| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108761183
Identifier: 108761183
GI number: 108761183
Start: 5061854
End: 5062444
Strand: Reverse
Name: 108761183
Synonym: MXAN_4116
Alternate gene names: NA
Gene position: 5062444-5061854 (Counterclockwise)
Preceding gene: 108761726
Following gene: 108761443
Centisome position: 55.39
GC content: 71.74
Gene sequence:
>591_bases GTGCCCCGCGAGCTTCCGCAAGACCACTTCTGCCCCTGGCGCGAGGAGGCCGAGGAACTCAAAGAGCGCCTGACGTCGCT GGAAGCAAAGATGGCGACGCTGGAGCGCCACGTCTTCAGCCGCAGGACGGAGAAGCTGCCGACGGTGGCCTCCGAGCTGC GAGGGGATGCGGACACCACGGCGGCCCAGGCCGAGGCCGCGAAGAAGAAGCGCCGAGAGAGAGCGGCCCGGAAGGCCGAG CAGGCCCCGGCGCGGGAGATTCGCCACGCGGTGCCCGCCGAGGAGCGCTGCTGCCCCGCATGCGGCGGCGAGGACTTGAG GCCGCTGGGCAAGGGCCGCGCCTCGGTGCTCTTCGAGCACATTCCCGCGCGCTTCGAGCGGCAGGTGCACGTGCAGGAAG TGCTGGCATGCACGTGCGGCAAGGGCGTCGTCACCGCGCCGCCTCCGCCCCGCGTGGTGGACAGGGGCGAGTACGGCCCT GGCTTCATCGCGCACGTGGCGCACGTCGAAGTGCGCGGACGCCATGCCGCTGCACCGGCTGGCCCAGCGGGTGGAGAGAA GCGGCGTGCCCATGAGTCGCAGCACGCGTAA
Upstream 100 bases:
>100_bases GCCCAGGTGAGGCGCCAGCCCGCCTGGACGCCTCCCGGGCGCACGGGCACCTGAGACGAGAGGCCCGGGACGCAGTGCGG CGGCGACGTGTTGTGGCGGA
Downstream 100 bases:
>100_bases CGGACCTCTTCCACCAGGCCGCCTCGGTGCTGCTGCCACTGTCCCAGCACCTCTTGCAGTGCATTGCCTCGGCGGACGTG GTGTGGGCGGACGAGACGCC
Product: IS66 family transposase Orf2
Products: NA
Alternate protein names: Transposase Is
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MPRELPQDHFCPWREEAEELKERLTSLEAKMATLERHVFSRRTEKLPTVASELRGDADTTAAQAEAAKKKRRERAARKAE QAPAREIRHAVPAEERCCPACGGEDLRPLGKGRASVLFEHIPARFERQVHVQEVLACTCGKGVVTAPPPPRVVDRGEYGP GFIAHVAHVEVRGRHAAAPAGPAGGEKRRAHESQHA
Sequences:
>Translated_196_residues MPRELPQDHFCPWREEAEELKERLTSLEAKMATLERHVFSRRTEKLPTVASELRGDADTTAAQAEAAKKKRRERAARKAE QAPAREIRHAVPAEERCCPACGGEDLRPLGKGRASVLFEHIPARFERQVHVQEVLACTCGKGVVTAPPPPRVVDRGEYGP GFIAHVAHVEVRGRHAAAPAGPAGGEKRRAHESQHA >Mature_195_residues PRELPQDHFCPWREEAEELKERLTSLEAKMATLERHVFSRRTEKLPTVASELRGDADTTAAQAEAAKKKRRERAARKAEQ APAREIRHAVPAEERCCPACGGEDLRPLGKGRASVLFEHIPARFERQVHVQEVLACTCGKGVVTAPPPPRVVDRGEYGPG FIAHVAHVEVRGRHAAAPAGPAGGEKRRAHESQHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21602; Mature: 21471
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRELPQDHFCPWREEAEELKERLTSLEAKMATLERHVFSRRTEKLPTVASELRGDADTT CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH AAQAEAAKKKRRERAARKAEQAPAREIRHAVPAEERCCPACGGEDLRPLGKGRASVLFEH HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHCCCCCCCCCCCHHHCHHHHHHHHH IPARFERQVHVQEVLACTCGKGVVTAPPPPRVVDRGEYGPGFIAHVAHVEVRGRHAAAPA HHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC GPAGGEKRRAHESQHA CCCCCHHHHHHHCCCC >Mature Secondary Structure PRELPQDHFCPWREEAEELKERLTSLEAKMATLERHVFSRRTEKLPTVASELRGDADTT CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH AAQAEAAKKKRRERAARKAEQAPAREIRHAVPAEERCCPACGGEDLRPLGKGRASVLFEH HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHCCCCCCCCCCCHHHCHHHHHHHHH IPARFERQVHVQEVLACTCGKGVVTAPPPPRVVDRGEYGPGFIAHVAHVEVRGRHAAAPA HHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC GPAGGEKRRAHESQHA CCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA