| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108761187
Identifier: 108761187
GI number: 108761187
Start: 2092636
End: 2093193
Strand: Reverse
Name: 108761187
Synonym: MXAN_1766
Alternate gene names: NA
Gene position: 2093193-2092636 (Counterclockwise)
Preceding gene: 108760313
Following gene: 108761993
Centisome position: 22.9
GC content: 68.28
Gene sequence:
>558_bases ATGGGACTCTTGACCTTCAGCATCAACGTCACCTTGGACGGCTGCGTCGACCACCAGGAGGGAATCGCCGACAACGAGAC ACACGCCTTCTTCACCCGCCTCATGGACGAGGGCGGGGCGATGCTGTGGGGCCGCGTCACCTACGAGATGATGGAGAGCT ACTGGCCAGCGGTCGCCCGCGGCGACGAGGAGGCGCCGCCGGCGATGCGCGAGTGGGCGGTCAATCTGGAGGCCAAGCCG AAGTACGTGGTGTCGTCGACGCGAAAGGACTTCCCGTGGACCAATAGCCACCACATCGCCGGCGACCTGCGCACGGGCGT GCAGAAGCTCAAGGACGCGACCCCGGCCGGCGTGCTCCTCGGTAGCGGCAAGCTCGCGACCGAGCTGGACCGGCTGGATC TGATCGACGAGTACAAGTTCCTCGTCCACCCCAGGATCGCCGGCCACGGCCCGACCCTGTACCAGAGCGGGCTGCCCAGC ACGCGACGGCTCGAGCTGCTCTCGGCGAAGCCGCTCCGCAGCGGCGCGGTCGCCATGCACTACCGGCGCGCGCGCTGA
Upstream 100 bases:
>100_bases CGCGCTCGCGACACCTTCGCTCCTGGCGCACATCCTCAGCGACAAGTTCTGCGACGGCCTGCCGTTCCATCGCCAGGAGT GTATGGCTTAGACTCGCCGC
Downstream 100 bases:
>100_bases GACGCCCGGCCCCGCCCGCCGGGAGCAGGGAGCCGAATCCTCCTAGAGCGGGGCGGCCCCGTATACTCCCGGCCCACGTT TTCTGGCTCACCCAACGCAT
Product: riboflavin biosynthesis protein RibD domain-containing protein
Products: NA
Alternate protein names: Deaminase-Reductase Domain-Containing Protein; Bifunctional Deaminase-Reductase Domain-Containing Protein; Dihydrofolate Reductase; Bifunctional Deaminase-Reductase-Like Protein; Riboflavin Biosynthesis Protein RibD; Secreted Protein; Bifunctional Deaminase-Reductase-Like; Pyrimidine Reductase; Dihydrofolate Reductase Protein; Bifunctional Pyrimidine Deaminase/Reductase; Riboflavin Biosynthesis Protein RibD C- Domain Protein; RibD Domain-Containing Protein; Riboflavin Biosynthesis Reductase Protein; Reductase Protein
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MGLLTFSINVTLDGCVDHQEGIADNETHAFFTRLMDEGGAMLWGRVTYEMMESYWPAVARGDEEAPPAMREWAVNLEAKP KYVVSSTRKDFPWTNSHHIAGDLRTGVQKLKDATPAGVLLGSGKLATELDRLDLIDEYKFLVHPRIAGHGPTLYQSGLPS TRRLELLSAKPLRSGAVAMHYRRAR
Sequences:
>Translated_185_residues MGLLTFSINVTLDGCVDHQEGIADNETHAFFTRLMDEGGAMLWGRVTYEMMESYWPAVARGDEEAPPAMREWAVNLEAKP KYVVSSTRKDFPWTNSHHIAGDLRTGVQKLKDATPAGVLLGSGKLATELDRLDLIDEYKFLVHPRIAGHGPTLYQSGLPS TRRLELLSAKPLRSGAVAMHYRRAR >Mature_184_residues GLLTFSINVTLDGCVDHQEGIADNETHAFFTRLMDEGGAMLWGRVTYEMMESYWPAVARGDEEAPPAMREWAVNLEAKPK YVVSSTRKDFPWTNSHHIAGDLRTGVQKLKDATPAGVLLGSGKLATELDRLDLIDEYKFLVHPRIAGHGPTLYQSGLPST RRLELLSAKPLRSGAVAMHYRRAR
Specific function: Unknown
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20608; Mature: 20477
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLLTFSINVTLDGCVDHQEGIADNETHAFFTRLMDEGGAMLWGRVTYEMMESYWPAVAR CCEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCHHHC GDEEAPPAMREWAVNLEAKPKYVVSSTRKDFPWTNSHHIAGDLRTGVQKLKDATPAGVLL CCCCCCCHHHHHEECCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEE GSGKLATELDRLDLIDEYKFLVHPRIAGHGPTLYQSGLPSTRRLELLSAKPLRSGAVAMH ECCCHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHCCCCCCCEEEEECCCCCCCCCEEEE YRRAR EECCC >Mature Secondary Structure GLLTFSINVTLDGCVDHQEGIADNETHAFFTRLMDEGGAMLWGRVTYEMMESYWPAVAR CEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCHHHC GDEEAPPAMREWAVNLEAKPKYVVSSTRKDFPWTNSHHIAGDLRTGVQKLKDATPAGVLL CCCCCCCHHHHHEECCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEE GSGKLATELDRLDLIDEYKFLVHPRIAGHGPTLYQSGLPSTRRLELLSAKPLRSGAVAMH ECCCHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHCCCCCCCEEEEECCCCCCCCCEEEE YRRAR EECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA