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The map label for this gene is betI [H]

Identifier: 108761328

GI number: 108761328

Start: 6668961

End: 6669569

Strand: Direct

Name: betI [H]

Synonym: MXAN_5356

Alternate gene names: 108761328

Gene position: 6668961-6669569 (Clockwise)

Preceding gene: 108762228

Following gene: 108762870

Centisome position: 72.97

GC content: 72.74

Gene sequence:

>609_bases
ATGCCCCGTCCATCCAACACCGAGGAGCGCCGTCAGCAGATTGTCGCGGGCCTGCTGAAGGTCATGTCGGAGCGCGGTTA
CGAGCGCGCTTCCGTGAGCGAAATCGCGAAGGCGGCGGGGTTGAGCGCGGGGCTGGTGCACTACCACTTCAGCGGCAAGC
AGGAGATTCTCCTCACGCTGGTGGAGCAGCTCGCGGCGCAGGCGCGGCAGCGGGTGGCGACGCGGCTGGAACGGGTGAAG
AGCCCGGACGCCCGAGCCCGCGTGGATGCCTTCGTGGAGGCCTTCCTCGCCACGGGCGACGACGCGGCCCCGGCGGCCGT
CGCGAGCTGGGTCACCATCAGCGCGGAGGCCATCCGGCAGCCCGAGGTGCGAGCCATCTACGAGCAGGTGGTGCGCGCCG
ACCTGGAGCACCTGACGTCGCTCGTCGCCGCCGTGGTGGGACGGCGCAAGGCGCCCGCGCTGGCGGCCGGGCTGTTCGCC
GCCGTGCAGGGCTACTTCGTGCTCGCCGCCAGCGTCCCGGGACTGGTCCCTGCGGGCTCCGCCGCCAGCACGGTGAAGCG
CATGGCCGCGGGGCTGCTGGACCCGGCCGGCGCGAAGGAGGACGCATGA

Upstream 100 bases:

>100_bases
GCTCCATCCACATTCGGGCCCTCGCCCCCAGGGGCAGGTGGGATTGACGCCCTTGCCTGCCCTGTTTATAAGTTGGTCAA
ACAACCAATAAACACGCCCC

Downstream 100 bases:

>100_bases
GGACGGCCACGAAGCTGGGGCTCCTCTCCAGCCTCTACCTGTCACAGGGGCTTCCCTTCGGTTTCTTCACCCAGGCCCTG
CCCGTGCTGCTGCGCCATCA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MPRPSNTEERRQQIVAGLLKVMSERGYERASVSEIAKAAGLSAGLVHYHFSGKQEILLTLVEQLAAQARQRVATRLERVK
SPDARARVDAFVEAFLATGDDAAPAAVASWVTISAEAIRQPEVRAIYEQVVRADLEHLTSLVAAVVGRRKAPALAAGLFA
AVQGYFVLAASVPGLVPAGSAASTVKRMAAGLLDPAGAKEDA

Sequences:

>Translated_202_residues
MPRPSNTEERRQQIVAGLLKVMSERGYERASVSEIAKAAGLSAGLVHYHFSGKQEILLTLVEQLAAQARQRVATRLERVK
SPDARARVDAFVEAFLATGDDAAPAAVASWVTISAEAIRQPEVRAIYEQVVRADLEHLTSLVAAVVGRRKAPALAAGLFA
AVQGYFVLAASVPGLVPAGSAASTVKRMAAGLLDPAGAKEDA
>Mature_201_residues
PRPSNTEERRQQIVAGLLKVMSERGYERASVSEIAKAAGLSAGLVHYHFSGKQEILLTLVEQLAAQARQRVATRLERVKS
PDARARVDAFVEAFLATGDDAAPAAVASWVTISAEAIRQPEVRAIYEQVVRADLEHLTSLVAAVVGRRKAPALAAGLFAA
VQGYFVLAASVPGLVPAGSAASTVKRMAAGLLDPAGAKEDA

Specific function: Repressor involved in choline regulation of the bet genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786505, Length=171, Percent_Identity=27.4853801169591, Blast_Score=64, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR017757
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 21282; Mature: 21150

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRPSNTEERRQQIVAGLLKVMSERGYERASVSEIAKAAGLSAGLVHYHFSGKQEILLTL
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHEECCCHHHHHHHH
VEQLAAQARQRVATRLERVKSPDARARVDAFVEAFLATGDDAAPAAVASWVTISAEAIRQ
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
PEVRAIYEQVVRADLEHLTSLVAAVVGRRKAPALAAGLFAAVQGYFVLAASVPGLVPAGS
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
AASTVKRMAAGLLDPAGAKEDA
HHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PRPSNTEERRQQIVAGLLKVMSERGYERASVSEIAKAAGLSAGLVHYHFSGKQEILLTL
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHEECCCHHHHHHHH
VEQLAAQARQRVATRLERVKSPDARARVDAFVEAFLATGDDAAPAAVASWVTISAEAIRQ
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
PEVRAIYEQVVRADLEHLTSLVAAVVGRRKAPALAAGLFAAVQGYFVLAASVPGLVPAGS
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
AASTVKRMAAGLLDPAGAKEDA
HHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9736747; 11481430 [H]