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The map label for this gene is ybhR [C]

Identifier: 108761959

GI number: 108761959

Start: 6618392

End: 6619216

Strand: Reverse

Name: ybhR [C]

Synonym: MXAN_5316

Alternate gene names: 108761959

Gene position: 6619216-6618392 (Counterclockwise)

Preceding gene: 108762202

Following gene: 108759173

Centisome position: 72.42

GC content: 71.03

Gene sequence:

>825_bases
ATGAACGCCGGGGCTCCGGCCGTGTCGTCGCCACCCGGAACGCTCGCGCTCCAGTGGGCGACGGTGCGGGTGCTGATGAT
GCGCGACATCGTCCGCTTCTTCCGCCAGCCCTCCCGGGTGGTGGGCGCGCTCGCGCAGCCCGTCCTCTTCTGGTTCGTCA
TCGGCTCCGGCTTCGCGGGCTCCTTCCGCGTGGAGGGCGCGCAGGGCTTGGGCTACCAGCAGTTCTTCTTCCCGGGCGTC
GTCACCATGGTGCTGCTGTTCAGCGCCATCTTCGCGACGATTACCGTCATCGAGGACCGCAAGGAGGGCTTCCTCCAGGC
GGTGCTCGCCGGGCCGGGCTCGCGGCTGGCGGTGGTGCTGGGCAAGGCGCTGGGCTCGTCCGCCATCGCGCTGCTGCAGG
CGTCGCTGTTCCTGTTGCTGGCGCCGCTGGCGGGTGTGAGCGCGGCCACGCTGAACGTGCCGCTGCTGCTGTCCGTCATG
GTGCTGTCGGCGCTGGCGCTGACGGGCATGGGCATGTCGCTGGCGTGGTGGGTGCGCTCCAGTGCGGGCTACCACGCGGT
GATGAGCATCGTCATGCTGCCCATGTGGGTGCTGTCCGGCGCCGTGTTCCCGCTCAAGGGCGCGGACACCTGGCTGGCCT
GGGTGATGCGGCTCAACCCGATGCGCTACTCCGTGGAGGGCGTGCGGCGGGCGCTGCACGGCGCGGAGGCGTCGGTGGCG
CTGGGCGCGTCGTCGTCCTCGGCGGGGTTGGAAGTGCCGGTGCTGGTGGCGTTCGCCGCGGTGTTCATCGGGCTGGCTTC
CTTCAGCGTCAGCCGCCGGGAGTAG

Upstream 100 bases:

>100_bases
TCCAATTGACGGGGCGCGCGCTGGGCGCGGACGTGCCCACCGCTGAACCCGCGCCGAGGAGACGTCGATGAGCGCCGAGC
TGTCCGCCGCCCCCGAACCG

Downstream 100 bases:

>100_bases
ACGGCGGCCGTTCGCGGTGTCCCGGTGGGTTGGACAGGCGCTGCCCCTTTCGCTACGAGGTGGGCAGACGCATCACCTGA
CTTCCCGAGGAGATTGCACG

Product: putative daunorubicin resistance ABC transporter permease

Products: NA

Alternate protein names: ABC Transporter Permease Protein; ABC-Type Multidrug Transport System Permease Component; Multidrug ABC Transporter Permease Protein; ABC-2 Type Transporter Superfamily; ABC Transporter; Daunorubicin Resistance ABC Transporter Membrane Protein; Daunorubicin Resistance ABC Transporter Permease; ABC Efflux Transporter Permease Protein; ABC Transporter Permease; Efflux ABC Transporter Permease Protein; ABC-Type Multidrug Transport System; ABC Efflux Pump Inner Membrane Subunit; Multidrug ABC Transporter Permease; ABC Transporter ; ABC Multidrug Efflux Pump Inner Membrane Subunit; Daunorubicin Resistance Membrane Protein; ABC-2 Transporter Component; Transporter ABC-2 Integral Membrane Protein Family; Daunorubicin Resistance Transmembrane Protein; ABC-Type Multidrug Transport System Permease; ABC Transporter Protein

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MNAGAPAVSSPPGTLALQWATVRVLMMRDIVRFFRQPSRVVGALAQPVLFWFVIGSGFAGSFRVEGAQGLGYQQFFFPGV
VTMVLLFSAIFATITVIEDRKEGFLQAVLAGPGSRLAVVLGKALGSSAIALLQASLFLLLAPLAGVSAATLNVPLLLSVM
VLSALALTGMGMSLAWWVRSSAGYHAVMSIVMLPMWVLSGAVFPLKGADTWLAWVMRLNPMRYSVEGVRRALHGAEASVA
LGASSSSAGLEVPVLVAFAAVFIGLASFSVSRRE

Sequences:

>Translated_274_residues
MNAGAPAVSSPPGTLALQWATVRVLMMRDIVRFFRQPSRVVGALAQPVLFWFVIGSGFAGSFRVEGAQGLGYQQFFFPGV
VTMVLLFSAIFATITVIEDRKEGFLQAVLAGPGSRLAVVLGKALGSSAIALLQASLFLLLAPLAGVSAATLNVPLLLSVM
VLSALALTGMGMSLAWWVRSSAGYHAVMSIVMLPMWVLSGAVFPLKGADTWLAWVMRLNPMRYSVEGVRRALHGAEASVA
LGASSSSAGLEVPVLVAFAAVFIGLASFSVSRRE
>Mature_274_residues
MNAGAPAVSSPPGTLALQWATVRVLMMRDIVRFFRQPSRVVGALAQPVLFWFVIGSGFAGSFRVEGAQGLGYQQFFFPGV
VTMVLLFSAIFATITVIEDRKEGFLQAVLAGPGSRLAVVLGKALGSSAIALLQASLFLLLAPLAGVSAATLNVPLLLSVM
VLSALALTGMGMSLAWWVRSSAGYHAVMSIVMLPMWVLSGAVFPLKGADTWLAWVMRLNPMRYSVEGVRRALHGAEASVA
LGASSSSAGLEVPVLVAFAAVFIGLASFSVSRRE

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28831; Mature: 28831

Theoretical pI: Translated: 11.56; Mature: 11.56

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAGAPAVSSPPGTLALQWATVRVLMMRDIVRFFRQPSRVVGALAQPVLFWFVIGSGFAG
CCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCC
SFRVEGAQGLGYQQFFFPGVVTMVLLFSAIFATITVIEDRKEGFLQAVLAGPGSRLAVVL
CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
GKALGSSAIALLQASLFLLLAPLAGVSAATLNVPLLLSVMVLSALALTGMGMSLAWWVRS
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHC
SAGYHAVMSIVMLPMWVLSGAVFPLKGADTWLAWVMRLNPMRYSVEGVRRALHGAEASVA
CCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEE
LGASSSSAGLEVPVLVAFAAVFIGLASFSVSRRE
ECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNAGAPAVSSPPGTLALQWATVRVLMMRDIVRFFRQPSRVVGALAQPVLFWFVIGSGFAG
CCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCC
SFRVEGAQGLGYQQFFFPGVVTMVLLFSAIFATITVIEDRKEGFLQAVLAGPGSRLAVVL
CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
GKALGSSAIALLQASLFLLLAPLAGVSAATLNVPLLLSVMVLSALALTGMGMSLAWWVRS
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHC
SAGYHAVMSIVMLPMWVLSGAVFPLKGADTWLAWVMRLNPMRYSVEGVRRALHGAEASVA
CCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEE
LGASSSSAGLEVPVLVAFAAVFIGLASFSVSRRE
ECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA