| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108761506
Identifier: 108761506
GI number: 108761506
Start: 2094470
End: 2095849
Strand: Reverse
Name: 108761506
Synonym: MXAN_1769
Alternate gene names: NA
Gene position: 2095849-2094470 (Counterclockwise)
Preceding gene: 108756789
Following gene: 108759442
Centisome position: 22.93
GC content: 69.49
Gene sequence:
>1380_bases ATGCGGATTCTCTCGCTTGCGGTGATGGGGACCACCGCCTGCGCCGCGCCGTCCGCGCTCGCCGTGTCTCCGGCCGGGGT GCCCGCGTTCAGCGAAGACATGCTGTCGCCCGAGTTCTGGATTCGCCGCGCGCCGTCTCCCGACGAGGTGCTGCTCGATG CCGACCAGGTGGCGGCGAAGCGCATGCGCGCCTTCGGTCCGGATGGCGGCCTGGTCGACTTGAAGCGCATCCCAGCCACG CTGACGCGGGCGGAAGTCGCCAGCTGGGTCAAGGATGCGCAGCAGACGCCCATCCAGGCAGCCATCGACGAACAGGGCCG GCTGGTGACGGAGGCGATGCTCGAAGAGCTGCGCCAGAACACCGCGGCCGAGCACATCCCCGAAGCATCCACCGCGCGCT ACGGCCTCAGCGTGCGGCGCACGCCCCTGCGGTCCCTCCCGTCCGAGCGGCGATTCTTCGCGGCGGAGAACCTGCGCGAC TACGAGAGCCTTCAGGCCGGCATCCTGTTCCCGGGCGAGCCGGTCGTCATCGCGCACCACAGCGCGGACCAGCAATGGCT GTTCGTCCTGACGACCCAGGGGCCCGCATGGGTCCGGCGCGGAGATGTCGCGGAAGGCACGGCGGACACGGTGTTCTCCT ACGTGGCGAAGGCGCCCGGGCGTGTCGTCACGGGCGACCAGGTGCGCACGGTCTTCACGCCGGAAGCACCCGGGGTGTCC GAGCTCGAGCTCGACATGGGGGTCGCGCTGCCGCGGGCCGACGTGGCGCCCGGCGAGCCCGTCAATGGCGCCAGCAGCTA TGCGTCGTGGCCGGTGCTGCTGCCGGTGCGTGAGCAGGACGGCACGCTGGCCTTCCAGAGCGCGCTGCTGCGCCGTACCG CCGACACCGCGCCGGGCTATCTGCCGCTGACACGTGCCAACATCCTCCGCCAGGCGTTCAAGTTCCTCGGCGAGCGCTAC GGCTGGGGGCACCAGTTCAATGCGCGCGACTGCAGCGGCCTGACCAGCGAGGTGTACCGCAGCCTGGGGCTGTTCCTGCC GCCCAACTCCGGGATGCAAGGGAAGAGCGCGGCGCTGAACCACCGCCTCTTCACGGCCCAGGACTCACACACCGAGCGGC TGCGCGCGCTGGCCCGGGCGCAGGTGGGCGACCTCATCGTCGTTCCCGGTCATGTGTTGATGCTCATTGGCCACGTGAAT GGCGAGCCCTACGTCATCCAGGATGTGCCGTATGCCGTATTCAAGGATCCGGCCACGCAGCAGCTCCGGAAGACGAAGCT GAACCAGGTGTCGGTCACCCCGCTGCTGCCGCTGTACGCCGACGACACGACCCTATACGTGGACGCGATGACGAGCCTCG TGCACGTCACGCAGCCATAG
Upstream 100 bases:
>100_bases GCCGTCTTCCCCTCAGGGAGTTGAACACATGAGCCGCCTGGCATCCCCCTCCACTCAGCCATGTGCGACGACGTTCCGGG CTGGCGCACGCACATGGCGC
Downstream 100 bases:
>100_bases ACCCGACCGCCGAGCGCGTCGGGTCCCTCACCGCGGCCCGGGCGGACGCCTCCTCTCGCGGACATCATCACGCGCGGCGA CACCATCGCGGCACGCCGCT
Product: NlpC/P60 family protein
Products: NA
Alternate protein names: NlpC/P60 Family Protein; Cell Wall-Associated Hydrolases; Nlp/P60 Protein; Cell Wall-Associated Hydrolase Protein; Lipoprotein NLP/P60 Family; NLP/P60 Family Lipoprotein; Cell Wall-Associated Hydrolase; Lipoprotein
Number of amino acids: Translated: 459; Mature: 459
Protein sequence:
>459_residues MRILSLAVMGTTACAAPSALAVSPAGVPAFSEDMLSPEFWIRRAPSPDEVLLDADQVAAKRMRAFGPDGGLVDLKRIPAT LTRAEVASWVKDAQQTPIQAAIDEQGRLVTEAMLEELRQNTAAEHIPEASTARYGLSVRRTPLRSLPSERRFFAAENLRD YESLQAGILFPGEPVVIAHHSADQQWLFVLTTQGPAWVRRGDVAEGTADTVFSYVAKAPGRVVTGDQVRTVFTPEAPGVS ELELDMGVALPRADVAPGEPVNGASSYASWPVLLPVREQDGTLAFQSALLRRTADTAPGYLPLTRANILRQAFKFLGERY GWGHQFNARDCSGLTSEVYRSLGLFLPPNSGMQGKSAALNHRLFTAQDSHTERLRALARAQVGDLIVVPGHVLMLIGHVN GEPYVIQDVPYAVFKDPATQQLRKTKLNQVSVTPLLPLYADDTTLYVDAMTSLVHVTQP
Sequences:
>Translated_459_residues MRILSLAVMGTTACAAPSALAVSPAGVPAFSEDMLSPEFWIRRAPSPDEVLLDADQVAAKRMRAFGPDGGLVDLKRIPAT LTRAEVASWVKDAQQTPIQAAIDEQGRLVTEAMLEELRQNTAAEHIPEASTARYGLSVRRTPLRSLPSERRFFAAENLRD YESLQAGILFPGEPVVIAHHSADQQWLFVLTTQGPAWVRRGDVAEGTADTVFSYVAKAPGRVVTGDQVRTVFTPEAPGVS ELELDMGVALPRADVAPGEPVNGASSYASWPVLLPVREQDGTLAFQSALLRRTADTAPGYLPLTRANILRQAFKFLGERY GWGHQFNARDCSGLTSEVYRSLGLFLPPNSGMQGKSAALNHRLFTAQDSHTERLRALARAQVGDLIVVPGHVLMLIGHVN GEPYVIQDVPYAVFKDPATQQLRKTKLNQVSVTPLLPLYADDTTLYVDAMTSLVHVTQP >Mature_459_residues MRILSLAVMGTTACAAPSALAVSPAGVPAFSEDMLSPEFWIRRAPSPDEVLLDADQVAAKRMRAFGPDGGLVDLKRIPAT LTRAEVASWVKDAQQTPIQAAIDEQGRLVTEAMLEELRQNTAAEHIPEASTARYGLSVRRTPLRSLPSERRFFAAENLRD YESLQAGILFPGEPVVIAHHSADQQWLFVLTTQGPAWVRRGDVAEGTADTVFSYVAKAPGRVVTGDQVRTVFTPEAPGVS ELELDMGVALPRADVAPGEPVNGASSYASWPVLLPVREQDGTLAFQSALLRRTADTAPGYLPLTRANILRQAFKFLGERY GWGHQFNARDCSGLTSEVYRSLGLFLPPNSGMQGKSAALNHRLFTAQDSHTERLRALARAQVGDLIVVPGHVLMLIGHVN GEPYVIQDVPYAVFKDPATQQLRKTKLNQVSVTPLLPLYADDTTLYVDAMTSLVHVTQP
Specific function: Unknown
COG id: COG0791
COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49907; Mature: 49907
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILSLAVMGTTACAAPSALAVSPAGVPAFSEDMLSPEFWIRRAPSPDEVLLDADQVAAK CCEEEEEEECCHHHCCCCCEEECCCCCCCCHHHHCCHHHHEECCCCCCCEEECHHHHHHH RMRAFGPDGGLVDLKRIPATLTRAEVASWVKDAQQTPIQAAIDEQGRLVTEAMLEELRQN HHHHCCCCCCEEEHHHCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHH TAAEHIPEASTARYGLSVRRTPLRSLPSERRFFAAENLRDYESLQAGILFPGEPVVIAHH HHHHHCCCCCHHHHCCEEECCHHHHCCCHHHHHHHHCCHHHHHHHCCEECCCCCEEEEEC SADQQWLFVLTTQGPAWVRRGDVAEGTADTVFSYVAKAPGRVVTGDQVRTVFTPEAPGVS CCCCCEEEEEECCCCHHEECCCCCCCHHHHHHHHHHHCCCCEEECCCEEEEECCCCCCCC ELELDMGVALPRADVAPGEPVNGASSYASWPVLLPVREQDGTLAFQSALLRRTADTAPGY EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCE LPLTRANILRQAFKFLGERYGWGHQFNARDCSGLTSEVYRSLGLFLPPNSGMQGKSAALN EEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCEEECCCCCCCCCHHHHC HRLFTAQDSHTERLRALARAQVGDLIVVPGHVLMLIGHVNGEPYVIQDVPYAVFKDPATQ CEEEECCCCHHHHHHHHHHHHCCCEEEECCEEEEEEEECCCCCEEEECCCHHHHCCCHHH QLRKTKLNQVSVTPLLPLYADDTTLYVDAMTSLVHVTQP HHHHHHCCEEECCEEEEEEECCCEEEHHHHHHHHEECCC >Mature Secondary Structure MRILSLAVMGTTACAAPSALAVSPAGVPAFSEDMLSPEFWIRRAPSPDEVLLDADQVAAK CCEEEEEEECCHHHCCCCCEEECCCCCCCCHHHHCCHHHHEECCCCCCCEEECHHHHHHH RMRAFGPDGGLVDLKRIPATLTRAEVASWVKDAQQTPIQAAIDEQGRLVTEAMLEELRQN HHHHCCCCCCEEEHHHCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHH TAAEHIPEASTARYGLSVRRTPLRSLPSERRFFAAENLRDYESLQAGILFPGEPVVIAHH HHHHHCCCCCHHHHCCEEECCHHHHCCCHHHHHHHHCCHHHHHHHCCEECCCCCEEEEEC SADQQWLFVLTTQGPAWVRRGDVAEGTADTVFSYVAKAPGRVVTGDQVRTVFTPEAPGVS CCCCCEEEEEECCCCHHEECCCCCCCHHHHHHHHHHHCCCCEEECCCEEEEECCCCCCCC ELELDMGVALPRADVAPGEPVNGASSYASWPVLLPVREQDGTLAFQSALLRRTADTAPGY EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCE LPLTRANILRQAFKFLGERYGWGHQFNARDCSGLTSEVYRSLGLFLPPNSGMQGKSAALN EEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCEEECCCCCCCCCHHHHC HRLFTAQDSHTERLRALARAQVGDLIVVPGHVLMLIGHVNGEPYVIQDVPYAVFKDPATQ CEEEECCCCHHHHHHHHHHHHCCCEEEECCEEEEEEEECCCCCEEEECCCHHHHCCCHHH QLRKTKLNQVSVTPLLPLYADDTTLYVDAMTSLVHVTQP HHHHHHCCEEECCEEEEEEECCCEEEHHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA