| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108761535
Identifier: 108761535
GI number: 108761535
Start: 341568
End: 342905
Strand: Direct
Name: 108761535
Synonym: MXAN_0288
Alternate gene names: NA
Gene position: 341568-342905 (Clockwise)
Preceding gene: 108759506
Following gene: 108761980
Centisome position: 3.74
GC content: 72.8
Gene sequence:
>1338_bases GTGGCCCATGAGACGTCCGGCATCGGGGGCGGTCCGCTCCCGCAGATTGATTCGCGGCACAATGCCTCGTGCGACCACGG GGGAGTACGTATGAAGCAGACGGCCTGGGCAGTGGAGCGTGACGCCGAACATGGCCGCGAGGTGCTCCTCCTCGTCACCC TGGAAGCCGACGCCGACGCCCCCCGCGCGCCCGTGGCCATCAACCTCGCTTTGGATCGCAGCGCCTCCATGCGGGGCGTG CCGCTGCTCGCCGCGGTGCAGGCCGCCCAGGCGCTCGTGGAGCGCGCCAGCCCACGCGACTACCTGGGCCTGCTCACCTT CGACGCCGAGCCCGAGCAGGTCCTCCCCATGCGCGCCATGGACCCCAACGCCCGGGCGCAGCTCCTCAAGGTGCTCGCGC GCCTGGAGTCCGGCGAGGGGACCGCCCTGCACGAGGCCGTGGAGCGCGCCTCGGAGTCCGCCCGCCGCGTGCTCGTGCCC GGCGCCCGGCCCCAGGTGCTGATGCTTACTGATGGCGAGCCCTCGGTAGGCCCGTCGCAGCTCGCAGAGTTCAAGACCCA GGGCGCCCGCATCGCCGAGTCCGGCGTCATGCTCCACGCGCTGGGGCTGGGCCGCCACTACCTGCCCGACATCCTGGAGG CCCTCACCAGTCCCTCCGGCACGGGCTTCGTGCACGTGGATGACCCGGAAGGTTTGCCCATGGCCGTGGGCCAACTGGGC GCCGAGCTCTTCGGTGAAGTCGTCGCCGACGCGCGCGTGCACGTGCTGCCCACGGGCTTCGCCGACGTCCGCTGTCGTCA CCGCTATCCCTCGCGCGTGGAGGGCGACGCCATGAGCGCCACCCTGGGCGCCATCTCCCAGGCCTTCCCGCGCCGCGTCC TCTTCTCGGGCATGTTGGGGGATGCGGAGTGGAACCTGGGCGTGTCCACGTCCTACTCCGAGCGCGGCGATACGCGGCGC ATCAGCGTGCCAGTGACGCGTGTGCTGCCCGACAGTGACGCGGGCCGCTTCGTGCGCGCCGTGTCCGCCGAGCTGGACCT GGTCGCCGGTGAAGCCGCCGCGTGGAAGGCCCTGGGCCGCCGTCACCAGGACGCCGCTGAGCGGGCGCTGGAGGCCGCGG ACGTCGCCCTCTACAAACTCGCGCGGCTCGGCTCGGCGGAGGTGCCCGCGCAACGCCACGTGGAGCGGCTGGCGGACCTG CGCCGGGTGATAGAGCGCCGGGCAAACAAGCTCCCCGCGCTGGTGATGCGCCGCGCGCACTCCGAGGTCTCCCGCATCAC CATGAGCCGCGTGGGCCCCGCGGCGCCCGCGCTGCTGCCCTGGAAGACCGAGGACTGA
Upstream 100 bases:
>100_bases CCTTCAGGGTGAGCCCCCGGGCCCCCTTGCTCCAAAGCACGACTCCCGACATTCTCAGACCCCGCAGCCTGCCCGTGAGC GTCCCCCGCTCCCGTGCGTT
Downstream 100 bases:
>100_bases CGCCCGTCGCTCGGCTGCCCTTGTGGGTTCATGACGTTACCTCTGTGACGCTGTAACCCCTCCTGCTCGGACTGTCCGCC TGGGAGTGGGCGTGGCGCGT
Product: von Willebrand factor type A domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MAHETSGIGGGPLPQIDSRHNASCDHGGVRMKQTAWAVERDAEHGREVLLLVTLEADADAPRAPVAINLALDRSASMRGV PLLAAVQAAQALVERASPRDYLGLLTFDAEPEQVLPMRAMDPNARAQLLKVLARLESGEGTALHEAVERASESARRVLVP GARPQVLMLTDGEPSVGPSQLAEFKTQGARIAESGVMLHALGLGRHYLPDILEALTSPSGTGFVHVDDPEGLPMAVGQLG AELFGEVVADARVHVLPTGFADVRCRHRYPSRVEGDAMSATLGAISQAFPRRVLFSGMLGDAEWNLGVSTSYSERGDTRR ISVPVTRVLPDSDAGRFVRAVSAELDLVAGEAAAWKALGRRHQDAAERALEAADVALYKLARLGSAEVPAQRHVERLADL RRVIERRANKLPALVMRRAHSEVSRITMSRVGPAAPALLPWKTED
Sequences:
>Translated_445_residues MAHETSGIGGGPLPQIDSRHNASCDHGGVRMKQTAWAVERDAEHGREVLLLVTLEADADAPRAPVAINLALDRSASMRGV PLLAAVQAAQALVERASPRDYLGLLTFDAEPEQVLPMRAMDPNARAQLLKVLARLESGEGTALHEAVERASESARRVLVP GARPQVLMLTDGEPSVGPSQLAEFKTQGARIAESGVMLHALGLGRHYLPDILEALTSPSGTGFVHVDDPEGLPMAVGQLG AELFGEVVADARVHVLPTGFADVRCRHRYPSRVEGDAMSATLGAISQAFPRRVLFSGMLGDAEWNLGVSTSYSERGDTRR ISVPVTRVLPDSDAGRFVRAVSAELDLVAGEAAAWKALGRRHQDAAERALEAADVALYKLARLGSAEVPAQRHVERLADL RRVIERRANKLPALVMRRAHSEVSRITMSRVGPAAPALLPWKTED >Mature_444_residues AHETSGIGGGPLPQIDSRHNASCDHGGVRMKQTAWAVERDAEHGREVLLLVTLEADADAPRAPVAINLALDRSASMRGVP LLAAVQAAQALVERASPRDYLGLLTFDAEPEQVLPMRAMDPNARAQLLKVLARLESGEGTALHEAVERASESARRVLVPG ARPQVLMLTDGEPSVGPSQLAEFKTQGARIAESGVMLHALGLGRHYLPDILEALTSPSGTGFVHVDDPEGLPMAVGQLGA ELFGEVVADARVHVLPTGFADVRCRHRYPSRVEGDAMSATLGAISQAFPRRVLFSGMLGDAEWNLGVSTSYSERGDTRRI SVPVTRVLPDSDAGRFVRAVSAELDLVAGEAAAWKALGRRHQDAAERALEAADVALYKLARLGSAEVPAQRHVERLADLR RVIERRANKLPALVMRRAHSEVSRITMSRVGPAAPALLPWKTED
Specific function: Unknown
COG id: COG2304
COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47740; Mature: 47609
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHETSGIGGGPLPQIDSRHNASCDHGGVRMKQTAWAVERDAEHGREVLLLVTLEADADA CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCEEEEEEEEECCCCC PRAPVAINLALDRSASMRGVPLLAAVQAAQALVERASPRDYLGLLTFDAEPEQVLPMRAM CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHCCCCCCC DPNARAQLLKVLARLESGEGTALHEAVERASESARRVLVPGARPQVLMLTDGEPSVGPSQ CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEECCCCCCCEEEEECCCCCCCHHH LAEFKTQGARIAESGVMLHALGLGRHYLPDILEALTSPSGTGFVHVDDPEGLPMAVGQLG HHHHHHCCCEEHHCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHH AELFGEVVADARVHVLPTGFADVRCRHRYPSRVEGDAMSATLGAISQAFPRRVLFSGMLG HHHHHHHHHCCEEEEEECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC DAEWNLGVSTSYSERGDTRRISVPVTRVLPDSDAGRFVRAVSAELDLVAGEAAAWKALGR CCCCCCCCCCCCCCCCCCEEEECCCEEECCCCCHHHHHHHHHHHHHEEECCHHHHHHHHH RHQDAAERALEAADVALYKLARLGSAEVPAQRHVERLADLRRVIERRANKLPALVMRRAH HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH SEVSRITMSRVGPAAPALLPWKTED HHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure AHETSGIGGGPLPQIDSRHNASCDHGGVRMKQTAWAVERDAEHGREVLLLVTLEADADA CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCEEEEEEEEECCCCC PRAPVAINLALDRSASMRGVPLLAAVQAAQALVERASPRDYLGLLTFDAEPEQVLPMRAM CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHCCCCCCC DPNARAQLLKVLARLESGEGTALHEAVERASESARRVLVPGARPQVLMLTDGEPSVGPSQ CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEECCCCCCCEEEEECCCCCCCHHH LAEFKTQGARIAESGVMLHALGLGRHYLPDILEALTSPSGTGFVHVDDPEGLPMAVGQLG HHHHHHCCCEEHHCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHH AELFGEVVADARVHVLPTGFADVRCRHRYPSRVEGDAMSATLGAISQAFPRRVLFSGMLG HHHHHHHHHCCEEEEEECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC DAEWNLGVSTSYSERGDTRRISVPVTRVLPDSDAGRFVRAVSAELDLVAGEAAAWKALGR CCCCCCCCCCCCCCCCCCEEEECCCEEECCCCCHHHHHHHHHHHHHEEECCHHHHHHHHH RHQDAAERALEAADVALYKLARLGSAEVPAQRHVERLADLRRVIERRANKLPALVMRRAH HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH SEVSRITMSRVGPAAPALLPWKTED HHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA