Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

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The map label for this gene is oppC [H]

Identifier: 108761963

GI number: 108761963

Start: 2351752

End: 2352564

Strand: Direct

Name: oppC [H]

Synonym: MXAN_2020

Alternate gene names: 108761963

Gene position: 2351752-2352564 (Clockwise)

Preceding gene: 108758205

Following gene: 108763937

Centisome position: 25.73

GC content: 74.42

Gene sequence:

>813_bases
ATGAGCCGCGTTCCCGTGCGCGCCCGCGTCGGCCTGGTGCTCCTCGTGGGCCTGGGCCTGCTCAGCCTCGTGGCGGGGCG
GCTCTTCCCGGAGGCCCTGTCCAGCACCTGTCCGCTGGGCATGGACCCCACGCGCCCGGACCGCACCGTCTGCGAACTCG
CCTTTGGCGGGCTCTGGGTCTCCCTCGCTGTGGGGCTCGCTGCGGGCGCGCTCTCCACGTTCATCGGGCTCGCCGTGGCC
GCCGTGGCGCGGCTGTCCGGCGGCGCGGTGGAGCAGACGCTGCTGCGCGCCGTGGACGCCGTCTTCGCCCTGCCGGACGT
GCTGGTGGTGATGGTGCTCCAACTCGCGGGGCAGTCGCTCTCCGACGCGGGAGCGGGCGGCGGCCTGGGCCCCTTCGGCC
TGATGGTCGTCTCGCTGGCCCTGGTGGGCTGGGCGGGGCCCGCGCGCATGTTCCGCAACCGCCTGGCGACGCTCGAATCC
CAGGAGTACGTGGCCGCGTCCCGGGCGCTCGGTGGAGGCGGCCTGCATCTGCTGCGCGTCCACCTGTGGCCCGCGCTTCG
GCCCTTCGCGCTCGCGGTGTTCCTGTCGCGGCTTCCCGCCGCCATCCTCACCGAGTCCACCGTGAGCTTCTTCGGCATCG
CCCGGATGGAGCCCATGTCCCTGGGCCGCTACCTGGGCACCAGCTACGCGGCCCTCATCTACGAGGGCGGCGGCCGGGTG
GTGTTGCCCGCCTGGGCGCTGCTCGTGCTGCTGGTGCTCGGTGCCTCGCTCGCCTCCCAGGCGCTTTCCGGGCCCCCCCG
CCGGGTGACCTGA

Upstream 100 bases:

>100_bases
TCGTCGCCACCACCACCTTCGCGGCCCTGCTCGTCATCGTGAGCCTCGCGGTGGAGGTGCTGCGCTACGCCGTGGACCCG
CGCTCCCGGGAGGCCTCGGC

Downstream 100 bases:

>100_bases
CGAGCGCTGGAGTTGGGGCCCCGGCCCCGGTGTGGCGTGGAATTCCCAACGTTGGGGGAGGGGTTGTCCACACACGGAAA
CCTTTTGCCCACATTGGTGC

Product: putative oligopeptide ABC transporter permease

Products: NA

Alternate protein names: Stage 0 sporulation protein KC [H]

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MSRVPVRARVGLVLLVGLGLLSLVAGRLFPEALSSTCPLGMDPTRPDRTVCELAFGGLWVSLAVGLAAGALSTFIGLAVA
AVARLSGGAVEQTLLRAVDAVFALPDVLVVMVLQLAGQSLSDAGAGGGLGPFGLMVVSLALVGWAGPARMFRNRLATLES
QEYVAASRALGGGGLHLLRVHLWPALRPFALAVFLSRLPAAILTESTVSFFGIARMEPMSLGRYLGTSYAALIYEGGGRV
VLPAWALLVLLVLGASLASQALSGPPRRVT

Sequences:

>Translated_270_residues
MSRVPVRARVGLVLLVGLGLLSLVAGRLFPEALSSTCPLGMDPTRPDRTVCELAFGGLWVSLAVGLAAGALSTFIGLAVA
AVARLSGGAVEQTLLRAVDAVFALPDVLVVMVLQLAGQSLSDAGAGGGLGPFGLMVVSLALVGWAGPARMFRNRLATLES
QEYVAASRALGGGGLHLLRVHLWPALRPFALAVFLSRLPAAILTESTVSFFGIARMEPMSLGRYLGTSYAALIYEGGGRV
VLPAWALLVLLVLGASLASQALSGPPRRVT
>Mature_269_residues
SRVPVRARVGLVLLVGLGLLSLVAGRLFPEALSSTCPLGMDPTRPDRTVCELAFGGLWVSLAVGLAAGALSTFIGLAVAA
VARLSGGAVEQTLLRAVDAVFALPDVLVVMVLQLAGQSLSDAGAGGGLGPFGLMVVSLALVGWAGPARMFRNRLATLESQ
EYVAASRALGGGGLHLLRVHLWPALRPFALAVFLSRLPAAILTESTVSFFGIARMEPMSLGRYLGTSYAALIYEGGGRVV
LPAWALLVLLVLGASLASQALSGPPRRVT

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 27835; Mature: 27704

Theoretical pI: Translated: 10.93; Mature: 10.93

Prosite motif: PS00626 RCC1_2 ; PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRVPVRARVGLVLLVGLGLLSLVAGRLFPEALSSTCPLGMDPTRPDRTVCELAFGGLWV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
SLAVGLAAGALSTFIGLAVAAVARLSGGAVEQTLLRAVDAVFALPDVLVVMVLQLAGQSL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SDAGAGGGLGPFGLMVVSLALVGWAGPARMFRNRLATLESQEYVAASRALGGGGLHLLRV
CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
HLWPALRPFALAVFLSRLPAAILTESTVSFFGIARMEPMSLGRYLGTSYAALIYEGGGRV
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEECCCCE
VLPAWALLVLLVLGASLASQALSGPPRRVT
EHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SRVPVRARVGLVLLVGLGLLSLVAGRLFPEALSSTCPLGMDPTRPDRTVCELAFGGLWV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
SLAVGLAAGALSTFIGLAVAAVARLSGGAVEQTLLRAVDAVFALPDVLVVMVLQLAGQSL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SDAGAGGGLGPFGLMVVSLALVGWAGPARMFRNRLATLESQEYVAASRALGGGGLHLLRV
CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
HLWPALRPFALAVFLSRLPAAILTESTVSFFGIARMEPMSLGRYLGTSYAALIYEGGGRV
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEECCCCE
VLPAWALLVLLVLGASLASQALSGPPRRVT
EHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]