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The map label for this gene is kamD

Identifier: 108761803

GI number: 108761803

Start: 5390383

End: 5391933

Strand: Reverse

Name: kamD

Synonym: MXAN_4388

Alternate gene names: NA

Gene position: 5391933-5390383 (Counterclockwise)

Preceding gene: 108758202

Following gene: 108759718

Centisome position: 58.99

GC content: 66.6

Gene sequence:

>1551_bases
ATGCCAGGCCCGTTCATTGAAGACGCGCGGATTGAACATGCGCGCAAGCTGGCGGACGAAATCGTCAACCCGATCTTCGA
CCTCATCCGCCGTAACACCACTGTTTCAACCGAGCGCACTGTGTTGCGCTTCTTCGGCCTCTCCGGAGCTGGCGCGCGGG
GCGTGCCGCTCGCCAACCTGATGGTGGACAAGCTGAAGGCCGCCGGGGTGCTCAACAAGGGCGCCGCCTACTGGTACGGC
CGCGCGCTGCAGTTGGGTGCGAAGAGTCCGCTGGAGGCCGTGGAGCGGCTGACGGCGCTCCCCACGGAGAAGCTGGCCCC
CTTGTCGCCCGAGCAGGAGCACAACCTCCGTGAGGAGGTGCGCGCGGAAGCCCGCGCCGCGCTCGATGACCTGAAGGCCC
GCATCGCCCAGCGCGAAGAGCTCCGCAAGCAGTTCCCCATGCCCCCGGCGCCGCACAAGTACGTCATCGTGGCCACGGGC
AACATCTATGACGACGTGGACCAGGCGCGCGCGGCGGCCCAGGCGGGCGCGGACGTCATCGCCGTCATCCGGTCCACGGC
GCAGTCGCTGCTGGACTACGTGCCCCACGGCGCGACGACGGAGGGCTACGGCGGCACCTACGCCACCCAGGAGAACTTCC
GCATCATGCGCGAGGCCCTGGACGACGAGAGCCGCAAGCTCAAGCGCTACATCCAGTTGACCAACTACTCGTCCGGCCTC
TGCATGTCGGAGATCGCCTTCTGCGCGGCCTACGAGAAGCTGGACATGCTGCTCAACGACGCGATGTACGGAATCCTCTT
CCGTGACATCAACATGCGGCGCACGTTCATCGACCAGTACTTCAGCCGCCGCATCTGCGCCCTGGCCGGCATCATCATCA
ACACCGGCGAGGACAACTACATCACCACCGCGGACGCGTACGACGCGGCCCACACCGTCATCGCCAGCCAGTTCATCAAC
GAGTGCTTCGCCAAGCGCGCGGGCCTCAAGGACTGGCAGCTGGGCATCGGCCACGCGTACGAAATCGATCCGTACCGCGA
GGACACGCTGCTGCTCGAGCTGTCCCAGGCCATGCTGGTGCGCCGCTGCTTCCCGGACGCGCCGTTGAAGTACATGCCGC
CCACCAAGCACAAGGAGACGGACATCTTCTTCAGCCACACGTACGACGTGATGGCGAACCTGGTGGCCATGTGGACACGG
CAGGGCATCCAGCTGCTGGGCATGATGACGGAGGCCATGCACACGCCGCTCCTGGCGGACCGCTACGTGGCGCTCAAGTC
CGCGGCCTACATCCACCGCGCGGCGCGAGGCATCGACGAGGAGTTCACCGTCCGCGAGGACGGCAAGATCGCCAACCGCG
CGCGCGAGGTGTTCGGCCGGGCGGAGCAGTTGCTCCAGGAGTGCCGCGACGAGGGCATGGTGACCGCCATCGGCCGGGGC
CACTTCGGTGACGTGAAGCGCGAGGAGACCGGCGGCAAGGGCCTCGACGGCGTGCTGGAGAAGGCGCCGGACTATTTCAA
CCCGTTCCTGGAACTCCTGGAGGCGCAGTGA

Upstream 100 bases:

>100_bases
CTTCGGTGCTTTGAACCCGGAACCGATAATGCGGTGCGGCAACGTTGTACAGGTGCGCATCGGCGCTACCCGCTGTCGTT
CGGGCGGGTAAGGTGCGTCC

Downstream 100 bases:

>100_bases
TGCTCGGTTCAATCCTTGCCATGGTCCTCTCCGCGGGCGGCTCCGCGGATGCGCTGGCGCAGGTCCAGGTGAAGAACGTG
TCCATCCAGGTTCCCGCCTC

Product: D-lysine 5,6-aminomutase subunit alpha

Products: (3S,5S)-3,5-diaminohexanoate

Alternate protein names: D-Lysine 5 6-Aminomutase Alpha Subunit; D-Ornithine Aminomutase E Component; L-Beta-Lysine 5 6-Aminomutase Alpha Subunit; Cobalamin; D-Lysine 56-Aminomutase Alpha Subunit; D-Ornithine 4 5-Aminomutase E Subunit; Beta-Lysine 56-Aminomutase Alpha Subunit; Lysine 5 6-Aminomutase Alpha Subunit; Methylmalonyl-CoA Mutase C- Domain/Subunit

Number of amino acids: Translated: 516; Mature: 515

Protein sequence:

>516_residues
MPGPFIEDARIEHARKLADEIVNPIFDLIRRNTTVSTERTVLRFFGLSGAGARGVPLANLMVDKLKAAGVLNKGAAYWYG
RALQLGAKSPLEAVERLTALPTEKLAPLSPEQEHNLREEVRAEARAALDDLKARIAQREELRKQFPMPPAPHKYVIVATG
NIYDDVDQARAAAQAGADVIAVIRSTAQSLLDYVPHGATTEGYGGTYATQENFRIMREALDDESRKLKRYIQLTNYSSGL
CMSEIAFCAAYEKLDMLLNDAMYGILFRDINMRRTFIDQYFSRRICALAGIIINTGEDNYITTADAYDAAHTVIASQFIN
ECFAKRAGLKDWQLGIGHAYEIDPYREDTLLLELSQAMLVRRCFPDAPLKYMPPTKHKETDIFFSHTYDVMANLVAMWTR
QGIQLLGMMTEAMHTPLLADRYVALKSAAYIHRAARGIDEEFTVREDGKIANRAREVFGRAEQLLQECRDEGMVTAIGRG
HFGDVKREETGGKGLDGVLEKAPDYFNPFLELLEAQ

Sequences:

>Translated_516_residues
MPGPFIEDARIEHARKLADEIVNPIFDLIRRNTTVSTERTVLRFFGLSGAGARGVPLANLMVDKLKAAGVLNKGAAYWYG
RALQLGAKSPLEAVERLTALPTEKLAPLSPEQEHNLREEVRAEARAALDDLKARIAQREELRKQFPMPPAPHKYVIVATG
NIYDDVDQARAAAQAGADVIAVIRSTAQSLLDYVPHGATTEGYGGTYATQENFRIMREALDDESRKLKRYIQLTNYSSGL
CMSEIAFCAAYEKLDMLLNDAMYGILFRDINMRRTFIDQYFSRRICALAGIIINTGEDNYITTADAYDAAHTVIASQFIN
ECFAKRAGLKDWQLGIGHAYEIDPYREDTLLLELSQAMLVRRCFPDAPLKYMPPTKHKETDIFFSHTYDVMANLVAMWTR
QGIQLLGMMTEAMHTPLLADRYVALKSAAYIHRAARGIDEEFTVREDGKIANRAREVFGRAEQLLQECRDEGMVTAIGRG
HFGDVKREETGGKGLDGVLEKAPDYFNPFLELLEAQ
>Mature_515_residues
PGPFIEDARIEHARKLADEIVNPIFDLIRRNTTVSTERTVLRFFGLSGAGARGVPLANLMVDKLKAAGVLNKGAAYWYGR
ALQLGAKSPLEAVERLTALPTEKLAPLSPEQEHNLREEVRAEARAALDDLKARIAQREELRKQFPMPPAPHKYVIVATGN
IYDDVDQARAAAQAGADVIAVIRSTAQSLLDYVPHGATTEGYGGTYATQENFRIMREALDDESRKLKRYIQLTNYSSGLC
MSEIAFCAAYEKLDMLLNDAMYGILFRDINMRRTFIDQYFSRRICALAGIIINTGEDNYITTADAYDAAHTVIASQFINE
CFAKRAGLKDWQLGIGHAYEIDPYREDTLLLELSQAMLVRRCFPDAPLKYMPPTKHKETDIFFSHTYDVMANLVAMWTRQ
GIQLLGMMTEAMHTPLLADRYVALKSAAYIHRAARGIDEEFTVREDGKIANRAREVFGRAEQLLQECRDEGMVTAIGRGH
FGDVKREETGGKGLDGVLEKAPDYFNPFLELLEAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 5.4.3.3

