| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is aatA [H]
Identifier: 108760679
GI number: 108760679
Start: 3935172
End: 3936362
Strand: Direct
Name: aatA [H]
Synonym: MXAN_3386
Alternate gene names: 108760679
Gene position: 3935172-3936362 (Clockwise)
Preceding gene: 108763591
Following gene: 108763738
Centisome position: 43.06
GC content: 68.77
Gene sequence:
>1191_bases ATGAAACTCGCTCACCGGCTCCAGGCCATCAAGCCGTCTCCGACGCTCGCTCTCAACTCGCGCGCCAAGGCGCTCGTCGC CAAGGGTGTGGATGTAGTAGTCCTGGCCGCGGGAGAGCCGGACTTCGACACGCCGGATTACGTGAAGCAGGCCGCGGTGG ACGCACTGCGAGCGGGCTTCACCAAGTACACCCCGACCAACGGCATCCCGGAGCTGCGCGAGGCCATCTGCGCCAAGCTC GAGCGGGACAACGGCTTGCGCTACACGCCGGACCAGGTGCTCGTCACGTCCGGTGGCAAGCAGGGCCTCTACAACTTCTG CCAGGCGGCGCTGGAGGAGGGGGACGAGGTCATCATCTTCGCGCCCTTCTGGGTCAGCTACCCGGACATGGTGCGGCTGG CGGGTGCCACGCCCGTCATCGTCCCCACGCGCGAGGAGGACGGCTTCGCGCCGGACCCGGACGCCATCCGCCGCGCGCTC ACGCCGCGCACGCGCGCCGTCATCATCAACAGCCCAGGCAATCCCACCGGCGCCGTCTATTCGCGCGCGGCGCTGGAGCG CATCGCGGAGGTGCTGCGGCCCCACGACTGCCTCATCGTCACGGACGACATCTACGAGAAGCTGCTCTACACCGACGAAC GCCTGGGCATCAGCGACGTAGCGCCGGACCTGGTGCCGCGGCTGGTGGTCGTGAACGGCATGAGCAAGGCGTACTCCATG ACGGGCTGGCGCATGGGCTACGTCGCCGGGCCCAAGCCGCTTTTGGCCGGCATGCAGATGGTGCAGGACCAGTCCACGTC CAACGCCTCCTCCATTGGCCAGAAGGCCGCGCTGGCGGCGTTGCAGGGGCCGCCGGACACCATCGCCGCCATGGTGAAGG AGTACCGCGAGCGCCGTGACTTCTTCATCGCGGGACTGAACGCGCTGGATGGCGTGCGCTGCCGGATGCCCGAGGGCGCC TTCTACGCCTTCGCGGACGTGCGGGGCCTGCTGGGCCGGTCGTACAAGGGCAAGCCGGTGACGTCCGCGATGCAGCTGTC GGAAATCCTCCTCGACGACTTCCGCGTCGCCGCCGTGCCCGGCGAGCCGTTCGGCGCGGAGGGCTACGTGCGCATGAGCT TCGTCACCTCGCGCGAGGTGCTGCAGAAGGGCCTTGCCCGGCTGGGTGAGCTGGTCAAGGCCCTGAGCTGA
Upstream 100 bases:
>100_bases TGCCGCCCAACGTGCACGAAGGTTTGAAGGCCAAGTTCGCTGGACGGAAGTAGCAGGCAGTCCCCTTGTCCGGAGTGGGG CTCCGCGTTAGGCAGGGGAC
Downstream 100 bases:
>100_bases CCGCTCAGTCCGTGTAGGCGAAGGCGCGGAACTCGTCGCGGTACTTGCGGTAGACGAGGACAGCGGGGCGGCCGGAGATG TTACCCACGGCCGTCCACAC
Product: putative aspartate aminotransferase
Products: NA
Alternate protein names: AspAT; Transaminase A [H]
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MKLAHRLQAIKPSPTLALNSRAKALVAKGVDVVVLAAGEPDFDTPDYVKQAAVDALRAGFTKYTPTNGIPELREAICAKL ERDNGLRYTPDQVLVTSGGKQGLYNFCQAALEEGDEVIIFAPFWVSYPDMVRLAGATPVIVPTREEDGFAPDPDAIRRAL TPRTRAVIINSPGNPTGAVYSRAALERIAEVLRPHDCLIVTDDIYEKLLYTDERLGISDVAPDLVPRLVVVNGMSKAYSM TGWRMGYVAGPKPLLAGMQMVQDQSTSNASSIGQKAALAALQGPPDTIAAMVKEYRERRDFFIAGLNALDGVRCRMPEGA FYAFADVRGLLGRSYKGKPVTSAMQLSEILLDDFRVAAVPGEPFGAEGYVRMSFVTSREVLQKGLARLGELVKALS
Sequences:
>Translated_396_residues MKLAHRLQAIKPSPTLALNSRAKALVAKGVDVVVLAAGEPDFDTPDYVKQAAVDALRAGFTKYTPTNGIPELREAICAKL ERDNGLRYTPDQVLVTSGGKQGLYNFCQAALEEGDEVIIFAPFWVSYPDMVRLAGATPVIVPTREEDGFAPDPDAIRRAL TPRTRAVIINSPGNPTGAVYSRAALERIAEVLRPHDCLIVTDDIYEKLLYTDERLGISDVAPDLVPRLVVVNGMSKAYSM TGWRMGYVAGPKPLLAGMQMVQDQSTSNASSIGQKAALAALQGPPDTIAAMVKEYRERRDFFIAGLNALDGVRCRMPEGA FYAFADVRGLLGRSYKGKPVTSAMQLSEILLDDFRVAAVPGEPFGAEGYVRMSFVTSREVLQKGLARLGELVKALS >Mature_396_residues MKLAHRLQAIKPSPTLALNSRAKALVAKGVDVVVLAAGEPDFDTPDYVKQAAVDALRAGFTKYTPTNGIPELREAICAKL ERDNGLRYTPDQVLVTSGGKQGLYNFCQAALEEGDEVIIFAPFWVSYPDMVRLAGATPVIVPTREEDGFAPDPDAIRRAL TPRTRAVIINSPGNPTGAVYSRAALERIAEVLRPHDCLIVTDDIYEKLLYTDERLGISDVAPDLVPRLVVVNGMSKAYSM TGWRMGYVAGPKPLLAGMQMVQDQSTSNASSIGQKAALAALQGPPDTIAAMVKEYRERRDFFIAGLNALDGVRCRMPEGA FYAFADVRGLLGRSYKGKPVTSAMQLSEILLDDFRVAAVPGEPFGAEGYVRMSFVTSREVLQKGLARLGELVKALS
Specific function: Unknown
COG id: COG0436
COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI56713254, Length=398, Percent_Identity=29.6482412060301, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI56713256, Length=398, Percent_Identity=29.6482412060301, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI95147551, Length=345, Percent_Identity=28.9855072463768, Blast_Score=155, Evalue=5e-38, Organism=Homo sapiens, GI169881279, Length=345, Percent_Identity=28.9855072463768, Blast_Score=155, Evalue=5e-38, Organism=Homo sapiens, GI169881281, Length=344, Percent_Identity=23.8372093023256, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI7705897, Length=363, Percent_Identity=24.7933884297521, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI33469970, Length=363, Percent_Identity=24.7933884297521, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI4507369, Length=377, Percent_Identity=22.2811671087533, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI215599424, Length=394, Percent_Identity=22.8426395939086, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI19263340, Length=394, Percent_Identity=22.8426395939086, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI4885351, Length=375, Percent_Identity=24.8, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI1786816, Length=375, Percent_Identity=29.0666666666667, Blast_Score=167, Evalue=9e-43, Organism=Escherichia coli, GI1788627, Length=369, Percent_Identity=30.3523035230352, Blast_Score=142, Evalue=4e-35, Organism=Escherichia coli, GI1788722, Length=406, Percent_Identity=26.1083743842365, Blast_Score=137, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17567369, Length=383, Percent_Identity=26.1096605744125, Blast_Score=132, Evalue=4e-31, Organism=Caenorhabditis elegans, GI71994472, Length=326, Percent_Identity=26.3803680981595, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI71994476, Length=326, Percent_Identity=26.3803680981595, Blast_Score=120, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17567663, Length=384, Percent_Identity=23.9583333333333, Blast_Score=96, Evalue=4e-20, Organism=Caenorhabditis elegans, GI71981209, Length=371, Percent_Identity=21.5633423180593, Blast_Score=70, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6322401, Length=392, Percent_Identity=25.765306122449, Blast_Score=132, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6320317, Length=355, Percent_Identity=22.8169014084507, Blast_Score=76, Evalue=1e-14, Organism=Drosophila melanogaster, GI28573069, Length=416, Percent_Identity=30.2884615384615, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI24646114, Length=416, Percent_Identity=30.2884615384615, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI28573067, Length=416, Percent_Identity=30.2884615384615, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI28573065, Length=416, Percent_Identity=30.2884615384615, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI24641770, Length=368, Percent_Identity=23.6413043478261, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24641760, Length=368, Percent_Identity=23.6413043478261, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24641768, Length=368, Percent_Identity=23.6413043478261, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24641766, Length=368, Percent_Identity=23.6413043478261, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24641764, Length=368, Percent_Identity=23.6413043478261, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI18859735, Length=388, Percent_Identity=21.3917525773196, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI45551451, Length=368, Percent_Identity=23.6413043478261, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001176 - InterPro: IPR004839 - InterPro: IPR004838 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.1 [H]
Molecular weight: Translated: 42893; Mature: 42893
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: PS00105 AA_TRANSFER_CLASS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLAHRLQAIKPSPTLALNSRAKALVAKGVDVVVLAAGEPDFDTPDYVKQAAVDALRAGF CCHHHHHHHCCCCCCEEECCHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCC TKYTPTNGIPELREAICAKLERDNGLRYTPDQVLVTSGGKQGLYNFCQAALEEGDEVIIF CCCCCCCCCHHHHHHHHHHHHCCCCCEECCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE APFWVSYPDMVRLAGATPVIVPTREEDGFAPDPDAIRRALTPRTRAVIINSPGNPTGAVY CCHHHCCHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCHHHH SRAALERIAEVLRPHDCLIVTDDIYEKLLYTDERLGISDVAPDLVPRLVVVNGMSKAYSM HHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHCCCHHHHHC TGWRMGYVAGPKPLLAGMQMVQDQSTSNASSIGQKAALAALQGPPDTIAAMVKEYRERRD CCCEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC FFIAGLNALDGVRCRMPEGAFYAFADVRGLLGRSYKGKPVTSAMQLSEILLDDFRVAAVP EEEECCCHHCCCEEECCCCCEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEECC GEPFGAEGYVRMSFVTSREVLQKGLARLGELVKALS CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKLAHRLQAIKPSPTLALNSRAKALVAKGVDVVVLAAGEPDFDTPDYVKQAAVDALRAGF CCHHHHHHHCCCCCCEEECCHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCC TKYTPTNGIPELREAICAKLERDNGLRYTPDQVLVTSGGKQGLYNFCQAALEEGDEVIIF CCCCCCCCCHHHHHHHHHHHHCCCCCEECCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE APFWVSYPDMVRLAGATPVIVPTREEDGFAPDPDAIRRALTPRTRAVIINSPGNPTGAVY CCHHHCCHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCHHHH SRAALERIAEVLRPHDCLIVTDDIYEKLLYTDERLGISDVAPDLVPRLVVVNGMSKAYSM HHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHCCCHHHHHC TGWRMGYVAGPKPLLAGMQMVQDQSTSNASSIGQKAALAALQGPPDTIAAMVKEYRERRD CCCEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC FFIAGLNALDGVRCRMPEGAFYAFADVRGLLGRSYKGKPVTSAMQLSEILLDDFRVAAVP EEEECCCHHCCCEEECCCCCEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEECC GEPFGAEGYVRMSFVTSREVLQKGLARLGELVKALS CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA