| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is yuxL [H]
Identifier: 108760758
GI number: 108760758
Start: 6600741
End: 6602876
Strand: Direct
Name: yuxL [H]
Synonym: MXAN_5299
Alternate gene names: 108760758
Gene position: 6600741-6602876 (Clockwise)
Preceding gene: 108756963
Following gene: 108762141
Centisome position: 72.22
GC content: 67.28
Gene sequence:
>2136_bases GTGCCACCGCCGCTTCGCAGCGCCTTCCCGCGTCGGAGCAGTTGGGACCGGCGGCTGTGCGCCGGAGCCAACCTCGCACC CGACGCAGGCAAGGGGTGTGCGCTGAGCCCTCCTCCTGGCGCGGTGCCACGCCTTCCATCTGGAAACTCGTCTCCCGCCC CCAATCACGCCACAGTCTCTTGCACGCCCCTGCTCCACCGCCCGACTTGTGGAACCCCCATGACCTCCTGGTCCACCCTC ACGCGAGCCCTTGTCGCCGTCGTGGTCCTTCCCTCACTGGCGCTGTCCGCTCCCCGCGCCGGGGCGACCAGGCCCCCAGG CCCGGAAAAGCGTTACACCGTCGAGCAGTTCATGGAGACGACCTCCGTTCTCGGTGCGTCCTTCTCCTCGGATGAGAAGC GGGTGCTGTACTCGTCGAACGAGACCGGCGTCTTCAATGTCTTCTCCGTCCCGGTGACGGGCGGAAAGCCCACGCAACTG ACCCGCTCCACCCAGGACGCCTCCATCGCCGTCGCCTACTTCCCCACCGATGACCGCGTCCTCTTCACGCGAGACTCGGG AGGCAACGAACTCGTCCACCTCTACGTCCGCACGCTGGACGGCCAGGAGAAGGACCTCACGCCGGGCGACGAGCACCGCG CGTCCTTCTTCGGCTGGAGCCAGGACGGCGCCGCCTTCTACGTCCTCACCAATGAGCGCGACGCACGCTTCCAGGACCTC TACCGCTACGACGCCAAGACGTATGCCCGCACCCTGCTCTACGCGGGCGATAGCGAGCATGTGCCCGGCGCCCTCTCCCC GGACGAGAAGTGGCTGGCGCTGGAGAAGTCACGGACGCTGTCCGACAGCGACGTCTACCTCTACGAGTTCGCCACCCAGC AGCGTCGGCACCTCACCGCGCACGAGGGCTCGGTCAGTTGGAAGGCGGCGACCTTCGACCCGGCGTCCTCCGCGCTGTAC CTGCTCACCAACGAGGGCTCCGAGTTCATTCGCGTGGAGCGCCACGTGCTCGCTACCCGGAAGCGAGAGTTGGTGGAGCA GGTGGAGTGGGACGTGCTTTCCACGGTGTTCTCGCGACGCGGCGCGTGGCGCATCACCCGCGTCAACGAGGACGGCCGCA CCACGCTTCGGGTCCACGACGTGAAGGCCGGCAGGCGCGTGTCCCTGCCAGGGATTCCAGAGGGGGCGATCTCCGGTGTG AGTCTGTCCCGCGGTGAGAAGCGCATGGCCTTCCACGTCGACGGAGACCGCTCGCCCGGCAACCTGTACGTCTACGACTT CGAGACGAAGAAGCTCACCCGGCTGACCGACACGCTGGGCCGGGCTCTGGACACCCAGCACCTGGTGGAGTCGGAGCGGG TGCGCTTCAAGTCCTTCGACGGGCTGGAGATTCCGGCGCTGCTCTACAAGCCCCATCAGGCCACCGCGAAGCAGCGCGCC CCCGCCATCGTCTTCGTCCATGGGGGACCGGGAGGACAGTCCTCCAAGGGCTACAGCAGCTTCTTCCAGTTCCTCGTCCA CCACGGCTACGTGGTGCTCGCCGTCAACAACCGGGGCAGCGAGGGCTACGGCAAGTCGTTCTTCGCGGCGGATGACCAGC AGCACGGCAAGGCGCCGCTCCAGGATTGCGTCGAGGCGAAGAAGTACCTGGCCGCCCTCCCCTACGTGGATGGCGCGCGC GTGGGCATCCTGGGCCCCAGCTACGGCGGATACATGGTGCTCGCGGCGCTGGCGTTCCATCCCGACGTCTTCGCCGTGGG CGTGGATGCGTTCGGCATCTCAGACTGGCTGAGCGCGCTGCGAGAGCTGCCGCCCCACAAGGAGGCCCTGCGCGAGGCAC TCTACCAGGAACTGGGCAACCCCCAGACGCAGGAAGCGATGCTTCGAGAAATCTCCCCGCTGTTCCATGCGGAGAAGATT CGCAGGCCCCTGCTCGTCATCCAGGGCGCCAACGACCCGCGCGTGCCCCAGGCCAAGACGGACGCGCTCGTCGAGGCCGT CCGGAAGAACGGCGTGCCCGTCGACTACTTCGTCCTCCCCAATGATGGCCATGGCTTCAGCAGCACGAAGAGCGAAGCGG AGACCTCCGTCAGAATCCTCTCCTTCCTGGACCGGTACCTCCGACGGAGCCCCTGA
Upstream 100 bases:
>100_bases ATGTCAGTGCAAAACCGGTGCAGAGGCCCGCTTCCTCTGAGGACGCGAGCCCGGGCCGGTCCGTTCCTGACAGCGGCGTC CTGGCGCGCCGCCTACGCGG
Downstream 100 bases:
>100_bases AGCCGCGAGCACGGCTTCGCACTTGTGCAATTGCATGCACAGTGGCTGACACGGCCTTCTGTTATTTCATGGGGTTTCGC ATTGGCATGCCCCTTGATGG
Product: S9C family peptidase
Products: Hydrolyzed protein [C]
Alternate protein names: NA
Number of amino acids: Translated: 711; Mature: 710
Protein sequence:
>711_residues MPPPLRSAFPRRSSWDRRLCAGANLAPDAGKGCALSPPPGAVPRLPSGNSSPAPNHATVSCTPLLHRPTCGTPMTSWSTL TRALVAVVVLPSLALSAPRAGATRPPGPEKRYTVEQFMETTSVLGASFSSDEKRVLYSSNETGVFNVFSVPVTGGKPTQL TRSTQDASIAVAYFPTDDRVLFTRDSGGNELVHLYVRTLDGQEKDLTPGDEHRASFFGWSQDGAAFYVLTNERDARFQDL YRYDAKTYARTLLYAGDSEHVPGALSPDEKWLALEKSRTLSDSDVYLYEFATQQRRHLTAHEGSVSWKAATFDPASSALY LLTNEGSEFIRVERHVLATRKRELVEQVEWDVLSTVFSRRGAWRITRVNEDGRTTLRVHDVKAGRRVSLPGIPEGAISGV SLSRGEKRMAFHVDGDRSPGNLYVYDFETKKLTRLTDTLGRALDTQHLVESERVRFKSFDGLEIPALLYKPHQATAKQRA PAIVFVHGGPGGQSSKGYSSFFQFLVHHGYVVLAVNNRGSEGYGKSFFAADDQQHGKAPLQDCVEAKKYLAALPYVDGAR VGILGPSYGGYMVLAALAFHPDVFAVGVDAFGISDWLSALRELPPHKEALREALYQELGNPQTQEAMLREISPLFHAEKI RRPLLVIQGANDPRVPQAKTDALVEAVRKNGVPVDYFVLPNDGHGFSSTKSEAETSVRILSFLDRYLRRSP
Sequences:
>Translated_711_residues MPPPLRSAFPRRSSWDRRLCAGANLAPDAGKGCALSPPPGAVPRLPSGNSSPAPNHATVSCTPLLHRPTCGTPMTSWSTL TRALVAVVVLPSLALSAPRAGATRPPGPEKRYTVEQFMETTSVLGASFSSDEKRVLYSSNETGVFNVFSVPVTGGKPTQL TRSTQDASIAVAYFPTDDRVLFTRDSGGNELVHLYVRTLDGQEKDLTPGDEHRASFFGWSQDGAAFYVLTNERDARFQDL YRYDAKTYARTLLYAGDSEHVPGALSPDEKWLALEKSRTLSDSDVYLYEFATQQRRHLTAHEGSVSWKAATFDPASSALY LLTNEGSEFIRVERHVLATRKRELVEQVEWDVLSTVFSRRGAWRITRVNEDGRTTLRVHDVKAGRRVSLPGIPEGAISGV SLSRGEKRMAFHVDGDRSPGNLYVYDFETKKLTRLTDTLGRALDTQHLVESERVRFKSFDGLEIPALLYKPHQATAKQRA PAIVFVHGGPGGQSSKGYSSFFQFLVHHGYVVLAVNNRGSEGYGKSFFAADDQQHGKAPLQDCVEAKKYLAALPYVDGAR VGILGPSYGGYMVLAALAFHPDVFAVGVDAFGISDWLSALRELPPHKEALREALYQELGNPQTQEAMLREISPLFHAEKI RRPLLVIQGANDPRVPQAKTDALVEAVRKNGVPVDYFVLPNDGHGFSSTKSEAETSVRILSFLDRYLRRSP >Mature_710_residues PPPLRSAFPRRSSWDRRLCAGANLAPDAGKGCALSPPPGAVPRLPSGNSSPAPNHATVSCTPLLHRPTCGTPMTSWSTLT RALVAVVVLPSLALSAPRAGATRPPGPEKRYTVEQFMETTSVLGASFSSDEKRVLYSSNETGVFNVFSVPVTGGKPTQLT RSTQDASIAVAYFPTDDRVLFTRDSGGNELVHLYVRTLDGQEKDLTPGDEHRASFFGWSQDGAAFYVLTNERDARFQDLY RYDAKTYARTLLYAGDSEHVPGALSPDEKWLALEKSRTLSDSDVYLYEFATQQRRHLTAHEGSVSWKAATFDPASSALYL LTNEGSEFIRVERHVLATRKRELVEQVEWDVLSTVFSRRGAWRITRVNEDGRTTLRVHDVKAGRRVSLPGIPEGAISGVS LSRGEKRMAFHVDGDRSPGNLYVYDFETKKLTRLTDTLGRALDTQHLVESERVRFKSFDGLEIPALLYKPHQATAKQRAP AIVFVHGGPGGQSSKGYSSFFQFLVHHGYVVLAVNNRGSEGYGKSFFAADDQQHGKAPLQDCVEAKKYLAALPYVDGARV GILGPSYGGYMVLAALAFHPDVFAVGVDAFGISDWLSALRELPPHKEALREALYQELGNPQTQEAMLREISPLFHAEKIR RPLLVIQGANDPRVPQAKTDALVEAVRKNGVPVDYFVLPNDGHGFSSTKSEAETSVRILSFLDRYLRRSP
Specific function: Cleaves Peptide Bonds On The C-Terminal Side Of Lysyl And Argininyl Residues. [C]
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9B family [H]
Homologues:
Organism=Homo sapiens, GI37577089, Length=267, Percent_Identity=30.7116104868914, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI18450280, Length=267, Percent_Identity=30.7116104868914, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI194394146, Length=270, Percent_Identity=28.1481481481481, Blast_Score=100, Evalue=4e-21, Organism=Homo sapiens, GI23510451, Length=270, Percent_Identity=23.7037037037037, Blast_Score=89, Evalue=2e-17, Organism=Homo sapiens, GI41349456, Length=582, Percent_Identity=22.680412371134, Blast_Score=83, Evalue=1e-15, Organism=Homo sapiens, GI295842403, Length=261, Percent_Identity=25.6704980842912, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI85787627, Length=261, Percent_Identity=25.6704980842912, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI52426756, Length=261, Percent_Identity=25.6704980842912, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI295842359, Length=261, Percent_Identity=25.6704980842912, Blast_Score=82, Evalue=3e-15, Organism=Homo sapiens, GI295849272, Length=261, Percent_Identity=25.6704980842912, Blast_Score=81, Evalue=3e-15, Organism=Caenorhabditis elegans, GI25144537, Length=634, Percent_Identity=24.7634069400631, Blast_Score=178, Evalue=8e-45, Organism=Caenorhabditis elegans, GI25144540, Length=338, Percent_Identity=32.2485207100592, Blast_Score=166, Evalue=5e-41, Organism=Caenorhabditis elegans, GI17552908, Length=271, Percent_Identity=29.520295202952, Blast_Score=112, Evalue=5e-25, Organism=Caenorhabditis elegans, GI25144543, Length=543, Percent_Identity=22.4677716390424, Blast_Score=111, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17508019, Length=310, Percent_Identity=26.7741935483871, Blast_Score=93, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17508017, Length=310, Percent_Identity=26.7741935483871, Blast_Score=93, Evalue=6e-19, Organism=Caenorhabditis elegans, GI25149159, Length=267, Percent_Identity=25.0936329588015, Blast_Score=74, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17564632, Length=243, Percent_Identity=27.5720164609054, Blast_Score=69, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17564634, Length=243, Percent_Identity=27.5720164609054, Blast_Score=69, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6324793, Length=236, Percent_Identity=25.8474576271186, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI45550825, Length=249, Percent_Identity=28.5140562248996, Blast_Score=98, Evalue=2e-20, Organism=Drosophila melanogaster, GI45553511, Length=249, Percent_Identity=28.5140562248996, Blast_Score=98, Evalue=2e-20, Organism=Drosophila melanogaster, GI45551969, Length=249, Percent_Identity=28.1124497991968, Blast_Score=98, Evalue=2e-20, Organism=Drosophila melanogaster, GI221510989, Length=469, Percent_Identity=24.0938166311301, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI24583414, Length=421, Percent_Identity=24.9406175771971, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI24582257, Length=221, Percent_Identity=25.7918552036199, Blast_Score=72, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR011659 - InterPro: IPR001375 [H]
Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]
EC number: 3.4.21.83 [C]
Molecular weight: Translated: 78264; Mature: 78133
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: PS00708 PRO_ENDOPEP_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPPLRSAFPRRSSWDRRLCAGANLAPDAGKGCALSPPPGAVPRLPSGNSSPAPNHATVS CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE CTPLLHRPTCGTPMTSWSTLTRALVAVVVLPSLALSAPRAGATRPPGPEKRYTVEQFMET EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH TSVLGASFSSDEKRVLYSSNETGVFNVFSVPVTGGKPTQLTRSTQDASIAVAYFPTDDRV HHHHCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCCEECCCCCCEEEEEEECCCCEE LFTRDSGGNELVHLYVRTLDGQEKDLTPGDEHRASFFGWSQDGAAFYVLTNERDARFQDL EEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCEEEEEEECCCCHHHHHH YRYDAKTYARTLLYAGDSEHVPGALSPDEKWLALEKSRTLSDSDVYLYEFATQQRRHLTA HHHHHHHHHHEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEHHHHHHHEEC HEGSVSWKAATFDPASSALYLLTNEGSEFIRVERHVLATRKRELVEQVEWDVLSTVFSRR CCCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GAWRITRVNEDGRTTLRVHDVKAGRRVSLPGIPEGAISGVSLSRGEKRMAFHVDGDRSPG CCEEEEEECCCCCEEEEEEECCCCCEECCCCCCCCCCCCCEECCCCCEEEEEECCCCCCC NLYVYDFETKKLTRLTDTLGRALDTQHLVESERVRFKSFDGLEIPALLYKPHQATAKQRA EEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEECCCHHHHHHCC PAIVFVHGGPGGQSSKGYSSFFQFLVHHGYVVLAVNNRGSEGYGKSFFAADDQQHGKAPL CEEEEEECCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEECCCCCCCCCHH QDCVEAKKYLAALPYVDGARVGILGPSYGGYMVLAALAFHPDVFAVGVDAFGISDWLSAL HHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH RELPPHKEALREALYQELGNPQTQEAMLREISPLFHAEKIRRPLLVIQGANDPRVPQAKT HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHH DALVEAVRKNGVPVDYFVLPNDGHGFSSTKSEAETSVRILSFLDRYLRRSP HHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PPPLRSAFPRRSSWDRRLCAGANLAPDAGKGCALSPPPGAVPRLPSGNSSPAPNHATVS CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE CTPLLHRPTCGTPMTSWSTLTRALVAVVVLPSLALSAPRAGATRPPGPEKRYTVEQFMET EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH TSVLGASFSSDEKRVLYSSNETGVFNVFSVPVTGGKPTQLTRSTQDASIAVAYFPTDDRV HHHHCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCCEECCCCCCEEEEEEECCCCEE LFTRDSGGNELVHLYVRTLDGQEKDLTPGDEHRASFFGWSQDGAAFYVLTNERDARFQDL EEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCEEEEEEECCCCHHHHHH YRYDAKTYARTLLYAGDSEHVPGALSPDEKWLALEKSRTLSDSDVYLYEFATQQRRHLTA HHHHHHHHHHEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEHHHHHHHEEC HEGSVSWKAATFDPASSALYLLTNEGSEFIRVERHVLATRKRELVEQVEWDVLSTVFSRR CCCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GAWRITRVNEDGRTTLRVHDVKAGRRVSLPGIPEGAISGVSLSRGEKRMAFHVDGDRSPG CCEEEEEECCCCCEEEEEEECCCCCEECCCCCCCCCCCCCEECCCCCEEEEEECCCCCCC NLYVYDFETKKLTRLTDTLGRALDTQHLVESERVRFKSFDGLEIPALLYKPHQATAKQRA EEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEECCCHHHHHHCC PAIVFVHGGPGGQSSKGYSSFFQFLVHHGYVVLAVNNRGSEGYGKSFFAADDQQHGKAPL CEEEEEECCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEECCCCCCCCCHH QDCVEAKKYLAALPYVDGARVGILGPSYGGYMVLAALAFHPDVFAVGVDAFGISDWLSAL HHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH RELPPHKEALREALYQELGNPQTQEAMLREISPLFHAEKIRRPLLVIQGANDPRVPQAKT HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHH DALVEAVRKNGVPVDYFVLPNDGHGFSSTKSEAETSVRILSFLDRYLRRSP HHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Ca2+ [C]
Kcat value (1/min): 11820 [C]
Specific activity: NA
Km value (mM): 0.92 {benzoyl-Lys} 0.6 {N-benzoyl-Arg} 0.23 {tosyl-Arg} 0.5 {benzoyl-Arg} 0.48 {benzoyl-Arg} 0.25 {benzoyl-Arg} 0.33 {N-benzyloxycarbonyl-Lys} 0.31 {N-benzyloxycarbonyl-Lys} 80 {acetyl-tyrosine} 0.47 {tosyl-Lys-methyl} [C]
Substrates: Protein; H2O [C]
Specific reaction: Protein + H2O = hydrolyzed protein [C]
General reaction: Peptide bond hydrolysis [C]
Inhibitor: Antipain; Aromaticamidines; Benzamidine; Co2+; DFP; Fe2+; Hg2+; L-Arginine; Leupeptin sulfhydryl agents, trypsin inhibitors, 1, 10-phenanthroline; p-Aminobenzamidine; Tosyl -Leuchloromethyl ketone; Zn2+ [C]
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 3098560 [H]