| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108760718
Identifier: 108760718
GI number: 108760718
Start: 7028861
End: 7029742
Strand: Reverse
Name: 108760718
Synonym: MXAN_5665
Alternate gene names: NA
Gene position: 7029742-7028861 (Counterclockwise)
Preceding gene: 108761774
Following gene: 108758509
Centisome position: 76.91
GC content: 68.82
Gene sequence:
>882_bases GTGCTTCCCAAGGACCTCATCCGCCGCATTCGCAAGCTGGAGATTCGCACCCGCAAGGTGGTCTCCGACATGCTCGCCGG CCAGTACCATTCGGTCTTCAAGGGCCGGGGCATGGCCTTCTCCGAGGTGCGCCAGTACCAGCCCGGTGACGAGATTCGCA TCATCGACTGGAACGTCACCGCGCGCATGGATGAGGCCTACGTCAAGGTCTTCACCGAGGAGCGCGAGCTGACGGTGATG CTGGTGGTGGACGTCTCCGCGTCGAAGGAGTTCGGCTCGCGCGAGCGCACCAAGTCGGAGGTCGCCGCGGAGGTGGCGGC GCAGATCGCGTTCAGCGCCATCGCCAACAATGACCGGGTGGGGCTGGTCCTCTTCTCGGACCGGGTGGAGAAGGTGGTGC CGCCGCGCAAGGGCCGCACGCACGTGCTGCGGCTGGTGAGCGACATCCTCACGTTCCAGCCGCAGGGGCGGGGGACGGAC CTGGCCGCGGGGCTCAACTACCTGACGCGGGTGGCGAAGCGGAAGGCGGTGACGTTCCTCATCTCCGACTTCCAGGCGCG CGACTACGAGAAGCCGCTGCGGCTGGTGGGGCGCAAGCACGACCTGGTGCCGGTGGTGGTGGCGGACCCGATGGAGGAGG CCTTCCCCCGGCTGGGCCTGGTGGACATGGAGGACCCGGAGACGGGCGAGCGCTTCGTCGTCGACACCAGCGACCCGCGC GTGCGAGGCCGCTTCGCCCGGGCCATGCAGGCCGCGCGTGACGAGCGGCGCAAGCTGTTCAAGAAGCTGGAGCTGGACCA CGTGGAGCTGCGCGCGGGTGATGACCACGGCAAGGCGCTGGCGAACTTCTTCCGCGCGCGGGCCCGGAGGATGGCGGCAT GA
Upstream 100 bases:
>100_bases GGCGGAGGCGGAAGACCTCACGCCGGAGAAAATCATCCAGCGCGTGTTCGACCGCGTCGAAGTCCCCTGACCCTTCTTCC TCGAGCCCGCCAGGCGCCCC
Downstream 100 bases:
>100_bases ACCGGCTTATCCCCCTGCTGGCGGTGTGGCTCGTGGTGGCGGCGCTGGTGGTGGCGGCTCCGGCGTGGGCCCAGGCTCCG GCCCCTGCACCGGCGCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MLPKDLIRRIRKLEIRTRKVVSDMLAGQYHSVFKGRGMAFSEVRQYQPGDEIRIIDWNVTARMDEAYVKVFTEERELTVM LVVDVSASKEFGSRERTKSEVAAEVAAQIAFSAIANNDRVGLVLFSDRVEKVVPPRKGRTHVLRLVSDILTFQPQGRGTD LAAGLNYLTRVAKRKAVTFLISDFQARDYEKPLRLVGRKHDLVPVVVADPMEEAFPRLGLVDMEDPETGERFVVDTSDPR VRGRFARAMQAARDERRKLFKKLELDHVELRAGDDHGKALANFFRARARRMAA
Sequences:
>Translated_293_residues MLPKDLIRRIRKLEIRTRKVVSDMLAGQYHSVFKGRGMAFSEVRQYQPGDEIRIIDWNVTARMDEAYVKVFTEERELTVM LVVDVSASKEFGSRERTKSEVAAEVAAQIAFSAIANNDRVGLVLFSDRVEKVVPPRKGRTHVLRLVSDILTFQPQGRGTD LAAGLNYLTRVAKRKAVTFLISDFQARDYEKPLRLVGRKHDLVPVVVADPMEEAFPRLGLVDMEDPETGERFVVDTSDPR VRGRFARAMQAARDERRKLFKKLELDHVELRAGDDHGKALANFFRARARRMAA >Mature_293_residues MLPKDLIRRIRKLEIRTRKVVSDMLAGQYHSVFKGRGMAFSEVRQYQPGDEIRIIDWNVTARMDEAYVKVFTEERELTVM LVVDVSASKEFGSRERTKSEVAAEVAAQIAFSAIANNDRVGLVLFSDRVEKVVPPRKGRTHVLRLVSDILTFQPQGRGTD LAAGLNYLTRVAKRKAVTFLISDFQARDYEKPLRLVGRKHDLVPVVVADPMEEAFPRLGLVDMEDPETGERFVVDTSDPR VRGRFARAMQAARDERRKLFKKLELDHVELRAGDDHGKALANFFRARARRMAA
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.avium MAV169 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002881 - InterPro: IPR002035 [H]
Pfam domain/function: PF01882 DUF58 [H]
EC number: NA
Molecular weight: Translated: 33396; Mature: 33396
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPKDLIRRIRKLEIRTRKVVSDMLAGQYHSVFKGRGMAFSEVRQYQPGDEIRIIDWNVT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEECCE ARMDEAYVKVFTEERELTVMLVVDVSASKEFGSRERTKSEVAAEVAAQIAFSAIANNDRV EHHHHHHHHHEECCCCEEEEEEEEECCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE GLVLFSDRVEKVVPPRKGRTHVLRLVSDILTFQPQGRGTDLAAGLNYLTRVAKRKAVTFL EEEEECCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ISDFQARDYEKPLRLVGRKHDLVPVVVADPMEEAFPRLGLVDMEDPETGERFVVDTSDPR HHHHHHCCHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCCEECCCCCCCCEEEEECCCCH VRGRFARAMQAARDERRKLFKKLELDHVELRAGDDHGKALANFFRARARRMAA HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLPKDLIRRIRKLEIRTRKVVSDMLAGQYHSVFKGRGMAFSEVRQYQPGDEIRIIDWNVT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEECCE ARMDEAYVKVFTEERELTVMLVVDVSASKEFGSRERTKSEVAAEVAAQIAFSAIANNDRV EHHHHHHHHHEECCCCEEEEEEEEECCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE GLVLFSDRVEKVVPPRKGRTHVLRLVSDILTFQPQGRGTDLAAGLNYLTRVAKRKAVTFL EEEEECCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ISDFQARDYEKPLRLVGRKHDLVPVVVADPMEEAFPRLGLVDMEDPETGERFVVDTSDPR HHHHHHCCHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCCEECCCCCCCCEEEEECCCCH VRGRFARAMQAARDERRKLFKKLELDHVELRAGDDHGKALANFFRARARRMAA HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]