| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108761139
Identifier: 108761139
GI number: 108761139
Start: 6193174
End: 6194820
Strand: Direct
Name: 108761139
Synonym: MXAN_4951
Alternate gene names: NA
Gene position: 6193174-6194820 (Clockwise)
Preceding gene: 108760426
Following gene: 108760483
Centisome position: 67.76
GC content: 70.25
Gene sequence:
>1647_bases GTGAGGCGACTCCTTCCCATCCTGCTGGCCTGCCTGGCCGCGTGCGCGACGCCCTCCTCCTCTTCTGGGGAGAAGGGCGG ACTGGTCCCGCTGAAGCTCGATGAAGCGTCGCTGTCCAGCGCCTACAAGCCGCGCCGGATGGCCCTGCTGGTGGGCATCG CCTCGTTCGACGACCCGCGCTGGAAGGGGCTGCGCTACACCGTCAAGGACGCCCATGATCTGGGCGCCGCGCTGAAGGAC CCCGCGCGCGGCGGGTTCGACCAGGTGCGCATGCTCACCCGCCGCGAGGAGACGACGCGCGAGGCCATCCTCGCGGCGCT CCGGCAGCTCAAGAAGGAGGCGAGCCGGCCCGACGACGTGGTGGTCGTCTACTTCTCCGCGCACGGCACGCTGGCGCGCG ATGCGAAGGGCGAGCTGCGGCGCTACCTGGTCACCCGCGACGCGGCCTACCGGGACATTCCCCAGACGGCGCTGAGCATG GACACGCTGAAGGCGGAGTTCGACGGGCTGGCCAGCCGGCGCCGCATGCTGGTGCTGGCCACCTGCCACAGCGGCAGCGG CAAGTCGTTGCTGCCCAAGGAATTGAAGGCGGAGCTGGAGGGCATCAAGTCCGGCTTCTACGCCCGGCCGCTGGAGGAGT CGTCGCGCGCGTCCATGGTGTTCGCCGCCTGCGACTGGGGCGAGACGGCGCGCGAGGACGAGAGCCTGCGCAACGACATC TACACCCACTTCCTCATCGACGGCTTGAGCGGCGCGGCGGACCGCAATGGTGACGGCGCCGTCACGGCCACCGAGGCCCA TGACCACGCACGCCGCCGCACCTTCGCCTTCACCGAGGGGCGGCAGCGGCCGTCGGCGGAAATCATGGAAGTGGGCGCGG ACCCCGTGGTGCTCTCCGGCAGCATCACCCGGACGGGCCGCCCCGAGCTGTTCTCCTACAACCCGCGCCTGGACGGCTTC ACGCTCAAGGTGGACGGCGAGGAGCGCACGGACCTGCCCGGCGGCGCGACGGTGACGCCCGGCAAGCGGACGGTGGAGCT GACCAAGGGCGACGCCGTCCTCATGCGCCGTGACGTGGAGGTGGGCCAGGGGGACCGTCTGCCCCTGGAGCGCCTGCTGG CGGAGGCCTTCCCGCGGCGCTCACTGTCGCTGCTGGGCGGCATGTTCAGCTTCGCGGATGCCCGCAGCCGCACGGAGCTG CTGCCCATGTCCCCCGAAGTCGCCCTGTCATTGCGGCTGGAGGACCAGCCGATTCAGGATTTCGGACTGCTCTTCGACGT GGCCTTCAGCACCGGAGACCGGGCCCTGAAGCTGACGCCGGACAGCGAGGTGCCCTTCCGCTACACCACCGTCTCCGCGG GCGTGGCCCTTCCCTACCTGTGGCGCTGGGAGCGGCTGACGTTGTTCGCGGGGCCGCGTGTGGCCGGTCTGCACCTCAGG CGGTCCTTTGACGTAGAGGCCGCCGTCAACGGGCAACGGTTCTTCACCGTCAGCCCCGGCGTGGTGGGCGGCATCGTGTG GCGGGTGGGTGAGCGGCTGGAGCTGATGACACAGGCCCAGTTCATGCTGACGTATGTCGTTGTGGATGGGCAGGGGCAGG CCGTGGGTTTCACGGGTGGCTGGGCCGGCGCGGGATATCGTTTCTGA
Upstream 100 bases:
>100_bases GGACGAAACGGGGCAGGCCCCCAGGGTCAGGACCCACTGGCCATCATCCGGTTCGACGTGAGCGTGCGAAGCAGCCAGAA TCGTCCTTGAACGGTTCCAC
Downstream 100 bases:
>100_bases TGCGCTCGACGTTTCACATCGCGCTAGCCACCCTCGTGGCCTGCTGCGCCGCGGGCTGCGGCAACCTGGAGAACGACCCC TTCCGGGTGGGCACCGTGCA
Product: ICE-like protease
Products: NA
Alternate protein names: Actd-Like Protein; GUN4 Domain-Containing Protein; OmpA/MotB Family Protein; ICE-Like Protease
Number of amino acids: Translated: 548; Mature: 548
Protein sequence:
>548_residues MRRLLPILLACLAACATPSSSSGEKGGLVPLKLDEASLSSAYKPRRMALLVGIASFDDPRWKGLRYTVKDAHDLGAALKD PARGGFDQVRMLTRREETTREAILAALRQLKKEASRPDDVVVVYFSAHGTLARDAKGELRRYLVTRDAAYRDIPQTALSM DTLKAEFDGLASRRRMLVLATCHSGSGKSLLPKELKAELEGIKSGFYARPLEESSRASMVFAACDWGETAREDESLRNDI YTHFLIDGLSGAADRNGDGAVTATEAHDHARRRTFAFTEGRQRPSAEIMEVGADPVVLSGSITRTGRPELFSYNPRLDGF TLKVDGEERTDLPGGATVTPGKRTVELTKGDAVLMRRDVEVGQGDRLPLERLLAEAFPRRSLSLLGGMFSFADARSRTEL LPMSPEVALSLRLEDQPIQDFGLLFDVAFSTGDRALKLTPDSEVPFRYTTVSAGVALPYLWRWERLTLFAGPRVAGLHLR RSFDVEAAVNGQRFFTVSPGVVGGIVWRVGERLELMTQAQFMLTYVVVDGQGQAVGFTGGWAGAGYRF
Sequences:
>Translated_548_residues MRRLLPILLACLAACATPSSSSGEKGGLVPLKLDEASLSSAYKPRRMALLVGIASFDDPRWKGLRYTVKDAHDLGAALKD PARGGFDQVRMLTRREETTREAILAALRQLKKEASRPDDVVVVYFSAHGTLARDAKGELRRYLVTRDAAYRDIPQTALSM DTLKAEFDGLASRRRMLVLATCHSGSGKSLLPKELKAELEGIKSGFYARPLEESSRASMVFAACDWGETAREDESLRNDI YTHFLIDGLSGAADRNGDGAVTATEAHDHARRRTFAFTEGRQRPSAEIMEVGADPVVLSGSITRTGRPELFSYNPRLDGF TLKVDGEERTDLPGGATVTPGKRTVELTKGDAVLMRRDVEVGQGDRLPLERLLAEAFPRRSLSLLGGMFSFADARSRTEL LPMSPEVALSLRLEDQPIQDFGLLFDVAFSTGDRALKLTPDSEVPFRYTTVSAGVALPYLWRWERLTLFAGPRVAGLHLR RSFDVEAAVNGQRFFTVSPGVVGGIVWRVGERLELMTQAQFMLTYVVVDGQGQAVGFTGGWAGAGYRF >Mature_548_residues MRRLLPILLACLAACATPSSSSGEKGGLVPLKLDEASLSSAYKPRRMALLVGIASFDDPRWKGLRYTVKDAHDLGAALKD PARGGFDQVRMLTRREETTREAILAALRQLKKEASRPDDVVVVYFSAHGTLARDAKGELRRYLVTRDAAYRDIPQTALSM DTLKAEFDGLASRRRMLVLATCHSGSGKSLLPKELKAELEGIKSGFYARPLEESSRASMVFAACDWGETAREDESLRNDI YTHFLIDGLSGAADRNGDGAVTATEAHDHARRRTFAFTEGRQRPSAEIMEVGADPVVLSGSITRTGRPELFSYNPRLDGF TLKVDGEERTDLPGGATVTPGKRTVELTKGDAVLMRRDVEVGQGDRLPLERLLAEAFPRRSLSLLGGMFSFADARSRTEL LPMSPEVALSLRLEDQPIQDFGLLFDVAFSTGDRALKLTPDSEVPFRYTTVSAGVALPYLWRWERLTLFAGPRVAGLHLR RSFDVEAAVNGQRFFTVSPGVVGGIVWRVGERLELMTQAQFMLTYVVVDGQGQAVGFTGGWAGAGYRF
Specific function: Unknown
COG id: COG4249
COG function: function code R; Uncharacterized protein containing caspase domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60111; Mature: 60111
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLLPILLACLAACATPSSSSGEKGGLVPLKLDEASLSSAYKPRRMALLVGIASFDDPR CCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHCCCCCEEEEEEEEECCCCCC WKGLRYTVKDAHDLGAALKDPARGGFDQVRMLTRREETTREAILAALRQLKKEASRPDDV CCCCEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE VVVYFSAHGTLARDAKGELRRYLVTRDAAYRDIPQTALSMDTLKAEFDGLASRRRMLVLA EEEEEECCCCCCCCHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEE TCHSGSGKSLLPKELKAELEGIKSGFYARPLEESSRASMVFAACDWGETAREDESLRNDI EECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHH YTHFLIDGLSGAADRNGDGAVTATEAHDHARRRTFAFTEGRQRPSAEIMEVGADPVVLSG HHHHHHCCCCCCCCCCCCCCEEEECHHHHHHHHEEEECCCCCCCCHHHHHCCCCCEEEEC SITRTGRPELFSYNPRLDGFTLKVDGEERTDLPGGATVTPGKRTVELTKGDAVLMRRDVE CCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCCCEECCCCEEEEEECCCEEEEEECCC VGQGDRLPLERLLAEAFPRRSLSLLGGMFSFADARSRTELLPMSPEVALSLRLEDQPIQD CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEECCCCCCEEEEEEECCCCCHH FGLLFDVAFSTGDRALKLTPDSEVPFRYTTVSAGVALPYLWRWERLTLFAGPRVAGLHLR HHHEEEEEECCCCCEEEECCCCCCCEEEEEEECCCCCCCEEEEEEEEEEECCCEEEEEEE RSFDVEAAVNGQRFFTVSPGVVGGIVWRVGERLELMTQAQFMLTYVVVDGQGQAVGFTGG ECCCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCEEEECCC WAGAGYRF CCCCCCCC >Mature Secondary Structure MRRLLPILLACLAACATPSSSSGEKGGLVPLKLDEASLSSAYKPRRMALLVGIASFDDPR CCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHCCCCCEEEEEEEEECCCCCC WKGLRYTVKDAHDLGAALKDPARGGFDQVRMLTRREETTREAILAALRQLKKEASRPDDV CCCCEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE VVVYFSAHGTLARDAKGELRRYLVTRDAAYRDIPQTALSMDTLKAEFDGLASRRRMLVLA EEEEEECCCCCCCCHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEE TCHSGSGKSLLPKELKAELEGIKSGFYARPLEESSRASMVFAACDWGETAREDESLRNDI EECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHH YTHFLIDGLSGAADRNGDGAVTATEAHDHARRRTFAFTEGRQRPSAEIMEVGADPVVLSG HHHHHHCCCCCCCCCCCCCCEEEECHHHHHHHHEEEECCCCCCCCHHHHHCCCCCEEEEC SITRTGRPELFSYNPRLDGFTLKVDGEERTDLPGGATVTPGKRTVELTKGDAVLMRRDVE CCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCCCEECCCCEEEEEECCCEEEEEECCC VGQGDRLPLERLLAEAFPRRSLSLLGGMFSFADARSRTELLPMSPEVALSLRLEDQPIQD CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEECCCCCCEEEEEEECCCCCHH FGLLFDVAFSTGDRALKLTPDSEVPFRYTTVSAGVALPYLWRWERLTLFAGPRVAGLHLR HHHEEEEEECCCCCEEEECCCCCCCEEEEEEECCCCCCCEEEEEEEEEEECCCEEEEEEE RSFDVEAAVNGQRFFTVSPGVVGGIVWRVGERLELMTQAQFMLTYVVVDGQGQAVGFTGG ECCCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCEEEECCC WAGAGYRF CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA