| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108761608
Identifier: 108761608
GI number: 108761608
Start: 224504
End: 226126
Strand: Reverse
Name: 108761608
Synonym: MXAN_0185
Alternate gene names: NA
Gene position: 226126-224504 (Counterclockwise)
Preceding gene: 108762433
Following gene: 108762456
Centisome position: 2.47
GC content: 67.53
Gene sequence:
>1623_bases ATGACAGCCCTGGACCGACTCGCGGACGGCTTGGGTTTCGTCACATCCCGGCCAGATTGCGCGACCGCGGCACCCCACCG CAGCCAGCCACCGCAACAAGGAGTGAGTATGCGTCTTCGCGCACAAAGCCTTCCTTTGCTGTTGTCCGCCGTTTCAGGCA TCGCCACCCTCGGATGCGGCATCGAAGCACCCTACCCGGTTCGCCTGGAGCACGGGGAGGTGGAAGCCGCCGCCAGCCGT GAAGACACCGCGCGCCTGGGTGCGGCCTCCGGCTGGGACCTGTGCGACACGACGGCCCGGCTCGTGCGGGACATCATCCC GGGCGCGGGGCACTCCCATCCGCAGGACCTCACCCACGGCAACGAGGTCCTCCTCTTCTCCGCCACGGATGGCGTGGGGG GCCGTGAGCCCTGGCTGAGTTCGGGCGTGGCTCCGGGTACGCATCCGCTACTGGACGTGTACTCAGGAGGCCCGGGCTCG GACGCGGGCCCCTTCCTCCAGTGCGGGACGACGACGTACTTCGCGGCGAATGATGGAGTGCATGGCCGCGAACTCTGGAA GACGGATGGCAGCACCGAAGGCACGGAGCTGGTGAAGGACATCTCGCCGGGAGGGCTGGGCTCGGACCCGGAGCACCTGA CCTTCTACGACGGCGTGCTGTACTTCACGGCGAATGATGGTGTGCATGGCCGCGAGCTGTGGCGCAGCGACGGCACGGAG GAGGGAACCTTCCTCTTGCGTGACTTCAGCACGGAGGGAAACCTGGTCTCCAGCCACTTCGAGCTGGTGGCGGGGACGAA CGCCCTCTACATCAAGGTGAACATCTTCTCACCGACCGACCGCCAGTCGAGCCGGGTGCAACTGTACCGGACCGATGGCG CCAGCTTCGTGCGGCTGGTGGATGGGTCGGAAGAAAACATGCTGGGCGACCTGACGCCGGTGGGGGACAAGCTGTTCTTC ACCTGGAACTTCGATGCGCCGCAGACGCGGCTCTACGTCACCAACGGCACGTCGAGCTGGGCGCGTTACGTATACACGTT CATCGGCGCCCCCCTGGGGATGGTCGCTTACAAGAACAAGCTCTTCCTGAGCGCGGCGACTGGAGCCGGGGGGGTGGACT TCGAGCTGTGGCGCAGCGACGGAACGACATCCGGCACGATGCGGGTGAAGGACATCTACCCAGGCAGGGTGCCGTCGCAG CCGACGAACCTCACGGTGGTGAAGGACCGGCTCTTCTTCGTCGCGGATGACGGGGTGCACGGCCGCGAGCTGTGGAGCAG CGACGGGACGAGCGCGGGGACGCGGCTGCACGCCGACATCGCCGTGGGCGCTCTGGGCTCGGAGCCCGCGGAGCTGACGG CCGTGGAGGAGTACCTCTTCTTCAGCGCCCACACGGAGGCCGGAGGCCGGGAGGCGTGGGTGAGCGACACCCGCGAGCCG GGGGTGTTCGAGGTGCAGGGCATCGCGCCGGGGTCCATGCACTCGGACCCGAGCAACTTCGTTCGCTCGGGGTGGGACCT CTACTTCGTCGCCAGCGACAGCACCGACTACGGCCGCGAACTGCGCGCGCTGCGCATCCGGCCGGCGGGCATGTGTGACA TGAGCGGCAACGACGGGCTCTGA
Upstream 100 bases:
>100_bases ACTCTGGATGCTTCTTCGTCGAACAGCGCTCGCCCGGGTTGTCGGCTGAAGGTCCCCGGTCTCGTACGCCGAGGCGCCCG CGGAGGGCGACTGTCACGCA
Downstream 100 bases:
>100_bases GCGGCAGGCGCCAGGTCCCTTCTTCAAATCCAGGCCCGCTCCGAGAAAGCCACGGCACTGGACATTGCCCCCGGCGGCCC ACTACGTGCGCCGGGCATGA
Product: putative lipoprotein
Products: NA
Alternate protein names: Hyalin Repeat Protein; Hyalin Repeat-Containing Protein; Cna B Domain-Containing Protein; Quinoprotein; Cycloinulo-Oligosaccharide Fructanotransferase; Ig Family Protein; Cadherin
Number of amino acids: Translated: 540; Mature: 539
Protein sequence:
>540_residues MTALDRLADGLGFVTSRPDCATAAPHRSQPPQQGVSMRLRAQSLPLLLSAVSGIATLGCGIEAPYPVRLEHGEVEAAASR EDTARLGAASGWDLCDTTARLVRDIIPGAGHSHPQDLTHGNEVLLFSATDGVGGREPWLSSGVAPGTHPLLDVYSGGPGS DAGPFLQCGTTTYFAANDGVHGRELWKTDGSTEGTELVKDISPGGLGSDPEHLTFYDGVLYFTANDGVHGRELWRSDGTE EGTFLLRDFSTEGNLVSSHFELVAGTNALYIKVNIFSPTDRQSSRVQLYRTDGASFVRLVDGSEENMLGDLTPVGDKLFF TWNFDAPQTRLYVTNGTSSWARYVYTFIGAPLGMVAYKNKLFLSAATGAGGVDFELWRSDGTTSGTMRVKDIYPGRVPSQ PTNLTVVKDRLFFVADDGVHGRELWSSDGTSAGTRLHADIAVGALGSEPAELTAVEEYLFFSAHTEAGGREAWVSDTREP GVFEVQGIAPGSMHSDPSNFVRSGWDLYFVASDSTDYGRELRALRIRPAGMCDMSGNDGL
Sequences:
>Translated_540_residues MTALDRLADGLGFVTSRPDCATAAPHRSQPPQQGVSMRLRAQSLPLLLSAVSGIATLGCGIEAPYPVRLEHGEVEAAASR EDTARLGAASGWDLCDTTARLVRDIIPGAGHSHPQDLTHGNEVLLFSATDGVGGREPWLSSGVAPGTHPLLDVYSGGPGS DAGPFLQCGTTTYFAANDGVHGRELWKTDGSTEGTELVKDISPGGLGSDPEHLTFYDGVLYFTANDGVHGRELWRSDGTE EGTFLLRDFSTEGNLVSSHFELVAGTNALYIKVNIFSPTDRQSSRVQLYRTDGASFVRLVDGSEENMLGDLTPVGDKLFF TWNFDAPQTRLYVTNGTSSWARYVYTFIGAPLGMVAYKNKLFLSAATGAGGVDFELWRSDGTTSGTMRVKDIYPGRVPSQ PTNLTVVKDRLFFVADDGVHGRELWSSDGTSAGTRLHADIAVGALGSEPAELTAVEEYLFFSAHTEAGGREAWVSDTREP GVFEVQGIAPGSMHSDPSNFVRSGWDLYFVASDSTDYGRELRALRIRPAGMCDMSGNDGL >Mature_539_residues TALDRLADGLGFVTSRPDCATAAPHRSQPPQQGVSMRLRAQSLPLLLSAVSGIATLGCGIEAPYPVRLEHGEVEAAASRE DTARLGAASGWDLCDTTARLVRDIIPGAGHSHPQDLTHGNEVLLFSATDGVGGREPWLSSGVAPGTHPLLDVYSGGPGSD AGPFLQCGTTTYFAANDGVHGRELWKTDGSTEGTELVKDISPGGLGSDPEHLTFYDGVLYFTANDGVHGRELWRSDGTEE GTFLLRDFSTEGNLVSSHFELVAGTNALYIKVNIFSPTDRQSSRVQLYRTDGASFVRLVDGSEENMLGDLTPVGDKLFFT WNFDAPQTRLYVTNGTSSWARYVYTFIGAPLGMVAYKNKLFLSAATGAGGVDFELWRSDGTTSGTMRVKDIYPGRVPSQP TNLTVVKDRLFFVADDGVHGRELWSSDGTSAGTRLHADIAVGALGSEPAELTAVEEYLFFSAHTEAGGREAWVSDTREPG VFEVQGIAPGSMHSDPSNFVRSGWDLYFVASDSTDYGRELRALRIRPAGMCDMSGNDGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57865; Mature: 57733
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALDRLADGLGFVTSRPDCATAAPHRSQPPQQGVSMRLRAQSLPLLLSAVSGIATLGCG CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCEEEEEHHCCHHHHHHHHHHHHHCCC IEAPYPVRLEHGEVEAAASREDTARLGAASGWDLCDTTARLVRDIIPGAGHSHPQDLTHG CCCCCCEEEECCCEEECCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC NEVLLFSATDGVGGREPWLSSGVAPGTHPLLDVYSGGPGSDAGPFLQCGTTTYFAANDGV CEEEEEEECCCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCEEEECCEEEEEECCCC HGRELWKTDGSTEGTELVKDISPGGLGSDPEHLTFYDGVLYFTANDGVHGRELWRSDGTE CCHHHCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEECCEEEEEECCCCCHHHHHHCCCCC EGTFLLRDFSTEGNLVSSHFELVAGTNALYIKVNIFSPTDRQSSRVQLYRTDGASFVRLV CCEEEEEEECCCCCEECCCEEEEECCCEEEEEEEEECCCCCCCCEEEEEEECCCEEEEEE DGSEENMLGDLTPVGDKLFFTWNFDAPQTRLYVTNGTSSWARYVYTFIGAPLGMVAYKNK CCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHCCCHHHEEECCE LFLSAATGAGGVDFELWRSDGTTSGTMRVKDIYPGRVPSQPTNLTVVKDRLFFVADDGVH EEEEECCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCC GRELWSSDGTSAGTRLHADIAVGALGSEPAELTAVEEYLFFSAHTEAGGREAWVSDTREP HHHHHCCCCCCCCCEEEEEEEEECCCCCCHHHHHEEHHHEEEECCCCCCCCHHHCCCCCC GVFEVQGIAPGSMHSDPSNFVRSGWDLYFVASDSTDYGRELRALRIRPAGMCDMSGNDGL CCEEEECCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCCCEEECCCCCCC >Mature Secondary Structure TALDRLADGLGFVTSRPDCATAAPHRSQPPQQGVSMRLRAQSLPLLLSAVSGIATLGCG CHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCEEEEEHHCCHHHHHHHHHHHHHCCC IEAPYPVRLEHGEVEAAASREDTARLGAASGWDLCDTTARLVRDIIPGAGHSHPQDLTHG CCCCCCEEEECCCEEECCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC NEVLLFSATDGVGGREPWLSSGVAPGTHPLLDVYSGGPGSDAGPFLQCGTTTYFAANDGV CEEEEEEECCCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCEEEECCEEEEEECCCC HGRELWKTDGSTEGTELVKDISPGGLGSDPEHLTFYDGVLYFTANDGVHGRELWRSDGTE CCHHHCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEECCEEEEEECCCCCHHHHHHCCCCC EGTFLLRDFSTEGNLVSSHFELVAGTNALYIKVNIFSPTDRQSSRVQLYRTDGASFVRLV CCEEEEEEECCCCCEECCCEEEEECCCEEEEEEEEECCCCCCCCEEEEEEECCCEEEEEE DGSEENMLGDLTPVGDKLFFTWNFDAPQTRLYVTNGTSSWARYVYTFIGAPLGMVAYKNK CCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHCCCHHHEEECCE LFLSAATGAGGVDFELWRSDGTTSGTMRVKDIYPGRVPSQPTNLTVVKDRLFFVADDGVH EEEEECCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCC GRELWSSDGTSAGTRLHADIAVGALGSEPAELTAVEEYLFFSAHTEAGGREAWVSDTREP HHHHHCCCCCCCCCEEEEEEEEECCCCCCHHHHHEEHHHEEEECCCCCCCCHHHCCCCCC GVFEVQGIAPGSMHSDPSNFVRSGWDLYFVASDSTDYGRELRALRIRPAGMCDMSGNDGL CCEEEECCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA