGQFYGDETTPLTNLKQVEVIRGPGSSLYGSNAFSGVINVIQRQPSDLIEKGKNV
CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCC
GAEARVLAGQDQTWRLHGTVAGRGGPVEALLGYYGFGSDGPQLFNDPRVGRVDTNQDSLV
CCCEEEEECCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCHHCCCCCCCCCCCCHHHHH
HQVNGKVRIGPLALDADFTDAEIGRPGGTHISTVGNCGRCHYTPNDSESVQNFNASAQVD
HHCCCEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCEECCCCCCHHHHHHCCCCHHHH
QQVTDNLRLFGQAYGLFKRRDVLMENAFGGDPTRALGKRRRLGGEARALWTMGDLNVTFG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCEEEEEC
GDLKADAVNVPNVLPELSMDDTRQTILGGFVDAEYRLFNRLVFGAGARYDRYQIPERVWQ
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHC
NRTDQVSPRASVVFHAVPELLTLRTNYGRAFRAPTLAELAINQQMYAATLVGNSNLRAET
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCEEEEEEECCCCCCHHH
LDTIEASVDFWPFDRRVRLTGTGFYNLAKNFINQQLVFGSVSQFQNLGDARVAGFELEAA
HHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCEECEEEHHH
AQIPSINSSFDIAYQFLDAKALPYDDGPQSPLDYAPAHRIYARGRTNIGKVAFVELYALL
HCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHH
VGSRYDPGFEVDETTGLPTTRVQLPSYVTASARVGFNVYDGISVSFLGSNLFNAKYEESH
HCCCCCCCCCCCCCCCCCCEEEECCCEEEEHHCCCCEEECCCEEEEECCCCCCCCHHHCC
GFPAPPQSFFSEVKVRY
CCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MRASDLARRCLWGSLKMMALVSSRETAFPRTQALAPSPSPGRTYRTSGVHAPPLDVRTMH
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCEECCCCCCCCCCHHHHH
STLFGEPRLGAAKAVAGRRALRAGLPLSIMLCVLSLAVPSSAAAQEAAEAEAPAKVKRRK
HHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHH
RVVKPAAPARPAAKTAKKPKKPVKPPIEDADEPEIPVLGGGPATDDPSPASAPAPVPTPP
HHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC
SAAPLTPATPLTAEPASPQALPPVGADFNPPDAPTHLSPATATLPAHQPAPSSNIPISAP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEECC
FAEPTLDRPLPPQSGLAGLGTDPLDGADALEESVNRVLSEAVVTTAGKRNQRISDVPLTV
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
SWIPADELEGTGQFTLCEAIQYFPGMECRRGSMRKAAVSARGLGSNYLSNRLLLLQDGRP
EECCHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHCCCEEEEECCCC
LTDPWTGQFYGDETTPLTNLKQVEVIRGPGSSLYGSNAFSGVINVIQRQPSDLIEKGKNV
CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCC
GAEARVLAGQDQTWRLHGTVAGRGGPVEALLGYYGFGSDGPQLFNDPRVGRVDTNQDSLV
CCCEEEEECCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCHHCCCCCCCCCCCCHHHHH
HQVNGKVRIGPLALDADFTDAEIGRPGGTHISTVGNCGRCHYTPNDSESVQNFNASAQVD
HHCCCEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCEECCCCCCHHHHHHCCCCHHHH
QQVTDNLRLFGQAYGLFKRRDVLMENAFGGDPTRALGKRRRLGGEARALWTMGDLNVTFG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCEEEEEC
GDLKADAVNVPNVLPELSMDDTRQTILGGFVDAEYRLFNRLVFGAGARYDRYQIPERVWQ
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHC
NRTDQVSPRASVVFHAVPELLTLRTNYGRAFRAPTLAELAINQQMYAATLVGNSNLRAET
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCEEEEEEECCCCCCHHH
LDTIEASVDFWPFDRRVRLTGTGFYNLAKNFINQQLVFGSVSQFQNLGDARVAGFELEAA
HHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCEECEEEHHH
AQIPSINSSFDIAYQFLDAKALPYDDGPQSPLDYAPAHRIYARGRTNIGKVAFVELYALL
HCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHH
VGSRYDPGFEVDETTGLPTTRVQLPSYVTASARVGFNVYDGISVSFLGSNLFNAKYEESH
HCCCCCCCCCCCCCCCCCCEEEECCCEEEEHHCCCCEEECCCEEEEECCCCCCCCHHHCC
GFPAPPQSFFSEVKVRY
CCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2644220; 9278503; 3316180; 1315732; 2160948 [H]