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The map label for this gene is yqbA [H]

Identifier: 108760776

GI number: 108760776

Start: 2186644

End: 2188668

Strand: Reverse

Name: yqbA [H]

Synonym: MXAN_1868

Alternate gene names: 108760776

Gene position: 2188668-2186644 (Counterclockwise)

Preceding gene: 108760613

Following gene: 108763892

Centisome position: 23.95

GC content: 68.05

Gene sequence:

>2025_bases
TTGCCTCCACTTGGTGCGGGAGGCCCGTGTGCAGCGCGTCGTCAAAGTCTTCGTCCTCTCCTCTGCCTCGGGCGCGCCAC
ACCCGGGGCCGGAGTTCACAGTCGAGGCCTCCGCCCACGACGGATTGCTGGAGGCAGTCCACGCCGAGCTGGCGGCTCGC
GGCCAGCGCGTGCGCGCCGTCTCTCACACTCCTACGGGCCTCCTTGCCTACGTGGAGGACCGCCCGTGACGGTGCCTGCG
GAAGTCCACCTGGCAGAGGAGCGCCTCCAGGACATCCTCAAGGCGGTGGTGGTAGGGGCGCGCGTCGACGAGCCCGCCAG
CCGCCCGGGTGGTGAGGAGTCCGTAGCCTTCAGTGAGGCCGGCGCCCTCCAGCCCCCGTATGAGCCGGAGGCCCTCTGCC
TCCTCGTCGAGCACTCCAACTCCCTTCGCCAGAATGTCGATGCCTATGCGACGAACATCGACGGCTTCGGCTACCGCTTC
GAGCCCGCCATCGACTTCGACGCCGACGGGGCGCAGGAGAAGGTGGCCGACGCCATGGCCCTGGAGCGCCTGGCCGCGCG
TGACGCCGGCACGCTGCCTTCAGGGACTCCCCTACGCCCCACGGACGAGGAAGTCGCCGCACACGCGGAGGAAGTGCGTC
AGCAGGCCCGGGTGGAGAAGGCTCGCCTGGAGTCCTTCTTTGATTTCTGCTGCTTCGACTCCAGCTTCGTCGAGCTGCGC
CGCCGCACCCGCCACGACTTGGAGGTAACGGGCAACGCGTACTGGGAGGTGCTGCGCGACGGCAAGGGCGACATCGCCCG
CTTCGTCTACGTCCCCTCCTACACCGTGCGCCTCCTCCCTTTGGACAAGGAGGCCGTCGAGGTGCGCGAGCGCGTGCGCA
TCTCCGCCGTCAGCTTCGACACCGTCACAACCCGTCGGCGCCTGCGCCGCTACATCCAGGTGCAGGGCAACGAGCGGGTG
TACTTCAAGTCCTTCGGGGACTCGCGCGTCATCTCCCGCCTCACCGGCCGCGCATTCCAGGACGTCGCCGCCCTCAAGGC
CGCGGACTCCTCGGACGGCCCCGCCACGGAACTCATCCACTTCGCCATCCACTCGCCGCGCTCCCCCTACGGCATTCCTC
GCTGGGTGGGCACTCTGCTGTCCGTCCTCGGCTCCCGGCAGATGGAGGAGGTCAACTACCTCTACTTCAACAACAAGTCC
GTCCCTCCCCTGGCGCTGCTCGTCTCCGGAGGAAGGCTCTCCGACGCTTCGGTGCCGCGCATCGAGCGCTTCATCGAGGA
GAACATCAAGGGCAAGGCCAACTTCCACAAGATTCTCATCCTCGAGGCCGACGGCACCGGCACCGGCGACGGAGGCCGCG
CGAAGATTGAGCTGCGCCCCCTGACGGACGCCCAGCAGCAGGACGCCCTCTTCCAGGCCTATGACGCGCGCAACATCGAC
AAGGTGGGCAGCGCCTTCCGCCTGCCGCCACTGCTGCGCGGCGACGGTCGGGACTTCAACCGCTCGGTGGCGGAGGCGCA
GCTGCGGTTCGCCGAGGACCAGGTGTTCCAGCCCGAGCGCGACGAGTTCGACTTCTTGCTGAATCGGAAGGTGCTCGCCG
ACATGGGCGTGCGCTTCTGGCGCTTCCGCAGCCAGACGACGGCCACCAGAGACCCGGAGCGCATGACGGAGATGGTGGAG
CGTCTGGTGCGCGTGGGTGTGCTGACACCCGAGGAGGGCCGCCAGTTGGCCGGCGACATCTTCCACCGGGAGTTCCGGAA
GATTGGGGACGACTGGGTCCGACGCCCCCTCACACTCACTTTGGCGGGCATCCAAACCGGAGTCGAAGATTTGAAGCCCC
GGAAGGACAAGGACTCGCTGCTGAGCGAGGCCAAGCGACTCGTGGGCCTGCGTGAAGAGCTTCGGGCCGAGGAGGAGCGC
CTGGCCCAAGGGCGCCTGGCGCTGGCCCGCAGGTACATGGACACCGAGCACGTCCCCGTCCCCCGCGAGGAGTTCGACAC
CTGGTTCTCGGCGAGGGAGTCATGA

Upstream 100 bases:

>100_bases
TGTCCCCGAAATTGGGCCCGAGGCCTTTGTCCTCGCTGGAGGTAAGGCGCGCGGCCCCCAACGCTCCCGCACGTCGAGGG
CGCCCCTCCCACCGCGCGCC

Downstream 100 bases:

>100_bases
CGCCCGAGCAGCTCCAGCGCGCGTGGGTGCTCCAGGCCCAGGCCGATGCCGAGCGAGGTGTCCTAGAGTGCCGCATGTGC
CGAAGGCGCGGTCCCCTGGA

Product: PBSX family phage portal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 674; Mature: 673

Protein sequence:

>674_residues
MPPLGAGGPCAARRQSLRPLLCLGRATPGAGVHSRGLRPRRIAGGSPRRAGGSRPARARRLSHSYGPPCLRGGPPVTVPA
EVHLAEERLQDILKAVVVGARVDEPASRPGGEESVAFSEAGALQPPYEPEALCLLVEHSNSLRQNVDAYATNIDGFGYRF
EPAIDFDADGAQEKVADAMALERLAARDAGTLPSGTPLRPTDEEVAAHAEEVRQQARVEKARLESFFDFCCFDSSFVELR
RRTRHDLEVTGNAYWEVLRDGKGDIARFVYVPSYTVRLLPLDKEAVEVRERVRISAVSFDTVTTRRRLRRYIQVQGNERV
YFKSFGDSRVISRLTGRAFQDVAALKAADSSDGPATELIHFAIHSPRSPYGIPRWVGTLLSVLGSRQMEEVNYLYFNNKS
VPPLALLVSGGRLSDASVPRIERFIEENIKGKANFHKILILEADGTGTGDGGRAKIELRPLTDAQQQDALFQAYDARNID
KVGSAFRLPPLLRGDGRDFNRSVAEAQLRFAEDQVFQPERDEFDFLLNRKVLADMGVRFWRFRSQTTATRDPERMTEMVE
RLVRVGVLTPEEGRQLAGDIFHREFRKIGDDWVRRPLTLTLAGIQTGVEDLKPRKDKDSLLSEAKRLVGLREELRAEEER
LAQGRLALARRYMDTEHVPVPREEFDTWFSARES

Sequences:

>Translated_674_residues
MPPLGAGGPCAARRQSLRPLLCLGRATPGAGVHSRGLRPRRIAGGSPRRAGGSRPARARRLSHSYGPPCLRGGPPVTVPA
EVHLAEERLQDILKAVVVGARVDEPASRPGGEESVAFSEAGALQPPYEPEALCLLVEHSNSLRQNVDAYATNIDGFGYRF
EPAIDFDADGAQEKVADAMALERLAARDAGTLPSGTPLRPTDEEVAAHAEEVRQQARVEKARLESFFDFCCFDSSFVELR
RRTRHDLEVTGNAYWEVLRDGKGDIARFVYVPSYTVRLLPLDKEAVEVRERVRISAVSFDTVTTRRRLRRYIQVQGNERV
YFKSFGDSRVISRLTGRAFQDVAALKAADSSDGPATELIHFAIHSPRSPYGIPRWVGTLLSVLGSRQMEEVNYLYFNNKS
VPPLALLVSGGRLSDASVPRIERFIEENIKGKANFHKILILEADGTGTGDGGRAKIELRPLTDAQQQDALFQAYDARNID
KVGSAFRLPPLLRGDGRDFNRSVAEAQLRFAEDQVFQPERDEFDFLLNRKVLADMGVRFWRFRSQTTATRDPERMTEMVE
RLVRVGVLTPEEGRQLAGDIFHREFRKIGDDWVRRPLTLTLAGIQTGVEDLKPRKDKDSLLSEAKRLVGLREELRAEEER
LAQGRLALARRYMDTEHVPVPREEFDTWFSARES
>Mature_673_residues
PPLGAGGPCAARRQSLRPLLCLGRATPGAGVHSRGLRPRRIAGGSPRRAGGSRPARARRLSHSYGPPCLRGGPPVTVPAE
VHLAEERLQDILKAVVVGARVDEPASRPGGEESVAFSEAGALQPPYEPEALCLLVEHSNSLRQNVDAYATNIDGFGYRFE
PAIDFDADGAQEKVADAMALERLAARDAGTLPSGTPLRPTDEEVAAHAEEVRQQARVEKARLESFFDFCCFDSSFVELRR
RTRHDLEVTGNAYWEVLRDGKGDIARFVYVPSYTVRLLPLDKEAVEVRERVRISAVSFDTVTTRRRLRRYIQVQGNERVY
FKSFGDSRVISRLTGRAFQDVAALKAADSSDGPATELIHFAIHSPRSPYGIPRWVGTLLSVLGSRQMEEVNYLYFNNKSV
PPLALLVSGGRLSDASVPRIERFIEENIKGKANFHKILILEADGTGTGDGGRAKIELRPLTDAQQQDALFQAYDARNIDK
VGSAFRLPPLLRGDGRDFNRSVAEAQLRFAEDQVFQPERDEFDFLLNRKVLADMGVRFWRFRSQTTATRDPERMTEMVER
LVRVGVLTPEEGRQLAGDIFHREFRKIGDDWVRRPLTLTLAGIQTGVEDLKPRKDKDSLLSEAKRLVGLREELRAEEERL
AQGRLALARRYMDTEHVPVPREEFDTWFSARES

Specific function: Unknown

COG id: COG5518

COG function: function code R; Bacteriophage capsid portal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family. PBSX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944
- InterPro:   IPR016753
- InterPro:   IPR006430 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 75374; Mature: 75243

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPLGAGGPCAARRQSLRPLLCLGRATPGAGVHSRGLRPRRIAGGSPRRAGGSRPARARR
CCCCCCCCCCHHHHHCCCCEEEECCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHH
LSHSYGPPCLRGGPPVTVPAEVHLAEERLQDILKAVVVGARVDEPASRPGGEESVAFSEA
HHCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCC
GALQPPYEPEALCLLVEHSNSLRQNVDAYATNIDGFGYRFEPAIDFDADGAQEKVADAMA
CCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHH
LERLAARDAGTLPSGTPLRPTDEEVAAHAEEVRQQARVEKARLESFFDFCCFDSSFVELR
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
RRTRHDLEVTGNAYWEVLRDGKGDIARFVYVPSYTVRLLPLDKEAVEVRERVRISAVSFD
HHHCCCEEECCHHHHHHHHCCCCCEEEEEEECCCEEEEEECCHHHHHHHHHHHHHEEEHH
TVTTRRRLRRYIQVQGNERVYFKSFGDSRVISRLTGRAFQDVAALKAADSSDGPATELIH
HHHHHHHHHHHHEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
FAIHSPRSPYGIPRWVGTLLSVLGSRQMEEVNYLYFNNKSVPPLALLVSGGRLSDASVPR
HHHCCCCCCCCCHHHHHHHHHHHCCCHHHHCEEEEECCCCCCCEEEEEECCCCCCCCCHH
IERFIEENIKGKANFHKILILEADGTGTGDGGRAKIELRPLTDAQQQDALFQAYDARNID
HHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCHH
KVGSAFRLPPLLRGDGRDFNRSVAEAQLRFAEDQVFQPERDEFDFLLNRKVLADMGVRFW
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHH
RFRSQTTATRDPERMTEMVERLVRVGVLTPEEGRQLAGDIFHREFRKIGDDWVRRPLTLT
HHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
LAGIQTGVEDLKPRKDKDSLLSEAKRLVGLREELRAEEERLAQGRLALARRYMDTEHVPV
EHHHHHCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PREEFDTWFSARES
CHHHHHHHHHCCCC
>Mature Secondary Structure 
PPLGAGGPCAARRQSLRPLLCLGRATPGAGVHSRGLRPRRIAGGSPRRAGGSRPARARR
CCCCCCCCCHHHHHCCCCEEEECCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHH
LSHSYGPPCLRGGPPVTVPAEVHLAEERLQDILKAVVVGARVDEPASRPGGEESVAFSEA
HHCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCC
GALQPPYEPEALCLLVEHSNSLRQNVDAYATNIDGFGYRFEPAIDFDADGAQEKVADAMA
CCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHH
LERLAARDAGTLPSGTPLRPTDEEVAAHAEEVRQQARVEKARLESFFDFCCFDSSFVELR
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
RRTRHDLEVTGNAYWEVLRDGKGDIARFVYVPSYTVRLLPLDKEAVEVRERVRISAVSFD
HHHCCCEEECCHHHHHHHHCCCCCEEEEEEECCCEEEEEECCHHHHHHHHHHHHHEEEHH
TVTTRRRLRRYIQVQGNERVYFKSFGDSRVISRLTGRAFQDVAALKAADSSDGPATELIH
HHHHHHHHHHHHEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
FAIHSPRSPYGIPRWVGTLLSVLGSRQMEEVNYLYFNNKSVPPLALLVSGGRLSDASVPR
HHHCCCCCCCCCHHHHHHHHHHHCCCHHHHCEEEEECCCCCCCEEEEEECCCCCCCCCHH
IERFIEENIKGKANFHKILILEADGTGTGDGGRAKIELRPLTDAQQQDALFQAYDARNID
HHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCHH
KVGSAFRLPPLLRGDGRDFNRSVAEAQLRFAEDQVFQPERDEFDFLLNRKVLADMGVRFW
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHH
RFRSQTTATRDPERMTEMVERLVRVGVLTPEEGRQLAGDIFHREFRKIGDDWVRRPLTLT
HHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
LAGIQTGVEDLKPRKDKDSLLSEAKRLVGLREELRAEEERLAQGRLALARRYMDTEHVPV
EHHHHHCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PREEFDTWFSARES
CHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]