| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is ydjP [H]
Identifier: 108761275
GI number: 108761275
Start: 3829865
End: 3830662
Strand: Reverse
Name: ydjP [H]
Synonym: MXAN_3278
Alternate gene names: 108761275
Gene position: 3830662-3829865 (Counterclockwise)
Preceding gene: 108759806
Following gene: 108758957
Centisome position: 41.91
GC content: 69.55
Gene sequence:
>798_bases ATGCTGACCGTCACCGTGGATGGTGTCCCCCTGCACTACCGGGACGAGGGCAAGGGCCCACCCGTGCTGCTGCTGCATGC GTTTCCGCTGAATGGCAGCACCTTCGACAAACAGGTGAAGGCGCTGTCGGGGCGCTACCGCTTCATCATCCCGGACATCC GAGGCTTCGGAGAGAGCGCGCTGGGCGACGGCCCCACGGAGATGTTCCGCATCGCGCGTGACGCGCTGTCGCTGCTGGAC GCGCTGAATCTGGACACCGTGGTGGTGGGTGGAGTGTCCATGGGGGGCTACGCCGCCATGGCCCTGCTGCGCGAGGACGC GGGGCGCGTCAGCGGGCTGGTGTTGATGGATACGCAGGCCACCGCGGATGACGCGGAGGGCAAGGCGCGCCGGGAGACCT CCGCGATACAGGCGCTGGAGGTCGGCGTGGAGCCCATCATCCAGGCCATGCTCCCCAAGATGGTGGCCGCGGGACCGGAC TCACCGGTGGCGCAGGAAGTGGCGGCACTGATGCGCGCGGCCTCCCCCGCGAGCGTCGCGGCCGCGCTGCGCGGCATGGC CCTGCGCCCGGACAGCAAGGACATGCTGGCGCGGTACGCGGGCCCGGCACTGGTCATTGTGGGCGAGCACGACGCCCTCA CCCCGCCGGCCAAGGCGAAGGAAATCGCCGGACTCATCTCCGGAGCGAAGCTGGAGGTCATTCCGGATGCAGGGCACCTG GCCAACCAGGAACAGCCCGATCGGGTCAACGCCGTGCTGGATGCCTTCCTGACGTCGCTTCAGGGGCGCGGCGCCTGA
Upstream 100 bases:
>100_bases TGGTACCTGATGTGGGCGTCGATTCTCGGGCTGCCAGTGGGGATGGTCTTCTGGTTCAAGCACAAAGAGTGGTTCTGACA TTTCCGCGAGGAGAGGAAAC
Downstream 100 bases:
>100_bases GTGCAGGCTGGTGGCACGCCGTGGCCCATGCGAGCATGCGGGCTGGACAGTCCAGTCCGCTGCCGCTGAGGGTGCCGTGG ACCGCATGCATCTGAAGGAC
Product: alpha/beta fold family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MLTVTVDGVPLHYRDEGKGPPVLLLHAFPLNGSTFDKQVKALSGRYRFIIPDIRGFGESALGDGPTEMFRIARDALSLLD ALNLDTVVVGGVSMGGYAAMALLREDAGRVSGLVLMDTQATADDAEGKARRETSAIQALEVGVEPIIQAMLPKMVAAGPD SPVAQEVAALMRAASPASVAAALRGMALRPDSKDMLARYAGPALVIVGEHDALTPPAKAKEIAGLISGAKLEVIPDAGHL ANQEQPDRVNAVLDAFLTSLQGRGA
Sequences:
>Translated_265_residues MLTVTVDGVPLHYRDEGKGPPVLLLHAFPLNGSTFDKQVKALSGRYRFIIPDIRGFGESALGDGPTEMFRIARDALSLLD ALNLDTVVVGGVSMGGYAAMALLREDAGRVSGLVLMDTQATADDAEGKARRETSAIQALEVGVEPIIQAMLPKMVAAGPD SPVAQEVAALMRAASPASVAAALRGMALRPDSKDMLARYAGPALVIVGEHDALTPPAKAKEIAGLISGAKLEVIPDAGHL ANQEQPDRVNAVLDAFLTSLQGRGA >Mature_265_residues MLTVTVDGVPLHYRDEGKGPPVLLLHAFPLNGSTFDKQVKALSGRYRFIIPDIRGFGESALGDGPTEMFRIARDALSLLD ALNLDTVVVGGVSMGGYAAMALLREDAGRVSGLVLMDTQATADDAEGKARRETSAIQALEVGVEPIIQAMLPKMVAAGPD SPVAQEVAALMRAASPASVAAALRGMALRPDSKDMLARYAGPALVIVGEHDALTPPAKAKEIAGLISGAKLEVIPDAGHL ANQEQPDRVNAVLDAFLTSLQGRGA
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 27610; Mature: 27610
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTVTVDGVPLHYRDEGKGPPVLLLHAFPLNGSTFDKQVKALSGRYRFIIPDIRGFGESA CEEEEECCEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCCC LGDGPTEMFRIARDALSLLDALNLDTVVVGGVSMGGYAAMALLREDAGRVSGLVLMDTQA CCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCHHCCEEEEECCC TADDAEGKARRETSAIQALEVGVEPIIQAMLPKMVAAGPDSPVAQEVAALMRAASPASVA CCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHH AALRGMALRPDSKDMLARYAGPALVIVGEHDALTPPAKAKEIAGLISGAKLEVIPDAGHL HHHHCCCCCCCCHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCCC ANQEQPDRVNAVLDAFLTSLQGRGA CCCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLTVTVDGVPLHYRDEGKGPPVLLLHAFPLNGSTFDKQVKALSGRYRFIIPDIRGFGESA CEEEEECCEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCCC LGDGPTEMFRIARDALSLLDALNLDTVVVGGVSMGGYAAMALLREDAGRVSGLVLMDTQA CCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCHHCCEEEEECCC TADDAEGKARRETSAIQALEVGVEPIIQAMLPKMVAAGPDSPVAQEVAALMRAASPASVA CCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHH AALRGMALRPDSKDMLARYAGPALVIVGEHDALTPPAKAKEIAGLISGAKLEVIPDAGHL HHHHCCCCCCCCHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCCC ANQEQPDRVNAVLDAFLTSLQGRGA CCCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9455482; 9384377 [H]