Molecular weight: Translated: 57815; Mature: 57684

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGPFIEDARIEHARKLADEIVNPIFDLIRRNTTVSTERTVLRFFGLSGAGARGVPLANL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHH
MVDKLKAAGVLNKGAAYWYGRALQLGAKSPLEAVERLTALPTEKLAPLSPEQEHNLREEV
HHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHH
RAEARAALDDLKARIAQREELRKQFPMPPAPHKYVIVATGNIYDDVDQARAAAQAGADVI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCHHHH
AVIRSTAQSLLDYVPHGATTEGYGGTYATQENFRIMREALDDESRKLKRYIQLTNYSSGL
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCC
CMSEIAFCAAYEKLDMLLNDAMYGILFRDINMRRTFIDQYFSRRICALAGIIINTGEDNY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCE
ITTADAYDAAHTVIASQFINECFAKRAGLKDWQLGIGHAYEIDPYREDTLLLELSQAMLV
EEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHH
RRCFPDAPLKYMPPTKHKETDIFFSHTYDVMANLVAMWTRQGIQLLGMMTEAMHTPLLAD
HHHCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
RYVALKSAAYIHRAARGIDEEFTVREDGKIANRAREVFGRAEQLLQECRDEGMVTAIGRG
HHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC
HFGDVKREETGGKGLDGVLEKAPDYFNPFLELLEAQ
CCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCC
>Mature Secondary Structure 
PGPFIEDARIEHARKLADEIVNPIFDLIRRNTTVSTERTVLRFFGLSGAGARGVPLANL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHH
MVDKLKAAGVLNKGAAYWYGRALQLGAKSPLEAVERLTALPTEKLAPLSPEQEHNLREEV
HHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHH
RAEARAALDDLKARIAQREELRKQFPMPPAPHKYVIVATGNIYDDVDQARAAAQAGADVI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCHHHH
AVIRSTAQSLLDYVPHGATTEGYGGTYATQENFRIMREALDDESRKLKRYIQLTNYSSGL
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCC
CMSEIAFCAAYEKLDMLLNDAMYGILFRDINMRRTFIDQYFSRRICALAGIIINTGEDNY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCE
ITTADAYDAAHTVIASQFINECFAKRAGLKDWQLGIGHAYEIDPYREDTLLLELSQAMLV
EEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHH
RRCFPDAPLKYMPPTKHKETDIFFSHTYDVMANLVAMWTRQGIQLLGMMTEAMHTPLLAD
HHHCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
RYVALKSAAYIHRAARGIDEEFTVREDGKIANRAREVFGRAEQLLQECRDEGMVTAIGRG
HHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC
HFGDVKREETGGKGLDGVLEKAPDYFNPFLELLEAQ
CCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: (3S)-3,6-diaminohexanoate

Specific reaction: (3S)-3,6-diaminohexanoate = (3S,5S)-3,5-diaminohexanoate

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA