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The map label for this gene is rimP

Identifier: 108761060

GI number: 108761060

Start: 2396029

End: 2396514

Strand: Direct

Name: rimP

Synonym: MXAN_2065

Alternate gene names: 108761060

Gene position: 2396029-2396514 (Clockwise)

Preceding gene: 108759065

Following gene: 108759193

Centisome position: 26.22

GC content: 65.23

Gene sequence:

>486_bases
ATGTCGGAGAAGAACCTCAAGCAGACGGTGGAGGAGCGGGCCTTGGCCCTGCTCGAGCCCATTGTCGCGGGTGAAGGCCT
GGAGCTCGTGGACCTGGAATTCCTCCGGGAGCGCGAGGGCTGGGTGCTCCGGTTGTTCATCGACAAGCCGGGTGGCCGCG
TAGGGCTGGACGAGTGCACCCAGGTGTCGCGCGCGGTGGATCCGTCGCTCGACGTGGAGGACTTCATCCCCCACGAGTAC
AACCTGGAGGTTTCCAGCCCCGGGGTGGACCGTCCGCTGAGGAAGCCGACGCACTTCGAGCGGGTGAAGGGACAGCAGGT
GAAGGTGAAGACGTTCGGCCCGGTGGGAGAGCCCCCGCGCAAGAACTTCACCGGCACGCTGACCGAGGTGGCAGGCGACG
GCATCTCGGTGGAGGTGGAAGGGGCCGGAACCTTCCACATCCTCTTCAAGGACATCGCCAAGGCGAACCTGGAGTTCCAG
TTCTAG

Upstream 100 bases:

>100_bases
GGGGCGTGTGCTACGGACGCCCCGACATTTTTCGATGAAGCACTTCGAAAAGTGGGCCGCGTGCCCGCTTTTCGTGTTTT
TGGAGACTGGTTTCCCGCTT

Downstream 100 bases:

>100_bases
ACGTCGACATACAGGGTGCCCCTCCGCGCGAGGGCGCCCGTGGACCCTTTTAGGAGAAGACCATGCCCACGCAGCAAGCC
AACCCGAGTGTCAACCTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MSEKNLKQTVEERALALLEPIVAGEGLELVDLEFLREREGWVLRLFIDKPGGRVGLDECTQVSRAVDPSLDVEDFIPHEY
NLEVSSPGVDRPLRKPTHFERVKGQQVKVKTFGPVGEPPRKNFTGTLTEVAGDGISVEVEGAGTFHILFKDIAKANLEFQ
F

Sequences:

>Translated_161_residues
MSEKNLKQTVEERALALLEPIVAGEGLELVDLEFLREREGWVLRLFIDKPGGRVGLDECTQVSRAVDPSLDVEDFIPHEY
NLEVSSPGVDRPLRKPTHFERVKGQQVKVKTFGPVGEPPRKNFTGTLTEVAGDGISVEVEGAGTFHILFKDIAKANLEFQ
F
>Mature_160_residues
SEKNLKQTVEERALALLEPIVAGEGLELVDLEFLREREGWVLRLFIDKPGGRVGLDECTQVSRAVDPSLDVEDFIPHEYN
LEVSSPGVDRPLRKPTHFERVKGQQVKVKTFGPVGEPPRKNFTGTLTEVAGDGISVEVEGAGTFHILFKDIAKANLEFQF

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=150, Percent_Identity=40, Blast_Score=94, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_MYXXD (Q1DAM9)

Other databases:

- EMBL:   CP000113
- RefSeq:   YP_630294.1
- ProteinModelPortal:   Q1DAM9
- SMR:   Q1DAM9
- STRING:   Q1DAM9
- GeneID:   4103648
- GenomeReviews:   CP000113_GR
- KEGG:   mxa:MXAN_2065
- TIGR:   MXAN_2065
- eggNOG:   COG0779
- HOGENOM:   HBG668072
- OMA:   ELVEVEW
- PhylomeDB:   Q1DAM9
- ProtClustDB:   CLSK945443
- BioCyc:   MXAN246197:MXAN_2065-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 17930; Mature: 17798

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKNLKQTVEERALALLEPIVAGEGLELVDLEFLREREGWVLRLFIDKPGGRVGLDECT
CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHCCCCEEEEEEEECCCCEECHHHHH
QVSRAVDPSLDVEDFIPHEYNLEVSSPGVDRPLRKPTHFERVKGQQVKVKTFGPVGEPPR
HHHHHCCCCCCHHHCCCCCEEEEECCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCC
KNFTGTLTEVAGDGISVEVEGAGTFHILFKDIAKANLEFQF
CCCCEEHHHHCCCCEEEEEECCCEEEHHHHHHHHCCCEECC
>Mature Secondary Structure 
SEKNLKQTVEERALALLEPIVAGEGLELVDLEFLREREGWVLRLFIDKPGGRVGLDECT
CCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHCCCCEEEEEEEECCCCEECHHHHH
QVSRAVDPSLDVEDFIPHEYNLEVSSPGVDRPLRKPTHFERVKGQQVKVKTFGPVGEPPR
HHHHHCCCCCCHHHCCCCCEEEEECCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCC
KNFTGTLTEVAGDGISVEVEGAGTFHILFKDIAKANLEFQF
CCCCEEHHHHCCCCEEEEEECCCEEEHHHHHHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA