| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is celE [H]
Identifier: 108761415
GI number: 108761415
Start: 2565934
End: 2567259
Strand: Reverse
Name: celE [H]
Synonym: MXAN_2225
Alternate gene names: 108761415
Gene position: 2567259-2565934 (Counterclockwise)
Preceding gene: 108760590
Following gene: 108758885
Centisome position: 28.09
GC content: 69.16
Gene sequence:
>1326_bases ATGGTGCCCGATGCCCGCGCTGACGTCCCCTGGACGCCGGGTGCCCTGCGTCCCCAGCGCATGCGTGTCCGTCTTGCGAT ATCCACTGAGCGCATGAGGAACGCCCTTCATGCGGTGCGTGGCATCGGCGCGGCCCTGGCGCGGGGACTGCTGGTCGCCA GCGTGGGAGCCGGACTGCTGGTGAGTGGGTGCAAGTCAGCCTCGCACACCCCGCCGCTCGCGCCAGACGCGGGTGCACTG GCGTGGGTGCGCATTCCCGCCTCCGACGCACGCGTGCAGTACCTCGGCCGGACGTACCGTTCGGACACCGGCGTCGTCTT CTCCCACCCCGGAGTGACCATCCGTGCCCGCTTCTGGGGAGACGCCGTTCGGATGGAGCTCCACGACGCGGGCCAGGGTG GCGAGGTGGGGACCACCTACTTCGATGTCGTGATTGACGGGGCGCCCGCGCGACAGCTCGCGGTGAGCCGCCATCAGTCC AGCTACCTGCTCGCCACCGGCCTGGAGGTGGGGCTGCACACGGTGGAACTCATCAAGCGCACCGAGTCCCTGGTCGGCCA CAGCGAACTCGTGGCGCTGGAGGTTCATGGCGAGCTCCGGGAGCCGCCCGCCCGCTCGGGACTCCGGATGGAGTTCGTTG GGGACTCCGTCACCTGTGGCTACGGAAGCGACGTCGCCCTCATCCCGGGCTCGCCCTCCTGGACCGCGCCCACCTTCACG TCGAAGAACCAGAATCCCCGGCGCACCTATGCCTGGCTCACGGCGGGGAACCTGGGCGCGGAGGCGGTGCTCATCTGCTA TTCGGGCCACGGGGTGTACCGCAACCTGGACATGTCCACGTCCGGCCTGGTGCCCGCGCTCTACGAGCTCGCGGTCCCCG GCCACGGCGTCGCCTGGGACTTCTCTGGCCCGTCGCCCGATGTGATTGTCGTCAACGCGGGGACCAACGACACGTTCGCC GGCAGCGGCACCGACGCCTACCTTCCGGACGAAGCGGCCTTCAAATCCGCCTACCGCGCGTTCCTCACGCGGCTGCGGAC GCTCCACCCGCGCGCCCATCTCGTCTGCACGTTGGGGAGCATGTCGGACGGCCGCAAGCAGCTCGAGCAGAACGGCACGA CGACTTCGGCCCATGTCGGTGACTGGCTCACCGAGCTTGTAGCAGAGCGACAGCAACAGGGAGACGCCCGCGTCTACCGG CACGTGATGGCCGTGCAGAATCCCAACGTGGACGGCGTTGGCGAGGACTGGCACCCGTCGGCGGCCACACACCAGAAGAT GGCGGAGGCGCTGACCTGGTTCATCCGGGATGTCGTGCGGCCCTGA
Upstream 100 bases:
>100_bases GAGCATCCCCGGCGGGACGTGGAGCCATCCCTCCTTCCCGCTCCACCGGCTGACCGGCCCGTAGCGCGCCACGTGGCACC GTGCCGAGCCTCGTGCCGGC
Downstream 100 bases:
>100_bases GCGGCTTCGTGCGCCACGAGCCGCCGCGCATGTGCGTCTCATAGCGCCGCCATACGCAGGAACAGGCACCTGGGCGCATG ACGCGAAGAGGTGCCCCCGG
Product: lipase domain-containing protein
Products: NA
Alternate protein names: Cellulase E; Endo-1,4-beta-glucanase E; EgE [H]
Number of amino acids: Translated: 441; Mature: 441
Protein sequence:
>441_residues MVPDARADVPWTPGALRPQRMRVRLAISTERMRNALHAVRGIGAALARGLLVASVGAGLLVSGCKSASHTPPLAPDAGAL AWVRIPASDARVQYLGRTYRSDTGVVFSHPGVTIRARFWGDAVRMELHDAGQGGEVGTTYFDVVIDGAPARQLAVSRHQS SYLLATGLEVGLHTVELIKRTESLVGHSELVALEVHGELREPPARSGLRMEFVGDSVTCGYGSDVALIPGSPSWTAPTFT SKNQNPRRTYAWLTAGNLGAEAVLICYSGHGVYRNLDMSTSGLVPALYELAVPGHGVAWDFSGPSPDVIVVNAGTNDTFA GSGTDAYLPDEAAFKSAYRAFLTRLRTLHPRAHLVCTLGSMSDGRKQLEQNGTTTSAHVGDWLTELVAERQQQGDARVYR HVMAVQNPNVDGVGEDWHPSAATHQKMAEALTWFIRDVVRP
Sequences:
>Translated_441_residues MVPDARADVPWTPGALRPQRMRVRLAISTERMRNALHAVRGIGAALARGLLVASVGAGLLVSGCKSASHTPPLAPDAGAL AWVRIPASDARVQYLGRTYRSDTGVVFSHPGVTIRARFWGDAVRMELHDAGQGGEVGTTYFDVVIDGAPARQLAVSRHQS SYLLATGLEVGLHTVELIKRTESLVGHSELVALEVHGELREPPARSGLRMEFVGDSVTCGYGSDVALIPGSPSWTAPTFT SKNQNPRRTYAWLTAGNLGAEAVLICYSGHGVYRNLDMSTSGLVPALYELAVPGHGVAWDFSGPSPDVIVVNAGTNDTFA GSGTDAYLPDEAAFKSAYRAFLTRLRTLHPRAHLVCTLGSMSDGRKQLEQNGTTTSAHVGDWLTELVAERQQQGDARVYR HVMAVQNPNVDGVGEDWHPSAATHQKMAEALTWFIRDVVRP >Mature_441_residues MVPDARADVPWTPGALRPQRMRVRLAISTERMRNALHAVRGIGAALARGLLVASVGAGLLVSGCKSASHTPPLAPDAGAL AWVRIPASDARVQYLGRTYRSDTGVVFSHPGVTIRARFWGDAVRMELHDAGQGGEVGTTYFDVVIDGAPARQLAVSRHQS SYLLATGLEVGLHTVELIKRTESLVGHSELVALEVHGELREPPARSGLRMEFVGDSVTCGYGSDVALIPGSPSWTAPTFT SKNQNPRRTYAWLTAGNLGAEAVLICYSGHGVYRNLDMSTSGLVPALYELAVPGHGVAWDFSGPSPDVIVVNAGTNDTFA GSGTDAYLPDEAAFKSAYRAFLTRLRTLHPRAHLVCTLGSMSDGRKQLEQNGTTTSAHVGDWLTELVAERQQQGDARVYR HVMAVQNPNVDGVGEDWHPSAATHQKMAEALTWFIRDVVRP
Specific function: This enzyme catalyzes the endohydrolysis of 1,4-beta- glucosidic linkages in cellulose, lichenin and cereal beta-D- glucans [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 5 (cellulase A) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016134 - InterPro: IPR002105 - InterPro: IPR018242 - InterPro: IPR013830 - InterPro: IPR013831 - InterPro: IPR001547 - InterPro: IPR018087 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR001087 [H]
Pfam domain/function: PF00150 Cellulase; PF00404 Dockerin_1; PF00657 Lipase_GDSL [H]
EC number: =3.2.1.4 [H]
Molecular weight: Translated: 47368; Mature: 47368
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPDARADVPWTPGALRPQRMRVRLAISTERMRNALHAVRGIGAALARGLLVASVGAGLL CCCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VSGCKSASHTPPLAPDAGALAWVRIPASDARVQYLGRTYRSDTGVVFSHPGVTIRARFWG HHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCEEEECCCEEEEEEECC DAVRMELHDAGQGGEVGTTYFDVVIDGAPARQLAVSRHQSSYLLATGLEVGLHTVELIKR CEEEEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCEEEEECHHHHHHHHHHHHH TESLVGHSELVALEVHGELREPPARSGLRMEFVGDSVTCGYGSDVALIPGSPSWTAPTFT HHHHCCCCEEEEEEECCCCCCCCCCCCCEEEECCCEEEECCCCCEEEECCCCCCCCCCCC SKNQNPRRTYAWLTAGNLGAEAVLICYSGHGVYRNLDMSTSGLVPALYELAVPGHGVAWD CCCCCCCEEEEEEEECCCCCEEEEEEEECCCEEEECCCCCCCCHHHHHHHCCCCCCEEEE FSGPSPDVIVVNAGTNDTFAGSGTDAYLPDEAAFKSAYRAFLTRLRTLHPRAHLVCTLGS CCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECC MSDGRKQLEQNGTTTSAHVGDWLTELVAERQQQGDARVYRHVMAVQNPNVDGVGEDWHPS CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCC AATHQKMAEALTWFIRDVVRP HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVPDARADVPWTPGALRPQRMRVRLAISTERMRNALHAVRGIGAALARGLLVASVGAGLL CCCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VSGCKSASHTPPLAPDAGALAWVRIPASDARVQYLGRTYRSDTGVVFSHPGVTIRARFWG HHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCEEEECCCEEEEEEECC DAVRMELHDAGQGGEVGTTYFDVVIDGAPARQLAVSRHQSSYLLATGLEVGLHTVELIKR CEEEEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCEEEEECHHHHHHHHHHHHH TESLVGHSELVALEVHGELREPPARSGLRMEFVGDSVTCGYGSDVALIPGSPSWTAPTFT HHHHCCCCEEEEEEECCCCCCCCCCCCCEEEECCCEEEECCCCCEEEECCCCCCCCCCCC SKNQNPRRTYAWLTAGNLGAEAVLICYSGHGVYRNLDMSTSGLVPALYELAVPGHGVAWD CCCCCCCEEEEEEEECCCCCEEEEEEEECCCEEEECCCCCCCCHHHHHHHCCCCCCEEEE FSGPSPDVIVVNAGTNDTFAGSGTDAYLPDEAAFKSAYRAFLTRLRTLHPRAHLVCTLGS CCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECC MSDGRKQLEQNGTTTSAHVGDWLTELVAERQQQGDARVYRHVMAVQNPNVDGVGEDWHPS CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCC AATHQKMAEALTWFIRDVVRP HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3066698 [H]