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The map label for this gene is rpmC

Identifier: 108760893

GI number: 108760893

Start: 3858694

End: 3858900

Strand: Direct

Name: rpmC

Synonym: MXAN_3307

Alternate gene names: 108760893

Gene position: 3858694-3858900 (Clockwise)

Preceding gene: 108759159

Following gene: 108761676

Centisome position: 42.22

GC content: 64.73

Gene sequence:

>207_bases
ATGGAGAGTGAAATGGCGACTGCGAAGGAATTGAAGGAACTGTCGGCGGACGACCTGAAGCAGCGCGCGGCCGAGCTGCG
CGAGACGCTGTTCCAGGACCAGCTGAAGCGGCGGACCGGTTCGCTGGACAACCCGGCCGAGCGCACCCAGCACCGACGGG
ACCTGGCGCGGGTTCTGACCGTGCTGACCCAGAAGACGAAGGCTTAA

Upstream 100 bases:

>100_bases
GGCGAAGCTGCCGGTGCTCACGAAGATTGTGAAGCGGGCGGACCTGAGCCTCTAAGGCACCGAGCGGCGGGAGCTGGTCC
CCTGGACAGCTTCCGCTCGC

Downstream 100 bases:

>100_bases
GGGCTGAACACCCACGACTCCAAGCGCGCTCAGCTGATAGAGGAGCGCGTGCGGCCATCCGGGCGCCAATGCCCGGGTGC
ATGAGAGACAGTGAGAGAGA

Product: 50S ribosomal protein L29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>68_residues
MESEMATAKELKELSADDLKQRAAELRETLFQDQLKRRTGSLDNPAERTQHRRDLARVLTVLTQKTKA

Sequences:

>Translated_68_residues
MESEMATAKELKELSADDLKQRAAELRETLFQDQLKRRTGSLDNPAERTQHRRDLARVLTVLTQKTKA
>Mature_68_residues
MESEMATAKELKELSADDLKQRAAELRETLFQDQLKRRTGSLDNPAERTQHRRDLARVLTVLTQKTKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL29_MYXXD (Q1D767)

Other databases:

- EMBL:   CP000113
- RefSeq:   YP_631506.1
- ProteinModelPortal:   Q1D767
- SMR:   Q1D767
- STRING:   Q1D767
- GeneID:   4102975
- GenomeReviews:   CP000113_GR
- KEGG:   mxa:MXAN_3307
- TIGR:   MXAN_3307
- OMA:   ILMVARE
- ProtClustDB:   PRK00306
- BioCyc:   MXAN246197:MXAN_3307-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00374_B
- InterPro:   IPR001854
- Gene3D:   G3DSA:1.10.287.310
- TIGRFAMs:   TIGR00012

Pfam domain/function: PF00831 Ribosomal_L29; SSF46561 Ribosomal_L29

EC number: NA

Molecular weight: Translated: 7839; Mature: 7839

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESEMATAKELKELSADDLKQRAAELRETLFQDQLKRRTGSLDNPAERTQHRRDLARVLT
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
VLTQKTKA
HHHHHHCC
>Mature Secondary Structure
MESEMATAKELKELSADDLKQRAAELRETLFQDQLKRRTGSLDNPAERTQHRRDLARVLT
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
VLTQKTKA
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA