| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is hemH [H]
Identifier: 108761702
GI number: 108761702
Start: 1805525
End: 1806619
Strand: Direct
Name: hemH [H]
Synonym: MXAN_1537
Alternate gene names: 108761702
Gene position: 1805525-1806619 (Clockwise)
Preceding gene: 108757984
Following gene: 108763710
Centisome position: 19.75
GC content: 71.05
Gene sequence:
>1095_bases ATGCCAACGCCCACTTCGAAGCGAGGGCTGCTGCTCGTCAACCTGGGGACGCCGGATGCTCCGCAGACGGGGCCCGTGCG CCGCTACCTGCGCGAGTTCCTCAATGACCCGCGCGTCATCGACATCCACCCGCTGGGGCGCTGGGCGCTGCTCAACTTCA TCATCCTTCCGATGCGTCCGGCGAAGAGCGCGGAGGCGTACCGCAAAATCTGGATGAAGGAGGGCTCGCCGCTGCTCGTG TACAGCCAGGCCCTGGCGGCCCAGGTGGCCGAGCGGCTGGCGGGGGAGTACGAGGTGGTGCTGGCCATGCGGTATGGCTC GCCCTCCATCCCCGACGGCATCGCGGCGCTCAAGGCGCGCGGCGTGTCGGAGTTCACCGTGCTGCCGCTGTACCCGCAGG AGGCCGCGTCCTCCACCGCGTCCTCGCTGGCGCGCACCTATGAGGTGCTGGCCCAGTCGTGGGACGTGCCCTTCGTGCGC GCGGTGCCGGCCTTCTTCGAGCACCCAGGCTTCCTGGATGCCTTCACGGCCGTGGCGCGGCCGGTGATTGACGACGCGCG CGCCGACTACGTCCTCTTCAGCTTCCATGGCCTGCCGGAGCGGCACATGCGCAAGAGCGACCCCACGGGGACGCACTGCC TGTCCACCGCCTCGTGCTGCGACGCCATGACGGACGCCAACCGCCACTGCTACCGCGCGCAGAGCTACGCGACGGCGCGG GGGCTGGCCCAGCGGCTGGGCCTGCCGGCGGAGGGGTGGAGCGTGTCCTTCCAGTCGCGGCTGGGCCGCACGCCGTGGGT GAAGCCGTACACGGACGTGGTGTTGCCGGAGCTGGCGAAGAAGGGCGTGAAGCGCCTGGCGGTGATGTGCCCGGCCTTCG TGGCGGACTGCCTGGAGACGCTGGAGGAGATTGGCCTCCGCGCGCGGGAGCAGTTCCTGGAGGCGGGAGGGGAGTCGCTG ACGTTGGTCCCCTCCCTCAACGCCCACCCGGCCTGGGTGGACGCCGTGGTGCGCATGGTGCGCGAGTCGGACGGGCCGCC TACTGCTGTGGCTGGGCCGTTGGCGTCGGCGCGGGAGCCGATTCCACCGCGGTGA
Upstream 100 bases:
>100_bases GCACCATGCGCGGCACCTATGACATGGTGCGGCCGGACGGCACGCACTTCGAAGCGCGCATCGCCGAGTTCGCGCTCACC CTTCCCAACTCCCTGCACTG
Downstream 100 bases:
>100_bases GGCGCAGCTTCAGGGCGCCGGTGGGCACCTGGAGCGCGGCGGTGGGGAAGCCGCCCTTCGTCACCGACGTGACGGTGCCT TCCCACGAGCGCCACCGCCC
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MPTPTSKRGLLLVNLGTPDAPQTGPVRRYLREFLNDPRVIDIHPLGRWALLNFIILPMRPAKSAEAYRKIWMKEGSPLLV YSQALAAQVAERLAGEYEVVLAMRYGSPSIPDGIAALKARGVSEFTVLPLYPQEAASSTASSLARTYEVLAQSWDVPFVR AVPAFFEHPGFLDAFTAVARPVIDDARADYVLFSFHGLPERHMRKSDPTGTHCLSTASCCDAMTDANRHCYRAQSYATAR GLAQRLGLPAEGWSVSFQSRLGRTPWVKPYTDVVLPELAKKGVKRLAVMCPAFVADCLETLEEIGLRAREQFLEAGGESL TLVPSLNAHPAWVDAVVRMVRESDGPPTAVAGPLASAREPIPPR
Sequences:
>Translated_364_residues MPTPTSKRGLLLVNLGTPDAPQTGPVRRYLREFLNDPRVIDIHPLGRWALLNFIILPMRPAKSAEAYRKIWMKEGSPLLV YSQALAAQVAERLAGEYEVVLAMRYGSPSIPDGIAALKARGVSEFTVLPLYPQEAASSTASSLARTYEVLAQSWDVPFVR AVPAFFEHPGFLDAFTAVARPVIDDARADYVLFSFHGLPERHMRKSDPTGTHCLSTASCCDAMTDANRHCYRAQSYATAR GLAQRLGLPAEGWSVSFQSRLGRTPWVKPYTDVVLPELAKKGVKRLAVMCPAFVADCLETLEEIGLRAREQFLEAGGESL TLVPSLNAHPAWVDAVVRMVRESDGPPTAVAGPLASAREPIPPR >Mature_363_residues PTPTSKRGLLLVNLGTPDAPQTGPVRRYLREFLNDPRVIDIHPLGRWALLNFIILPMRPAKSAEAYRKIWMKEGSPLLVY SQALAAQVAERLAGEYEVVLAMRYGSPSIPDGIAALKARGVSEFTVLPLYPQEAASSTASSLARTYEVLAQSWDVPFVRA VPAFFEHPGFLDAFTAVARPVIDDARADYVLFSFHGLPERHMRKSDPTGTHCLSTASCCDAMTDANRHCYRAQSYATARG LAQRLGLPAEGWSVSFQSRLGRTPWVKPYTDVVLPELAKKGVKRLAVMCPAFVADCLETLEEIGLRAREQFLEAGGESLT LVPSLNAHPAWVDAVVRMVRESDGPPTAVAGPLASAREPIPPR
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499021, Length=349, Percent_Identity=23.7822349570201, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI60499025, Length=348, Percent_Identity=23.8505747126437, Blast_Score=78, Evalue=2e-14, Organism=Escherichia coli, GI1786681, Length=336, Percent_Identity=38.6904761904762, Blast_Score=228, Evalue=6e-61, Organism=Drosophila melanogaster, GI17864156, Length=356, Percent_Identity=22.4719101123595, Blast_Score=83, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 39846; Mature: 39715
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTPTSKRGLLLVNLGTPDAPQTGPVRRYLREFLNDPRVIDIHPLGRWALLNFIILPMRP CCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCC AKSAEAYRKIWMKEGSPLLVYSQALAAQVAERLAGEYEVVLAMRYGSPSIPDGIAALKAR CCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHC GVSEFTVLPLYPQEAASSTASSLARTYEVLAQSWDVPFVRAVPAFFEHPGFLDAFTAVAR CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHH PVIDDARADYVLFSFHGLPERHMRKSDPTGTHCLSTASCCDAMTDANRHCYRAQSYATAR HHHHHCCCCEEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH GLAQRLGLPAEGWSVSFQSRLGRTPWVKPYTDVVLPELAKKGVKRLAVMCPAFVADCLET HHHHHCCCCCCCCCEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEEIGLRAREQFLEAGGESLTLVPSLNAHPAWVDAVVRMVRESDGPPTAVAGPLASAREP HHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHCCHHHCCCC IPPR CCCC >Mature Secondary Structure PTPTSKRGLLLVNLGTPDAPQTGPVRRYLREFLNDPRVIDIHPLGRWALLNFIILPMRP CCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCC AKSAEAYRKIWMKEGSPLLVYSQALAAQVAERLAGEYEVVLAMRYGSPSIPDGIAALKAR CCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHC GVSEFTVLPLYPQEAASSTASSLARTYEVLAQSWDVPFVRAVPAFFEHPGFLDAFTAVAR CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHH PVIDDARADYVLFSFHGLPERHMRKSDPTGTHCLSTASCCDAMTDANRHCYRAQSYATAR HHHHHCCCCEEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH GLAQRLGLPAEGWSVSFQSRLGRTPWVKPYTDVVLPELAKKGVKRLAVMCPAFVADCLET HHHHHCCCCCCCCCEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEEIGLRAREQFLEAGGESLTLVPSLNAHPAWVDAVVRMVRESDGPPTAVAGPLASAREP HHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHCCHHHCCCC IPPR CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA