| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is 108762013
Identifier: 108762013
GI number: 108762013
Start: 5050836
End: 5052500
Strand: Direct
Name: 108762013
Synonym: MXAN_4107
Alternate gene names: NA
Gene position: 5050836-5052500 (Clockwise)
Preceding gene: 108762832
Following gene: 108763911
Centisome position: 55.26
GC content: 66.85
Gene sequence:
>1665_bases ATGCGCATCGTTTCGAAAGGGGCCCGTGGCCTTTCCGCACTGCTTGGCGCGGCGGCCCTGGCATCCATCGGTTGTGGTGA TGTCCCGGACGCGTCGGAGAGCTCCCAGGCCGAGCTCCTGCAGACAAGCGCGCCTCTGGATTGCCTCTCCTCCATCAAAC CGGAGCGGGAGCTGCTCATCCAGGATGCGACCGTGCTGAATGACCCGGTGCGTACGGCCTGGTCCGGAGCGATGCCCATG GTGCGCGGGGCCGCGGACGGCGCGTGGAGCTTCGGCCGACGACTGGCGGAGATGAGCGGAGACGTCGCGCCCTCCGAGTT CGTCCGCGACAGGCTCCAGCGGGGTGCGGAACAGGACGCGGTCGCCCGCACGCTCGTGCCCCAGCTCCTCGAAGCGTGGC CCCGACTCGCGGATGGCACCCTGGACATGACGAAGGCACCGATGCGGCTGAAGGCCATCGTCAACCACGTGGACACCCAC AATTCGGACCGGCACAGCGCTGGCGAGGGCCACCTGGTCTTCGATGCAATCGATGCGGACGGCAAGCCACTGCCCCTCAC CGCCACCCTCGTGTACGACCTGCATGCATCCAAGCCCTCGGACGCGCTCCACTGGGCCCGGCAATGGCATGCACTCGCCA CGCAGACTCCGGGTACGGAGGCATTCAACACCACCCTCCAGGCCGTCACCGACCGATTCACCGCCGCCCCAGGCCGGCTC CAGGTGAGCACGACGGAATCGGTCCTCGACTCAGCGCGCTCGAAATCCACCGACGCGCGGCGCCTCGCGAAGGACTTCGG AAACCTGCTGTGCACCGATAGCGCAGCCCCTACCGTGACGCTCCTCTCGCCGAGCCCGGACAGTGCCGTGCGCGGCACCA TCACCCTGACGGCGAGCGCCTACGATGACGTCGGCGTCACGCGCGTGGACTTCTTCTCAGGGTCCACCCTCATCGCCTCC GACGCCCAGCCCCCTTTCATCGTGGACTGGGACACGACGACGTCCCCCTCCGGCACCCGGGCGCTGACAGCCCAGGCCTT CGACGCGGACGGCAACATGGGCATCTCCGACCCGGTGAGCGTCATGGTGGACAACTTCGCTCCCATCATTCTTTCGGGCA CGCCCCAGTACAACCCGCAGACCCTGAACTATGTGCGCGGCAACATCACCGTGGGCTGGACCGTGACGGACCAGTCCCTC TCAGGCGTGGTCCTGGCCGAGTTCTTCCAGGAGGGGTACCTCAAGGGCTCGCTGACGAGCCCCACCAGCCTTGGGTACAC CTTCCCGTGGGACACGCGGGTGCTGGCCAATCGATCCTACAGCCTGACCCTGCGCGCGACTGACAGGGCAGGCAATGTCG CGACGCACACCCGTTCGCTGATCGTCGACAACGCGCCGCCCACGTCCGTCCTGACCGCACCGGCCAACGGAGACGTCGTC AGTGGTGTCGTCACGCTGGCGGCCAATGCGAGTGACAGCCAATCGCTCTACTACGTCGCCTTCGAGATCGACGGTGTCAT CCAGACACCCTATTCGACCACCGCGCCCTTCACCCGTACGTGGGACACGACGGGCAAGTCCGGCACGCACGTCATTGTCG CCATCGCGTATGACCGCGTGGGCAACAGCCAACGCAGCAACGCAGTGACGGTCACCGTTCCGTGA
Upstream 100 bases:
>100_bases CTCCCCTCCCCTGGCGCGCCCCAGCCGATTGTTTGATATATCGTTGCGCGCTGCCGCTCTCAATTCCATGCGAGCACAGC CTCCTCAAGGGAGAATCCAC
Downstream 100 bases:
>100_bases GCCACAGGCGGGCACTGACGCCCCGGTAGCCCCCCGGGTCTCACCTTGTCCGGGTGCCCCGTCGAAGGGCCGCGCCAGAC CTGCTGGCGCGGCCTCTCTC
Product: putative lipoprotein
Products: NA
Alternate protein names: Peptidase S8 And; Serine Protease; Fibronectin Type III Domain Protein; Alkaline Serine Protease; Peptidase S8/S53 Subtilisin Kexin Sedolisin; Lipoprotein; PKD Domain-Containing Protein; BNR Repeat-Containing Glycosyl Hydrolase; Peptidase S8a Subfamily; Beta-Glycosidase-Like Protein; Peptidase S8a; Peptidase; Aminopeptidase; Thermostable Serine Protease; Esterase Phb Depolymerase Family
Number of amino acids: Translated: 554; Mature: 554
Protein sequence:
>554_residues MRIVSKGARGLSALLGAAALASIGCGDVPDASESSQAELLQTSAPLDCLSSIKPERELLIQDATVLNDPVRTAWSGAMPM VRGAADGAWSFGRRLAEMSGDVAPSEFVRDRLQRGAEQDAVARTLVPQLLEAWPRLADGTLDMTKAPMRLKAIVNHVDTH NSDRHSAGEGHLVFDAIDADGKPLPLTATLVYDLHASKPSDALHWARQWHALATQTPGTEAFNTTLQAVTDRFTAAPGRL QVSTTESVLDSARSKSTDARRLAKDFGNLLCTDSAAPTVTLLSPSPDSAVRGTITLTASAYDDVGVTRVDFFSGSTLIAS DAQPPFIVDWDTTTSPSGTRALTAQAFDADGNMGISDPVSVMVDNFAPIILSGTPQYNPQTLNYVRGNITVGWTVTDQSL SGVVLAEFFQEGYLKGSLTSPTSLGYTFPWDTRVLANRSYSLTLRATDRAGNVATHTRSLIVDNAPPTSVLTAPANGDVV SGVVTLAANASDSQSLYYVAFEIDGVIQTPYSTTAPFTRTWDTTGKSGTHVIVAIAYDRVGNSQRSNAVTVTVP
Sequences:
>Translated_554_residues MRIVSKGARGLSALLGAAALASIGCGDVPDASESSQAELLQTSAPLDCLSSIKPERELLIQDATVLNDPVRTAWSGAMPM VRGAADGAWSFGRRLAEMSGDVAPSEFVRDRLQRGAEQDAVARTLVPQLLEAWPRLADGTLDMTKAPMRLKAIVNHVDTH NSDRHSAGEGHLVFDAIDADGKPLPLTATLVYDLHASKPSDALHWARQWHALATQTPGTEAFNTTLQAVTDRFTAAPGRL QVSTTESVLDSARSKSTDARRLAKDFGNLLCTDSAAPTVTLLSPSPDSAVRGTITLTASAYDDVGVTRVDFFSGSTLIAS DAQPPFIVDWDTTTSPSGTRALTAQAFDADGNMGISDPVSVMVDNFAPIILSGTPQYNPQTLNYVRGNITVGWTVTDQSL SGVVLAEFFQEGYLKGSLTSPTSLGYTFPWDTRVLANRSYSLTLRATDRAGNVATHTRSLIVDNAPPTSVLTAPANGDVV SGVVTLAANASDSQSLYYVAFEIDGVIQTPYSTTAPFTRTWDTTGKSGTHVIVAIAYDRVGNSQRSNAVTVTVP >Mature_554_residues MRIVSKGARGLSALLGAAALASIGCGDVPDASESSQAELLQTSAPLDCLSSIKPERELLIQDATVLNDPVRTAWSGAMPM VRGAADGAWSFGRRLAEMSGDVAPSEFVRDRLQRGAEQDAVARTLVPQLLEAWPRLADGTLDMTKAPMRLKAIVNHVDTH NSDRHSAGEGHLVFDAIDADGKPLPLTATLVYDLHASKPSDALHWARQWHALATQTPGTEAFNTTLQAVTDRFTAAPGRL QVSTTESVLDSARSKSTDARRLAKDFGNLLCTDSAAPTVTLLSPSPDSAVRGTITLTASAYDDVGVTRVDFFSGSTLIAS DAQPPFIVDWDTTTSPSGTRALTAQAFDADGNMGISDPVSVMVDNFAPIILSGTPQYNPQTLNYVRGNITVGWTVTDQSL SGVVLAEFFQEGYLKGSLTSPTSLGYTFPWDTRVLANRSYSLTLRATDRAGNVATHTRSLIVDNAPPTSVLTAPANGDVV SGVVTLAANASDSQSLYYVAFEIDGVIQTPYSTTAPFTRTWDTTGKSGTHVIVAIAYDRVGNSQRSNAVTVTVP
Specific function: Unknown
COG id: COG3979
COG function: function code R; Uncharacterized protein contain chitin-binding domain type 3
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58717; Mature: 58717
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIVSKGARGLSALLGAAALASIGCGDVPDASESSQAELLQTSAPLDCLSSIKPERELLI CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHEE QDATVLNDPVRTAWSGAMPMVRGAADGAWSFGRRLAEMSGDVAPSEFVRDRLQRGAEQDA HHHHHHCCCHHHHHCCCCCCEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHH VARTLVPQLLEAWPRLADGTLDMTKAPMRLKAIVNHVDTHNSDRHSAGEGHLVFDAIDAD HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCC GKPLPLTATLVYDLHASKPSDALHWARQWHALATQTPGTEAFNTTLQAVTDRFTAAPGRL CCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEE QVSTTESVLDSARSKSTDARRLAKDFGNLLCTDSAAPTVTLLSPSPDSAVRGTITLTASA EEECHHHHHHHHHCCCHHHHHHHHHHCCEEECCCCCCEEEEECCCCCCCEEEEEEEEEEC YDDVGVTRVDFFSGSTLIASDAQPPFIVDWDTTTSPSGTRALTAQAFDADGNMGISDPVS CCCCCCEEEEEECCCEEEECCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCHH VMVDNFAPIILSGTPQYNPQTLNYVRGNITVGWTVTDQSLSGVVLAEFFQEGYLKGSLTS HHHCCCCCEEEECCCCCCCCEEEEEECCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCC PTSLGYTFPWDTRVLANRSYSLTLRATDRAGNVATHTRSLIVDNAPPTSVLTAPANGDVV CCCCCEECCCCCCEEECCCEEEEEEECCCCCCEECCCEEEEECCCCCCCEEECCCCCCCE SGVVTLAANASDSQSLYYVAFEIDGVIQTPYSTTAPFTRTWDTTGKSGTHVIVAIAYDRV EEEEEEEECCCCCCEEEEEEEEECCEEECCCCCCCCCEEECCCCCCCCCEEEEEEEEECC GNSQRSNAVTVTVP CCCCCCCEEEEEEC >Mature Secondary Structure MRIVSKGARGLSALLGAAALASIGCGDVPDASESSQAELLQTSAPLDCLSSIKPERELLI CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHEE QDATVLNDPVRTAWSGAMPMVRGAADGAWSFGRRLAEMSGDVAPSEFVRDRLQRGAEQDA HHHHHHCCCHHHHHCCCCCCEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHH VARTLVPQLLEAWPRLADGTLDMTKAPMRLKAIVNHVDTHNSDRHSAGEGHLVFDAIDAD HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCC GKPLPLTATLVYDLHASKPSDALHWARQWHALATQTPGTEAFNTTLQAVTDRFTAAPGRL CCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEE QVSTTESVLDSARSKSTDARRLAKDFGNLLCTDSAAPTVTLLSPSPDSAVRGTITLTASA EEECHHHHHHHHHCCCHHHHHHHHHHCCEEECCCCCCEEEEECCCCCCCEEEEEEEEEEC YDDVGVTRVDFFSGSTLIASDAQPPFIVDWDTTTSPSGTRALTAQAFDADGNMGISDPVS CCCCCCEEEEEECCCEEEECCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCHH VMVDNFAPIILSGTPQYNPQTLNYVRGNITVGWTVTDQSLSGVVLAEFFQEGYLKGSLTS HHHCCCCCEEEECCCCCCCCEEEEEECCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCC PTSLGYTFPWDTRVLANRSYSLTLRATDRAGNVATHTRSLIVDNAPPTSVLTAPANGDVV CCCCCEECCCCCCEEECCCEEEEEEECCCCCCEECCCEEEEECCCCCCCEEECCCCCCCE SGVVTLAANASDSQSLYYVAFEIDGVIQTPYSTTAPFTRTWDTTGKSGTHVIVAIAYDRV EEEEEEEECCCCCCEEEEEEEEECCEEECCCCCCCCCEEECCCCCCCCCEEEEEEEEECC GNSQRSNAVTVTVP CCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA