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The map label for this gene is ybbK [C]

Identifier: 108760940

GI number: 108760940

Start: 889051

End: 889890

Strand: Reverse

Name: ybbK [C]

Synonym: MXAN_0779

Alternate gene names: 108760940

Gene position: 889890-889051 (Counterclockwise)

Preceding gene: 108758257

Following gene: 108759906

Centisome position: 9.74

GC content: 65.95

Gene sequence:

>840_bases
ATGCAACTGACTGGACTGTTCGGAGTGTTCATCCCCGTCGCCATCCTGTTCCTGCTCTTCCTGTCGGGGGTGCGAATCGT
CAACGAGTACCAGAACGGCGTGGTGTTCCGGCTCGGGCGCTTCGTGGGCCTCAAACGCGCGGGCTTCCGCTGGCTCATCC
CCTTCGTCGAGCGCATGGTCATCATCGACCTGCGCATCGTGGCCCGGGACGTGCCTCCACAGGACGTCATCACCCGGGAC
AACGTCAGCGTGAAGGTCAACGCCGTCGTCTACTTCCGCGTCATCCACGCCGACAAGGCCGTGCTCCAGGTGGAGGACTA
CCTCTATGCCACCAGCCAGCTCGCCCAGACGACGCTGCGCTCCATCCTGGGCCAGGTGGAGCTGGACCAGCTCCTCTCCG
AGCGGGAGCGCATCAACCACGAGATTCAGCAGGTGCTCGATGCACGCACCGACCCGTGGGGCGTCAAGGTGTCCAACGTG
GAGGTGAAGCACATCGACCTGCCCGCGGAGATGCAGCGGGCCATCGCGCGGCAGGCCGAGGCTGAGCGCGAGCGCCGCGC
GAAAATCATCGCCGCCGAGGGCGAACACCAGGCCGCCGAGAAGCTCTCCATGGCCGCCAAGGTCCTCGGCCGCTACCCGG
CCACCCTCCAGCTCCGCTACCTCCAGACGCTGGTGGAAATCACCACCGGTGGCAATCACACCATCCTGCCCATCCCGCTA
GACCTGCTGCGCACGCTCAGCGGCGTGAAAGCCCACATGGAGCGGGCCGACGATGGACATGAAGACCGGCGATACACCGA
GGATGAGGAAGAGGGCCCTCCCGCGGGCGGCCTGTCCTGA

Upstream 100 bases:

>100_bases
GCTGGCGCGCCACGTCCACCGCTCCCATCCGCTCCGGCGCACACGTCGTGGTGCGGGGCATGGAAGGACTCACCCTCTTC
GTCGACGAGGTACCGACCTG

Downstream 100 bases:

>100_bases
CAGCCGCTAGTCGAAGAGCTCCTGCCGCTCCAGCTTGATGGCCCGCCGGCTCAGCCGCAGCGACGCCAGGACGAGCAGCG
CCGTCGCGCCCACCGAGAAG

Product: SPFH domain-containing protein/band 7 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MQLTGLFGVFIPVAILFLLFLSGVRIVNEYQNGVVFRLGRFVGLKRAGFRWLIPFVERMVIIDLRIVARDVPPQDVITRD
NVSVKVNAVVYFRVIHADKAVLQVEDYLYATSQLAQTTLRSILGQVELDQLLSERERINHEIQQVLDARTDPWGVKVSNV
EVKHIDLPAEMQRAIARQAEAERERRAKIIAAEGEHQAAEKLSMAAKVLGRYPATLQLRYLQTLVEITTGGNHTILPIPL
DLLRTLSGVKAHMERADDGHEDRRYTEDEEEGPPAGGLS

Sequences:

>Translated_279_residues
MQLTGLFGVFIPVAILFLLFLSGVRIVNEYQNGVVFRLGRFVGLKRAGFRWLIPFVERMVIIDLRIVARDVPPQDVITRD
NVSVKVNAVVYFRVIHADKAVLQVEDYLYATSQLAQTTLRSILGQVELDQLLSERERINHEIQQVLDARTDPWGVKVSNV
EVKHIDLPAEMQRAIARQAEAERERRAKIIAAEGEHQAAEKLSMAAKVLGRYPATLQLRYLQTLVEITTGGNHTILPIPL
DLLRTLSGVKAHMERADDGHEDRRYTEDEEEGPPAGGLS
>Mature_279_residues
MQLTGLFGVFIPVAILFLLFLSGVRIVNEYQNGVVFRLGRFVGLKRAGFRWLIPFVERMVIIDLRIVARDVPPQDVITRD
NVSVKVNAVVYFRVIHADKAVLQVEDYLYATSQLAQTTLRSILGQVELDQLLSERERINHEIQQVLDARTDPWGVKVSNV
EVKHIDLPAEMQRAIARQAEAERERRAKIIAAEGEHQAAEKLSMAAKVLGRYPATLQLRYLQTLVEITTGGNHTILPIPL
DLLRTLSGVKAHMERADDGHEDRRYTEDEEEGPPAGGLS

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI38016911, Length=249, Percent_Identity=44.578313253012, Blast_Score=195, Evalue=4e-50,
Organism=Homo sapiens, GI21686995, Length=245, Percent_Identity=44.0816326530612, Blast_Score=189, Evalue=3e-48,
Organism=Homo sapiens, GI221316744, Length=245, Percent_Identity=44.0816326530612, Blast_Score=189, Evalue=3e-48,
Organism=Homo sapiens, GI7657615, Length=243, Percent_Identity=34.5679012345679, Blast_Score=141, Evalue=7e-34,
Organism=Homo sapiens, GI7305503, Length=177, Percent_Identity=36.7231638418079, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI20149563, Length=154, Percent_Identity=30.5194805194805, Blast_Score=73, Evalue=2e-13,
Organism=Escherichia coli, GI1786697, Length=219, Percent_Identity=36.0730593607306, Blast_Score=137, Evalue=6e-34,
Organism=Escherichia coli, GI1790616, Length=282, Percent_Identity=23.758865248227, Blast_Score=61, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI25153583, Length=249, Percent_Identity=45.7831325301205, Blast_Score=202, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI71987612, Length=249, Percent_Identity=45.7831325301205, Blast_Score=202, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI71987621, Length=235, Percent_Identity=48.5106382978723, Blast_Score=200, Evalue=6e-52,
Organism=Caenorhabditis elegans, GI193209764, Length=269, Percent_Identity=40.8921933085502, Blast_Score=197, Evalue=7e-51,
Organism=Caenorhabditis elegans, GI17569493, Length=253, Percent_Identity=42.6877470355731, Blast_Score=196, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI17569499, Length=235, Percent_Identity=47.6595744680851, Blast_Score=195, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI71989948, Length=231, Percent_Identity=46.7532467532467, Blast_Score=187, Evalue=7e-48,
Organism=Caenorhabditis elegans, GI17570459, Length=241, Percent_Identity=42.7385892116183, Blast_Score=183, Evalue=7e-47,
Organism=Caenorhabditis elegans, GI17569497, Length=237, Percent_Identity=41.3502109704641, Blast_Score=182, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI32566490, Length=216, Percent_Identity=46.2962962962963, Blast_Score=177, Evalue=5e-45,
Organism=Caenorhabditis elegans, GI17570161, Length=244, Percent_Identity=43.4426229508197, Blast_Score=171, Evalue=5e-43,
Organism=Caenorhabditis elegans, GI193210507, Length=244, Percent_Identity=43.4426229508197, Blast_Score=171, Evalue=6e-43,
Organism=Caenorhabditis elegans, GI71989955, Length=186, Percent_Identity=48.3870967741936, Blast_Score=154, Evalue=5e-38,
Organism=Caenorhabditis elegans, GI32564147, Length=180, Percent_Identity=35, Blast_Score=123, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI71989963, Length=124, Percent_Identity=45.9677419354839, Blast_Score=114, Evalue=6e-26,
Organism=Saccharomyces cerevisiae, GI6321571, Length=236, Percent_Identity=27.1186440677966, Blast_Score=68, Evalue=1e-12,
Organism=Drosophila melanogaster, GI45556022, Length=259, Percent_Identity=45.5598455598456, Blast_Score=204, Evalue=5e-53,
Organism=Drosophila melanogaster, GI18860517, Length=255, Percent_Identity=45.8823529411765, Blast_Score=195, Evalue=3e-50,
Organism=Drosophila melanogaster, GI62484448, Length=248, Percent_Identity=45.9677419354839, Blast_Score=189, Evalue=2e-48,
Organism=Drosophila melanogaster, GI281365664, Length=248, Percent_Identity=45.9677419354839, Blast_Score=189, Evalue=2e-48,
Organism=Drosophila melanogaster, GI24657857, Length=248, Percent_Identity=45.9677419354839, Blast_Score=189, Evalue=2e-48,
Organism=Drosophila melanogaster, GI62484274, Length=248, Percent_Identity=45.9677419354839, Blast_Score=188, Evalue=3e-48,
Organism=Drosophila melanogaster, GI28573263, Length=246, Percent_Identity=36.9918699186992, Blast_Score=167, Evalue=6e-42,
Organism=Drosophila melanogaster, GI281361631, Length=236, Percent_Identity=38.9830508474576, Blast_Score=166, Evalue=2e-41,
Organism=Drosophila melanogaster, GI281361633, Length=236, Percent_Identity=38.9830508474576, Blast_Score=166, Evalue=2e-41,
Organism=Drosophila melanogaster, GI21356845, Length=241, Percent_Identity=37.344398340249, Blast_Score=163, Evalue=1e-40,
Organism=Drosophila melanogaster, GI281361635, Length=181, Percent_Identity=43.0939226519337, Blast_Score=142, Evalue=3e-34,
Organism=Drosophila melanogaster, GI45550506, Length=176, Percent_Identity=37.5, Blast_Score=121, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 31436; Mature: 31436

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTGLFGVFIPVAILFLLFLSGVRIVNEYQNGVVFRLGRFVGLKRAGFRWLIPFVERMV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHH
IIDLRIVARDVPPQDVITRDNVSVKVNAVVYFRVIHADKAVLQVEDYLYATSQLAQTTLR
HHHHHHHHCCCCCHHCEECCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
SILGQVELDQLLSERERINHEIQQVLDARTDPWGVKVSNVEVKHIDLPAEMQRAIARQAE
HHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECEEEEEECCCHHHHHHHHHHHH
AERERRAKIIAAEGEHQAAEKLSMAAKVLGRYPATLQLRYLQTLVEITTGGNHTILPIPL
HHHHHHHEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCH
DLLRTLSGVKAHMERADDGHEDRRYTEDEEEGPPAGGLS
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQLTGLFGVFIPVAILFLLFLSGVRIVNEYQNGVVFRLGRFVGLKRAGFRWLIPFVERMV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHH
IIDLRIVARDVPPQDVITRDNVSVKVNAVVYFRVIHADKAVLQVEDYLYATSQLAQTTLR
HHHHHHHHCCCCCHHCEECCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
SILGQVELDQLLSERERINHEIQQVLDARTDPWGVKVSNVEVKHIDLPAEMQRAIARQAE
HHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECEEEEEECCCHHHHHHHHHHHH
AERERRAKIIAAEGEHQAAEKLSMAAKVLGRYPATLQLRYLQTLVEITTGGNHTILPIPL
HHHHHHHEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCH
DLLRTLSGVKAHMERADDGHEDRRYTEDEEEGPPAGGLS
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]