| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is cotH [H]
Identifier: 108761618
GI number: 108761618
Start: 2823675
End: 2825480
Strand: Reverse
Name: cotH [H]
Synonym: MXAN_2420
Alternate gene names: 108761618
Gene position: 2825480-2823675 (Counterclockwise)
Preceding gene: 108762084
Following gene: 108757499
Centisome position: 30.91
GC content: 67.11
Gene sequence:
>1806_bases TTGATGACTCCTTCTCGATTGCTGCTGTGTCTGCCGCTGCTGAGCCTGTGGGCCTGTGATGGACTCCAGGCGGAGCGGCC ACCGCTCATCCAGGACCCTCCGGGCGTGGAGAATCCGCAAACGCCCCCTGGCGAGGAGGAGCCGCCGCCGACGCAGCCGC CACCGGTGGACCCGCCTCCCATCGACCCGCCGCCGGTGGATCCACCTCCGGAGCCGCCACCGCCCGTGCCGGAGACGGAG CGGCCCTTTGTGATGCCGCCCGTGCAGACGTCGGTGCCGCAGTACGAGCTCATCATCCCCGAAGAGACGATGCGGATGTT CGAGGCGGACCCTTGGACGCCGGAGCAGGACGGCCTCTTCAAGGCGAACGGGACGACGTACCGCGTGCAGGTGCGCCTGC GGGGCGCCTCCGCGCGCTTCTTCCCGAAGAAGAGCTGGAACGTGAGCTTCGAGGACGGCGTGCGCTTCGAGGGGAGGACG TCACTCAACCTCGTGGCCGAGTATGCGGACGCGACGCTGCTGGCGGAGAAGATTGCCTTCGACCTGCTGGAGGCCATGCG CGTCCCCGCGTCGAAGGGCACGCTGGTGCGGCTCAACGTCAACGGCGCGTACCAGGGCGTGTTCCTGGAAATCGAGCAGG TGAACAAGGCGTTCCTGCGGGCGCACTCCTACGCCGACACGGATGGAACCATCTACCGGTGTGGCTGGAAGGACTGCGAA TTCAAGATGGCGAAGGTGCCGTACCAGGGTGACTGGGCGAAGAAGACGAACGAGTCCCAGCCGGACGACAAGCTCTGGGA GATGGTGGGCGCCATCAACCACACGCCCGAGCCCCAGTTCGTCAGTGAAATGGAGAAGCGCTTCGAGCTGGAGCACTACC TGCGCGCCATGGTGATGGACGCGCTGATGTCCAACAACTACGTGGAGGACTCGGAGAGCTACTTCATCTACGACCGCGCG GTGGCCAGGTGGTCCTACGTCCCGTGGGACCTCAACAACGTGGACTCGCGCTGGTGGTACCCCATCAGCGTGGAGGAGAT GAGCCAGAGCACGCGCAACATGCGCCATCCGCTGTTCAGCTTCACCCTCACCGACGCCTGGGTGGCGAAGATGTACGAGC AGCGCAAGCTGGAGACGGCCTCGTACCCCGGCTACCTGCCGGTGTTCTCCAACCTGGCCACCCGCGTGGTGATGAACCCC GTGCTGCGCGAGCGGCTGGAGGCGCGGCTGGACAAGGCGATGGACGAGCTCTTCACCAGCGAGGTGATGGGCGCGCACAT CGACAAGCTGCACGCGCTCATCGACCCGCACATGCGTGACGACCCCTTCATGGACTACGGCCGCTTCACCGCGGGCCGCG CCTATCTGAAGCGCTACGTGCGCGAGCGCCGCGACTTCATCTTCAAGGAGCTGGAGCGGCTCGCGCAGCAGCAACCCACG TTGGTGCTGGAGGCCGTCCACCCGCGTGAAGGCTGGGTGGAGGTGGGCAACCGCACCTCGGCGCCCCTTTCCCTGGCGGG CATGGTGCTGACGACGCAACTGCGCATCAGCCTGGCGCAGAGCCCCAGCCACCTGCACACGCAGGTGCGTGCCCCCTTCG GCGCGGTGCTGCCGGAGCTGACGGTGGCCCCCAGGCAGCGCGTCCGCCTCAACGCCGCGCAGTTGGGCATCCAGATGCCC GCCAACGGCGAGATTGGCCTCTTCGACGGGCGCTCCGTGGTGGGCGTGAAGGACCTGCTCTTCTACGGCGACCTGGGCGC GGGCAAGCGCTACGAGCGCGGCTCGCGGGGCTGGGAAGTGCGCTGA
Upstream 100 bases:
>100_bases CCTTGCACGCGACGGTGGGGGCCTGAATGCCGACTCAAGCGTTCGCTCTCCACCAAAAAGGGGCCCTGGAGGCGGGCACA ACCGTTGCTTTGCGCCGGGA
Downstream 100 bases:
>100_bases GCGCGGCGGCGAGCCGCACCTGAGCGCGGCGCTCCTGTCCTCCGGGGGCGCCGCGCTGCGTTTCAGGGTCGCATGCGGAC CTCCAGCGTCCGCTTCGCGC
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 601; Mature: 601
Protein sequence:
>601_residues MMTPSRLLLCLPLLSLWACDGLQAERPPLIQDPPGVENPQTPPGEEEPPPTQPPPVDPPPIDPPPVDPPPEPPPPVPETE RPFVMPPVQTSVPQYELIIPEETMRMFEADPWTPEQDGLFKANGTTYRVQVRLRGASARFFPKKSWNVSFEDGVRFEGRT SLNLVAEYADATLLAEKIAFDLLEAMRVPASKGTLVRLNVNGAYQGVFLEIEQVNKAFLRAHSYADTDGTIYRCGWKDCE FKMAKVPYQGDWAKKTNESQPDDKLWEMVGAINHTPEPQFVSEMEKRFELEHYLRAMVMDALMSNNYVEDSESYFIYDRA VARWSYVPWDLNNVDSRWWYPISVEEMSQSTRNMRHPLFSFTLTDAWVAKMYEQRKLETASYPGYLPVFSNLATRVVMNP VLRERLEARLDKAMDELFTSEVMGAHIDKLHALIDPHMRDDPFMDYGRFTAGRAYLKRYVRERRDFIFKELERLAQQQPT LVLEAVHPREGWVEVGNRTSAPLSLAGMVLTTQLRISLAQSPSHLHTQVRAPFGAVLPELTVAPRQRVRLNAAQLGIQMP ANGEIGLFDGRSVVGVKDLLFYGDLGAGKRYERGSRGWEVR
Sequences:
>Translated_601_residues MMTPSRLLLCLPLLSLWACDGLQAERPPLIQDPPGVENPQTPPGEEEPPPTQPPPVDPPPIDPPPVDPPPEPPPPVPETE RPFVMPPVQTSVPQYELIIPEETMRMFEADPWTPEQDGLFKANGTTYRVQVRLRGASARFFPKKSWNVSFEDGVRFEGRT SLNLVAEYADATLLAEKIAFDLLEAMRVPASKGTLVRLNVNGAYQGVFLEIEQVNKAFLRAHSYADTDGTIYRCGWKDCE FKMAKVPYQGDWAKKTNESQPDDKLWEMVGAINHTPEPQFVSEMEKRFELEHYLRAMVMDALMSNNYVEDSESYFIYDRA VARWSYVPWDLNNVDSRWWYPISVEEMSQSTRNMRHPLFSFTLTDAWVAKMYEQRKLETASYPGYLPVFSNLATRVVMNP VLRERLEARLDKAMDELFTSEVMGAHIDKLHALIDPHMRDDPFMDYGRFTAGRAYLKRYVRERRDFIFKELERLAQQQPT LVLEAVHPREGWVEVGNRTSAPLSLAGMVLTTQLRISLAQSPSHLHTQVRAPFGAVLPELTVAPRQRVRLNAAQLGIQMP ANGEIGLFDGRSVVGVKDLLFYGDLGAGKRYERGSRGWEVR >Mature_601_residues MMTPSRLLLCLPLLSLWACDGLQAERPPLIQDPPGVENPQTPPGEEEPPPTQPPPVDPPPIDPPPVDPPPEPPPPVPETE RPFVMPPVQTSVPQYELIIPEETMRMFEADPWTPEQDGLFKANGTTYRVQVRLRGASARFFPKKSWNVSFEDGVRFEGRT SLNLVAEYADATLLAEKIAFDLLEAMRVPASKGTLVRLNVNGAYQGVFLEIEQVNKAFLRAHSYADTDGTIYRCGWKDCE FKMAKVPYQGDWAKKTNESQPDDKLWEMVGAINHTPEPQFVSEMEKRFELEHYLRAMVMDALMSNNYVEDSESYFIYDRA VARWSYVPWDLNNVDSRWWYPISVEEMSQSTRNMRHPLFSFTLTDAWVAKMYEQRKLETASYPGYLPVFSNLATRVVMNP VLRERLEARLDKAMDELFTSEVMGAHIDKLHALIDPHMRDDPFMDYGRFTAGRAYLKRYVRERRDFIFKELERLAQQQPT LVLEAVHPREGWVEVGNRTSAPLSLAGMVLTTQLRISLAQSPSHLHTQVRAPFGAVLPELTVAPRQRVRLNAAQLGIQMP ANGEIGLFDGRSVVGVKDLLFYGDLGAGKRYERGSRGWEVR
Specific function: Involved in the assembly of several proteins in the inner and outer layer of the spore coat. Stabilizes CotC and CotU in the mother cell compartment of sporulating cells and promotes the assembly of both early and late forms of CotC-related polypeptides o
COG id: COG5337
COG function: function code M; Spore coat assembly protein
Gene ontology:
Cell location: Spore wall, spore coat [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CotH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014867 [H]
Pfam domain/function: PF08757 CotH [H]
EC number: NA
Molecular weight: Translated: 68481; Mature: 68481
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTPSRLLLCLPLLSLWACDGLQAERPPLIQDPPGVENPQTPPGEEEPPPTQPPPVDPPP CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC IDPPPVDPPPEPPPPVPETERPFVMPPVQTSVPQYELIIPEETMRMFEADPWTPEQDGLF CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEECCHHHHHHHCCCCCCCCCCCEE KANGTTYRVQVRLRGASARFFPKKSWNVSFEDGVRFEGRTSLNLVAEYADATLLAEKIAF EECCCEEEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH DLLEAMRVPASKGTLVRLNVNGAYQGVFLEIEQVNKAFLRAHSYADTDGTIYRCGWKDCE HHHHHHHCCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCEEEECCCCCC FKMAKVPYQGDWAKKTNESQPDDKLWEMVGAINHTPEPQFVSEMEKRFELEHYLRAMVMD EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH ALMSNNYVEDSESYFIYDRAVARWSYVPWDLNNVDSRWWYPISVEEMSQSTRNMRHPLFS HHHCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCHHE FTLTDAWVAKMYEQRKLETASYPGYLPVFSNLATRVVMNPVLRERLEARLDKAMDELFTS EEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVMGAHIDKLHALIDPHMRDDPFMDYGRFTAGRAYLKRYVRERRDFIFKELERLAQQQPT HHHHHHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LVLEAVHPREGWVEVGNRTSAPLSLAGMVLTTQLRISLAQSPSHLHTQVRAPFGAVLPEL EEEEECCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHCCCC TVAPRQRVRLNAAQLGIQMPANGEIGLFDGRSVVGVKDLLFYGDLGAGKRYERGSRGWEV CCCCHHHHEEEHHHHCEECCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC R C >Mature Secondary Structure MMTPSRLLLCLPLLSLWACDGLQAERPPLIQDPPGVENPQTPPGEEEPPPTQPPPVDPPP CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC IDPPPVDPPPEPPPPVPETERPFVMPPVQTSVPQYELIIPEETMRMFEADPWTPEQDGLF CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEECCHHHHHHHCCCCCCCCCCCEE KANGTTYRVQVRLRGASARFFPKKSWNVSFEDGVRFEGRTSLNLVAEYADATLLAEKIAF EECCCEEEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH DLLEAMRVPASKGTLVRLNVNGAYQGVFLEIEQVNKAFLRAHSYADTDGTIYRCGWKDCE HHHHHHHCCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCEEEECCCCCC FKMAKVPYQGDWAKKTNESQPDDKLWEMVGAINHTPEPQFVSEMEKRFELEHYLRAMVMD EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH ALMSNNYVEDSESYFIYDRAVARWSYVPWDLNNVDSRWWYPISVEEMSQSTRNMRHPLFS HHHCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCHHE FTLTDAWVAKMYEQRKLETASYPGYLPVFSNLATRVVMNPVLRERLEARLDKAMDELFTS EEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVMGAHIDKLHALIDPHMRDDPFMDYGRFTAGRAYLKRYVRERRDFIFKELERLAQQQPT HHHHHHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LVLEAVHPREGWVEVGNRTSAPLSLAGMVLTTQLRISLAQSPSHLHTQVRAPFGAVLPEL EEEEECCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHCCCC TVAPRQRVRLNAAQLGIQMPANGEIGLFDGRSVVGVKDLLFYGDLGAGKRYERGSRGWEV CCCCHHHHEEEHHHHCEECCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8755863; 8991897; 9353933; 9384377; 7814326; 10198031 [H]