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The map label for this gene is ymdB [H]

Identifier: 108761547

GI number: 108761547

Start: 3491576

End: 3492364

Strand: Reverse

Name: ymdB [H]

Synonym: MXAN_2977

Alternate gene names: 108761547

Gene position: 3492364-3491576 (Counterclockwise)

Preceding gene: 108760545

Following gene: 108762063

Centisome position: 38.21

GC content: 67.17

Gene sequence:

>789_bases
GTGAAAGTCCTCTTCATGGGGGACGTGGTGGGCCGCCCGGGTCTTCAGGCGGTCCGCACGCTCCTTCCGAGGGTCCGCGC
GCAGCACGGCGTGGACGTGGTGGTCGCCAACGCGGAGAACAGCGACCAAGGCTCGGGCATCACTTCAGAGACGGCCCACT
ACCTGCTCGACAGCGGCGTCCAGCTGCTGACGAGCGGTAATCATTTCTACTCCAAGAAGGCCATCCTCCCCTGGGTGAAG
GAGCATCCGGACCTGCTCTTGCGTCCGGCCAACTACCCCAAGGGCACGCCGGGCAAGGGCCACAGCGTGGTGAAGCTGCC
GGATGGGCGCGCGCTGGGCGTCATCAACCTGGAGGGGCGCGTCTTCATGCGCACCGAGGCCAGCCCCTTCGAGGTGGTGG
AAGGGCTGGTGGAGGAGCTGCGCCAGCAGACGCCCTGCATCCTGGTGGACATGCACTGCGAGGCGTCCAGTGAGAAGAAC
GCCATGGGCGTCCACCTGGATGGGCGGGTGTCCGTGGTGGTGGGGACGCACACACACGTGCAGACGGCGGATGAGCGCAT
CCTCCCCGGTGGCACGGCCTTCATCACCGATGTCGGCATGTGCGGGCCGCTGGACTCCGTCATCGGCATGAAGAAGGAGT
CCTCGCTGACGCGCTTCCTGGGCAAGCCGGCGCCGTATGAGGTGGCGGAGCGGCTCGTCTACCTGCAAGGCGTGGTGGTG
GACATCGACGACGCCACCGGACAGGGCCGGAGCATCCACCGCGTGCGTGAGCACCTGCCAGGCACCTGA

Upstream 100 bases:

>100_bases
CCGTGCTGCCCACGACCGGGGATGACGTCGACATGGACCTGGTCGTAACGGAGTCTGAGTCCCTGCGCGGCCTGTACCGC
GACTGGGACTTCCTCGATAC

Downstream 100 bases:

>100_bases
AACCCGGTGGAGGAAGTGCGTCCACGGCTGGCGCACTTCGGGTAGCTTGCGGCGCCATGAATCCGGACGCGCTGCGCAAG
GCGACCCCCGAGGAGCAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MKVLFMGDVVGRPGLQAVRTLLPRVRAQHGVDVVVANAENSDQGSGITSETAHYLLDSGVQLLTSGNHFYSKKAILPWVK
EHPDLLLRPANYPKGTPGKGHSVVKLPDGRALGVINLEGRVFMRTEASPFEVVEGLVEELRQQTPCILVDMHCEASSEKN
AMGVHLDGRVSVVVGTHTHVQTADERILPGGTAFITDVGMCGPLDSVIGMKKESSLTRFLGKPAPYEVAERLVYLQGVVV
DIDDATGQGRSIHRVREHLPGT

Sequences:

>Translated_262_residues
MKVLFMGDVVGRPGLQAVRTLLPRVRAQHGVDVVVANAENSDQGSGITSETAHYLLDSGVQLLTSGNHFYSKKAILPWVK
EHPDLLLRPANYPKGTPGKGHSVVKLPDGRALGVINLEGRVFMRTEASPFEVVEGLVEELRQQTPCILVDMHCEASSEKN
AMGVHLDGRVSVVVGTHTHVQTADERILPGGTAFITDVGMCGPLDSVIGMKKESSLTRFLGKPAPYEVAERLVYLQGVVV
DIDDATGQGRSIHRVREHLPGT
>Mature_262_residues
MKVLFMGDVVGRPGLQAVRTLLPRVRAQHGVDVVVANAENSDQGSGITSETAHYLLDSGVQLLTSGNHFYSKKAILPWVK
EHPDLLLRPANYPKGTPGKGHSVVKLPDGRALGVINLEGRVFMRTEASPFEVVEGLVEELRQQTPCILVDMHCEASSEKN
AMGVHLDGRVSVVVGTHTHVQTADERILPGGTAFITDVGMCGPLDSVIGMKKESSLTRFLGKPAPYEVAERLVYLQGVVV
DIDDATGQGRSIHRVREHLPGT

Specific function: Unknown

COG id: COG1692

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005235 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28310; Mature: 28310

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLFMGDVVGRPGLQAVRTLLPRVRAQHGVDVVVANAENSDQGSGITSETAHYLLDSGV
CEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCC
QLLTSGNHFYSKKAILPWVKEHPDLLLRPANYPKGTPGKGHSVVKLPDGRALGVINLEGR
EEEECCCCEECCCCCCCHHHCCCCEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCE
VFMRTEASPFEVVEGLVEELRQQTPCILVDMHCEASSEKNAMGVHLDGRVSVVVGTHTHV
EEEEECCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEECCEEEEEEECCCEE
QTADERILPGGTAFITDVGMCGPLDSVIGMKKESSLTRFLGKPAPYEVAERLVYLQGVVV
ECCCCEECCCCCEEEECCCCCCCHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCEEEE
DIDDATGQGRSIHRVREHLPGT
EECCCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MKVLFMGDVVGRPGLQAVRTLLPRVRAQHGVDVVVANAENSDQGSGITSETAHYLLDSGV
CEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCC
QLLTSGNHFYSKKAILPWVKEHPDLLLRPANYPKGTPGKGHSVVKLPDGRALGVINLEGR
EEEECCCCEECCCCCCCHHHCCCCEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCE
VFMRTEASPFEVVEGLVEELRQQTPCILVDMHCEASSEKNAMGVHLDGRVSVVVGTHTHV
EEEEECCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEECCEEEEEEECCCEE
QTADERILPGGTAFITDVGMCGPLDSVIGMKKESSLTRFLGKPAPYEVAERLVYLQGVVV
ECCCCEECCCCCEEEECCCCCCCHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCEEEE
DIDDATGQGRSIHRVREHLPGT
EECCCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]