| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is mtaD [H]
Identifier: 108760686
GI number: 108760686
Start: 7072608
End: 7073954
Strand: Reverse
Name: mtaD [H]
Synonym: MXAN_5705
Alternate gene names: 108760686
Gene position: 7073954-7072608 (Counterclockwise)
Preceding gene: 108758788
Following gene: 108761018
Centisome position: 77.4
GC content: 71.34
Gene sequence:
>1347_bases GTGGATTTGCTCCTGACTGGTGGCACGGTTGTAACGATGAACCGCGAGCGCGAGGTGCTCGTGGATGCGGACGTCCTCGT CCAGGATGGCCGCATCGCCAAGGTGGGCCGGGGCCTCAAGCCTCGCGGCACCCGGCGGGTGGTGGACGTGACGGGAAAGG TGGTGCTGCCGGGCCTCATCCACGGCCACCTCCACGCTTGTCAGACGCTCTTTCGTGGCCGCGCGGACGGGCTGGAGTTG CTGGACTGGCTCCGCGAGCGCATCTGGCCCTTCGAGGCCTCGCACGACGCCGCGTCCATGCGGGCCTCGGCGGACCTGAC CTTCGCGGAGCTCATCCGCTCGGGCGCCACGGCGGCGCTCGATATGGGCAGCGTGTACCACTACGACGCCGTCTTCGAGT CGGCGCGGGACTCCGGCTTCCGGCTGGTGGGCGGCAAGGCGATGATGGACGCGGGCGCGGGCGTCCCCGCGGGCCTGCGT GAGAGCACCGAGGACTCCCTGAAGGAGAGCCTCGCCCTGAAGGAGCGCTGGCACGGCACGCACGGCGGCCGGCTGCGCTA CGCCTTCGCCCCGCGCTTCGTGCTGTCCTGCACCCCGGAGCTGCTGCGCGAGGTGGCGCGGCTGGCCAAGGAGCACGGGC TGCGCATCCACACCCACGCCAGTGAGAACGCGAAGGAGACGGACGCGGTCCGCCAGTACACCGGTGGCGAGGACAACGTG GCCTTCTTCCACACGGTGGGGATGTCCGGCCCGCACGTGACGATGGCCCACTGCGTGTGGCTGTCCCAGGAGGAGCAGGA CATCCTGCGCGACACCCGCACGGTGGTGTGCCACTGCCCCGGCTCCAACCTCAAGCTGGCGTCGGGCATCGCCAAGGTGC CGGAGTTGCTGGAGGCCGGCGTGGCGGTGGCGCTGGGCGCGGACGGTGCGCCCTGCAACAACACGCTCGACATCTTCTAC GAGATGAAGCTCGCCGCGGTGATGCACAACCCGCGCGTGGGGCCGTGCGCGATGACGCCCATGCGCGTGCTGGAGATGGC CACGCTGCACGGCGCCCGGGCGCTGGGCCTGGAGGACGAGGTGGGCTCGCTGGAGCCCGGCAAGCGCGCCGACATCACCG TGGTGGACGTCAGCGGCCTGCACGCGGGCCCCACGCCCGAGGACGTGCTGGTGCCGCTGGTGCACTCCGCGCGGGGCAGC GACGTGGCGCACGTCTTCATCGACGGCCAGCCGGTGCTGCGCGATGGGGTGCTCACCACGTTGGACGCGCCCTCCGTCCT GGCGAACGCGAACGCGCAGGTGGCGCGCATCCTCAAGCGCCGCCAGAAGAAGGCGCGCAGCGGCTGA
Upstream 100 bases:
>100_bases GCCGGACGCCCCAGGGCGGCGAGGCGCGCTACACCCTGGGAGGCCTGCTGCCGCATGCCTTCACCAAAGACTTCTTCTAG CGAGAGAGCCTGAGCACGCC
Downstream 100 bases:
>100_bases GGCTCAGGCCGGCAGCCGCAGCACGAAGGACGTGGACCATCCGGGCGCGTCCTCCACCGCCAACCGCCCGCCGTGGGCCT CCGCGGCGAGCCGGCAGAAG
Product: N-ethylammeline chlorohydrolase
Products: NA
Alternate protein names: MTA/SAH deaminase [H]
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MDLLLTGGTVVTMNREREVLVDADVLVQDGRIAKVGRGLKPRGTRRVVDVTGKVVLPGLIHGHLHACQTLFRGRADGLEL LDWLRERIWPFEASHDAASMRASADLTFAELIRSGATAALDMGSVYHYDAVFESARDSGFRLVGGKAMMDAGAGVPAGLR ESTEDSLKESLALKERWHGTHGGRLRYAFAPRFVLSCTPELLREVARLAKEHGLRIHTHASENAKETDAVRQYTGGEDNV AFFHTVGMSGPHVTMAHCVWLSQEEQDILRDTRTVVCHCPGSNLKLASGIAKVPELLEAGVAVALGADGAPCNNTLDIFY EMKLAAVMHNPRVGPCAMTPMRVLEMATLHGARALGLEDEVGSLEPGKRADITVVDVSGLHAGPTPEDVLVPLVHSARGS DVAHVFIDGQPVLRDGVLTTLDAPSVLANANAQVARILKRRQKKARSG
Sequences:
>Translated_448_residues MDLLLTGGTVVTMNREREVLVDADVLVQDGRIAKVGRGLKPRGTRRVVDVTGKVVLPGLIHGHLHACQTLFRGRADGLEL LDWLRERIWPFEASHDAASMRASADLTFAELIRSGATAALDMGSVYHYDAVFESARDSGFRLVGGKAMMDAGAGVPAGLR ESTEDSLKESLALKERWHGTHGGRLRYAFAPRFVLSCTPELLREVARLAKEHGLRIHTHASENAKETDAVRQYTGGEDNV AFFHTVGMSGPHVTMAHCVWLSQEEQDILRDTRTVVCHCPGSNLKLASGIAKVPELLEAGVAVALGADGAPCNNTLDIFY EMKLAAVMHNPRVGPCAMTPMRVLEMATLHGARALGLEDEVGSLEPGKRADITVVDVSGLHAGPTPEDVLVPLVHSARGS DVAHVFIDGQPVLRDGVLTTLDAPSVLANANAQVARILKRRQKKARSG >Mature_448_residues MDLLLTGGTVVTMNREREVLVDADVLVQDGRIAKVGRGLKPRGTRRVVDVTGKVVLPGLIHGHLHACQTLFRGRADGLEL LDWLRERIWPFEASHDAASMRASADLTFAELIRSGATAALDMGSVYHYDAVFESARDSGFRLVGGKAMMDAGAGVPAGLR ESTEDSLKESLALKERWHGTHGGRLRYAFAPRFVLSCTPELLREVARLAKEHGLRIHTHASENAKETDAVRQYTGGEDNV AFFHTVGMSGPHVTMAHCVWLSQEEQDILRDTRTVVCHCPGSNLKLASGIAKVPELLEAGVAVALGADGAPCNNTLDIFY EMKLAAVMHNPRVGPCAMTPMRVLEMATLHGARALGLEDEVGSLEPGKRADITVVDVSGLHAGPTPEDVLVPLVHSARGS DVAHVFIDGQPVLRDGVLTTLDAPSVLANANAQVARILKRRQKKARSG
Specific function: Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MTA/SAH deaminase family [H]
Homologues:
Organism=Homo sapiens, GI4758426, Length=382, Percent_Identity=28.5340314136126, Blast_Score=153, Evalue=3e-37, Organism=Escherichia coli, GI1789249, Length=366, Percent_Identity=33.0601092896175, Blast_Score=189, Evalue=3e-49, Organism=Escherichia coli, GI87082177, Length=456, Percent_Identity=25, Blast_Score=83, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17540282, Length=396, Percent_Identity=26.010101010101, Blast_Score=99, Evalue=6e-21, Organism=Saccharomyces cerevisiae, GI6319963, Length=348, Percent_Identity=25.2873563218391, Blast_Score=114, Evalue=2e-26, Organism=Drosophila melanogaster, GI24643849, Length=391, Percent_Identity=27.6214833759591, Blast_Score=125, Evalue=6e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.4.28 [H]
Molecular weight: Translated: 48240; Mature: 48240
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLLLTGGTVVTMNREREVLVDADVLVQDGRIAKVGRGLKPRGTRRVVDVTGKVVLPGLI CCEEEECCEEEEECCCCEEEEECCEEEECCCCHHHCCCCCCCCCEEEEEECCCEEECHHH HGHLHACQTLFRGRADGLELLDWLRERIWPFEASHDAASMRASADLTFAELIRSGATAAL HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHHHHCCCCEEE DMGSVYHYDAVFESARDSGFRLVGGKAMMDAGAGVPAGLRESTEDSLKESLALKERWHGT ECCCCHHHHHHHHHHCCCCEEEECCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC HGGRLRYAFAPRFVLSCTPELLREVARLAKEHGLRIHTHASENAKETDAVRQYTGGEDNV CCCEEEEEECCCHHHHCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCCE AFFHTVGMSGPHVTMAHCVWLSQEEQDILRDTRTVVCHCPGSNLKLASGIAKVPELLEAG EEEEEECCCCCCEEEEEEEECCCCHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCC VAVALGADGAPCNNTLDIFYEMKLAAVMHNPRVGPCAMTPMRVLEMATLHGARALGLEDE EEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC VGSLEPGKRADITVVDVSGLHAGPTPEDVLVPLVHSARGSDVAHVFIDGQPVLRDGVLTT CCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHCCCEEE LDAPSVLANANAQVARILKRRQKKARSG CCCCHHHHCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDLLLTGGTVVTMNREREVLVDADVLVQDGRIAKVGRGLKPRGTRRVVDVTGKVVLPGLI CCEEEECCEEEEECCCCEEEEECCEEEECCCCHHHCCCCCCCCCEEEEEECCCEEECHHH HGHLHACQTLFRGRADGLELLDWLRERIWPFEASHDAASMRASADLTFAELIRSGATAAL HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHHHHCCCCEEE DMGSVYHYDAVFESARDSGFRLVGGKAMMDAGAGVPAGLRESTEDSLKESLALKERWHGT ECCCCHHHHHHHHHHCCCCEEEECCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC HGGRLRYAFAPRFVLSCTPELLREVARLAKEHGLRIHTHASENAKETDAVRQYTGGEDNV CCCEEEEEECCCHHHHCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCCE AFFHTVGMSGPHVTMAHCVWLSQEEQDILRDTRTVVCHCPGSNLKLASGIAKVPELLEAG EEEEEECCCCCCEEEEEEEECCCCHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCC VAVALGADGAPCNNTLDIFYEMKLAAVMHNPRVGPCAMTPMRVLEMATLHGARALGLEDE EEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC VGSLEPGKRADITVVDVSGLHAGPTPEDVLVPLVHSARGSDVAHVFIDGQPVLRDGVLTT CCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHCCCEEE LDAPSVLANANAQVARILKRRQKKARSG CCCCHHHHCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA