| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is phoR [H]
Identifier: 108760671
GI number: 108760671
Start: 239406
End: 241313
Strand: Direct
Name: phoR [H]
Synonym: MXAN_0196
Alternate gene names: 108760671
Gene position: 239406-241313 (Clockwise)
Preceding gene: 108761729
Following gene: 108763154
Centisome position: 2.62
GC content: 71.59
Gene sequence:
>1908_bases ATGCGCTACAAAGGGACAGAGAATCTGGATTTCCGGGCAGGCAAGCAAGGGGGCTTCGATGACCCTGGCAGGCGCGGGAT GGGGACGGCGCCCCTTCTGCTGTTCTGTGGAAACACGGAGGCTGCCCTTCGTCCGGGGAAGGAGACATGCCTCCATGTTG CCTCTGCTCGCGGGAAGTCCCTCATGGCCTCTGGAAGCGCCCCGCTTTCGATGACGCATCTGGACTCCGAAGAGGCGGAC GCCCTGCTGAAGGAGGGCGTCCTCCGGTTGCTGCTCGAGCAGGCGGGCGAGGCGCTCGTGTTGGTGGATGTCACCGGGCG TGTGCTCGCCTTCAACACGGAGGCCGGGCGTCAGTTCCGTATGAGCCGGCCCGAACGCGCCGAGCAGGGTTGGTTGCCCG GTTGTGTATGGACGCGTGCGGAGGATGCGTCCATGTCGGTGGAGGTGCCGCCCCTGGCGCGCGCGCTCACGGGCGAGTGG GTGGCGGAGGCCCGCTGGCGGGTGCGCCGGCCGGATGGGACGCACGTCCTGCTGCGCGCCTCCGCGGTGCCGCTGGAGCA CGACGCGGGCCCGACGGCTGGAGCGCTGCTTCGCGCATGTGAGGTGGCCTCGGCCGTGGGGTTGGACGCGGTGGGCTCGG CGCGGCTGCTGGCGGAGGCCGGTGCGCTGCTGGGCGCCGCGTTCGACGATGAGGCCGCGCCGCGGTTGCTCCGCTTGCTG GTGCCCGCGCTCGCGGACGCGGCGGTGCTGTACCTGGGCCAGCCCGGCGGGCCGCCGCGCCCGGTGACGGCGCTGCACGC CGAGCCGGAGCGCCATGGCCTGCTGGAGGAGATGCTGCGCTGCTACCCATTGCCGCCTGAGCGCGTGCTGCCGTTGTTCG GCACTGGCCAGTCGGAGCGGTTGCGGGTGACGGAGGCCCACGTGGAGGCCACCGCGCGGGACGCGGAGCACGCGCGGCTG CTGCGGGGGCTGGGCCTGCGCTGCTACCTGGGCGTGCCGCTGGTGGCGCGCGAGCGCGTCATCGGCACGCTGGCCCTCTT CCGCGCGGATGAAGCCCGTGACTTCAGCGCGGAGGAGCTGCGGCTGGCGGAGGAGGTGGCCCGCCGCACCGCGCTCTCCG TGGACAACGCGCAGCTCCTCCAGGAGGCGCGCGAGGCGGTGCGCCTGCGCGACGAGTTCCTGGGAATCGCCAGTCACGAG CTGAAGACGCCGCTGACGCCGCTGCACCTCAAGGTGCAATTGCTGCAGAAGCAGGTGGATGGGATGGCGGCCCACAACCA GCCGGTGTCCGCCGAGCGCGTGTCGGAGACGCTGGAGGTGGTGCAGCGGCAGGTGCGCAAGCTGACGAGCCTGGTGGACA ACCTGCTCGATGTGTCGCGAATCACCGCGGGCCGCCTGCGGCTGGAAGTGGAGGAGATGGACCTGGCCAGCGTGGCGGCG GAAATCCTCTACCGCTTCGCGCCCTCCGCCTCGCAGTTGAAGTGTGAGCTGGAGCTGCACGCGCCGGTGCCCGTCATGGG CCGGTGGGACCGGCTGCGGCTGGAGCAGGTGGTGACCAACCTGCTGTCCAACGCGCTGAAGTACGGCGCGGGACACCCCG TGCGCGTGGTGGTGGAGGCGGAGGGGCTCACCGCCCGCCTGACGGTGCGCGACGGCGGCATCGGCATCTCCGCGGAGGAT TTGCCGCGCATCTTCGAGCGCTTCGAGCGCGCGGTGAGTGACAGGCACTACGGCGGCCTGGGCCTGGGGCTCTACATCAC CCGGCAGATTGTGGAGGCCTTCGGCGGCACGGTGCGCGCCACCAGCGAGCCGGGGCAGGGCTCCCTCTTCGTGCTGGAGC TGCCGCGCGGCGACATCCCCGAGGAATGGCTGACGGCGCACGGCGCGCCGGAGCCGTCGTCGTCCTGA
Upstream 100 bases:
>100_bases GTAACGGTGCTCGTTGGAGGTCCAGTCAGGCGTGGAGTGCGGCTTCTGCATGATGGAACTCGAGAAAGTGGGCCGCGCGG GTGGACGCAAGGTCACCCGG
Downstream 100 bases:
>100_bases CGCGCTAGGCCGCGCTCGCGGATGCCGCGGGCTCGGCGCGGCGGGGCAGCCGCACGTGGAAGCTGCTGCCGCGCTGGGGC CCCGGGCTCTCCGCCCAGAT
Product: sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 635; Mature: 635
Protein sequence:
>635_residues MRYKGTENLDFRAGKQGGFDDPGRRGMGTAPLLLFCGNTEAALRPGKETCLHVASARGKSLMASGSAPLSMTHLDSEEAD ALLKEGVLRLLLEQAGEALVLVDVTGRVLAFNTEAGRQFRMSRPERAEQGWLPGCVWTRAEDASMSVEVPPLARALTGEW VAEARWRVRRPDGTHVLLRASAVPLEHDAGPTAGALLRACEVASAVGLDAVGSARLLAEAGALLGAAFDDEAAPRLLRLL VPALADAAVLYLGQPGGPPRPVTALHAEPERHGLLEEMLRCYPLPPERVLPLFGTGQSERLRVTEAHVEATARDAEHARL LRGLGLRCYLGVPLVARERVIGTLALFRADEARDFSAEELRLAEEVARRTALSVDNAQLLQEAREAVRLRDEFLGIASHE LKTPLTPLHLKVQLLQKQVDGMAAHNQPVSAERVSETLEVVQRQVRKLTSLVDNLLDVSRITAGRLRLEVEEMDLASVAA EILYRFAPSASQLKCELELHAPVPVMGRWDRLRLEQVVTNLLSNALKYGAGHPVRVVVEAEGLTARLTVRDGGIGISAED LPRIFERFERAVSDRHYGGLGLGLYITRQIVEAFGGTVRATSEPGQGSLFVLELPRGDIPEEWLTAHGAPEPSSS
Sequences:
>Translated_635_residues MRYKGTENLDFRAGKQGGFDDPGRRGMGTAPLLLFCGNTEAALRPGKETCLHVASARGKSLMASGSAPLSMTHLDSEEAD ALLKEGVLRLLLEQAGEALVLVDVTGRVLAFNTEAGRQFRMSRPERAEQGWLPGCVWTRAEDASMSVEVPPLARALTGEW VAEARWRVRRPDGTHVLLRASAVPLEHDAGPTAGALLRACEVASAVGLDAVGSARLLAEAGALLGAAFDDEAAPRLLRLL VPALADAAVLYLGQPGGPPRPVTALHAEPERHGLLEEMLRCYPLPPERVLPLFGTGQSERLRVTEAHVEATARDAEHARL LRGLGLRCYLGVPLVARERVIGTLALFRADEARDFSAEELRLAEEVARRTALSVDNAQLLQEAREAVRLRDEFLGIASHE LKTPLTPLHLKVQLLQKQVDGMAAHNQPVSAERVSETLEVVQRQVRKLTSLVDNLLDVSRITAGRLRLEVEEMDLASVAA EILYRFAPSASQLKCELELHAPVPVMGRWDRLRLEQVVTNLLSNALKYGAGHPVRVVVEAEGLTARLTVRDGGIGISAED LPRIFERFERAVSDRHYGGLGLGLYITRQIVEAFGGTVRATSEPGQGSLFVLELPRGDIPEEWLTAHGAPEPSSS >Mature_635_residues MRYKGTENLDFRAGKQGGFDDPGRRGMGTAPLLLFCGNTEAALRPGKETCLHVASARGKSLMASGSAPLSMTHLDSEEAD ALLKEGVLRLLLEQAGEALVLVDVTGRVLAFNTEAGRQFRMSRPERAEQGWLPGCVWTRAEDASMSVEVPPLARALTGEW VAEARWRVRRPDGTHVLLRASAVPLEHDAGPTAGALLRACEVASAVGLDAVGSARLLAEAGALLGAAFDDEAAPRLLRLL VPALADAAVLYLGQPGGPPRPVTALHAEPERHGLLEEMLRCYPLPPERVLPLFGTGQSERLRVTEAHVEATARDAEHARL LRGLGLRCYLGVPLVARERVIGTLALFRADEARDFSAEELRLAEEVARRTALSVDNAQLLQEAREAVRLRDEFLGIASHE LKTPLTPLHLKVQLLQKQVDGMAAHNQPVSAERVSETLEVVQRQVRKLTSLVDNLLDVSRITAGRLRLEVEEMDLASVAA EILYRFAPSASQLKCELELHAPVPVMGRWDRLRLEQVVTNLLSNALKYGAGHPVRVVVEAEGLTARLTVRDGGIGISAED LPRIFERFERAVSDRHYGGLGLGLYITRQIVEAFGGTVRATSEPGQGSLFVLELPRGDIPEEWLTAHGAPEPSSS
Specific function: Member of the two-component regulatory system phoP/phoR involved in the alkaline phosphatase genes regulation. PhoR may function as a membrane-associated protein kinase that phosphorylates phoP in response to environmental signals [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1789149, Length=246, Percent_Identity=34.5528455284553, Blast_Score=126, Evalue=4e-30, Organism=Escherichia coli, GI145693157, Length=262, Percent_Identity=31.2977099236641, Blast_Score=115, Evalue=7e-27, Organism=Escherichia coli, GI1786912, Length=301, Percent_Identity=31.2292358803987, Blast_Score=108, Evalue=1e-24, Organism=Escherichia coli, GI1788393, Length=249, Percent_Identity=33.3333333333333, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1788713, Length=242, Percent_Identity=25.2066115702479, Blast_Score=99, Evalue=1e-21, Organism=Escherichia coli, GI87081816, Length=265, Percent_Identity=32.0754716981132, Blast_Score=96, Evalue=1e-20, Organism=Escherichia coli, GI48994928, Length=250, Percent_Identity=31.2, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI1786600, Length=279, Percent_Identity=29.3906810035842, Blast_Score=89, Evalue=9e-19, Organism=Escherichia coli, GI1790346, Length=229, Percent_Identity=32.7510917030568, Blast_Score=86, Evalue=1e-17, Organism=Escherichia coli, GI87082128, Length=231, Percent_Identity=29.8701298701299, Blast_Score=76, Evalue=6e-15, Organism=Escherichia coli, GI1786783, Length=242, Percent_Identity=27.2727272727273, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI1790436, Length=221, Percent_Identity=28.9592760180996, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1789808, Length=209, Percent_Identity=28.7081339712919, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1787894, Length=234, Percent_Identity=32.0512820512821, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1788549, Length=229, Percent_Identity=26.6375545851528, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 68881; Mature: 68881
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYKGTENLDFRAGKQGGFDDPGRRGMGTAPLLLFCGNTEAALRPGKETCLHVASARGKS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHCCCCHHHHHHHHHHCCCE LMASGSAPLSMTHLDSEEADALLKEGVLRLLLEQAGEALVLVDVTGRVLAFNTEAGRQFR EEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCCCCCC MSRPERAEQGWLPGCVWTRAEDASMSVEVPPLARALTGEWVAEARWRVRRPDGTHVLLRA CCCCCHHHCCCCCCEEEECCCCCCCEEECCHHHHHHHHHHHHHCCCEEECCCCCEEEEEE SAVPLEHDAGPTAGALLRACEVASAVGLDAVGSARLLAEAGALLGAAFDDEAAPRLLRLL CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH VPALADAAVLYLGQPGGPPRPVTALHAEPERHGLLEEMLRCYPLPPERVLPLFGTGQSER HHHHHCCEEEEEECCCCCCCCEEEECCCCHHCCHHHHHHHHCCCCHHHCCEEECCCCCCE LRVTEAHVEATARDAEHARLLRGLGLRCYLGVPLVARERVIGTLALFRADEARDFSAEEL EEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHH RLAEEVARRTALSVDNAQLLQEAREAVRLRDEFLGIASHELKTPLTPLHLKVQLLQKQVD HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH GMAAHNQPVSAERVSETLEVVQRQVRKLTSLVDNLLDVSRITAGRLRLEVEEMDLASVAA CHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHH EILYRFAPSASQLKCELELHAPVPVMGRWDRLRLEQVVTNLLSNALKYGAGHPVRVVVEA HHHHHHCCCHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE EGLTARLTVRDGGIGISAEDLPRIFERFERAVSDRHYGGLGLGLYITRQIVEAFGGTVRA CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEE TSEPGQGSLFVLELPRGDIPEEWLTAHGAPEPSSS CCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCC >Mature Secondary Structure MRYKGTENLDFRAGKQGGFDDPGRRGMGTAPLLLFCGNTEAALRPGKETCLHVASARGKS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHCCCCHHHHHHHHHHCCCE LMASGSAPLSMTHLDSEEADALLKEGVLRLLLEQAGEALVLVDVTGRVLAFNTEAGRQFR EEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCCCCCC MSRPERAEQGWLPGCVWTRAEDASMSVEVPPLARALTGEWVAEARWRVRRPDGTHVLLRA CCCCCHHHCCCCCCEEEECCCCCCCEEECCHHHHHHHHHHHHHCCCEEECCCCCEEEEEE SAVPLEHDAGPTAGALLRACEVASAVGLDAVGSARLLAEAGALLGAAFDDEAAPRLLRLL CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH VPALADAAVLYLGQPGGPPRPVTALHAEPERHGLLEEMLRCYPLPPERVLPLFGTGQSER HHHHHCCEEEEEECCCCCCCCEEEECCCCHHCCHHHHHHHHCCCCHHHCCEEECCCCCCE LRVTEAHVEATARDAEHARLLRGLGLRCYLGVPLVARERVIGTLALFRADEARDFSAEEL EEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHH RLAEEVARRTALSVDNAQLLQEAREAVRLRDEFLGIASHELKTPLTPLHLKVQLLQKQVD HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH GMAAHNQPVSAERVSETLEVVQRQVRKLTSLVDNLLDVSRITAGRLRLEVEEMDLASVAA CHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHH EILYRFAPSASQLKCELELHAPVPVMGRWDRLRLEQVVTNLLSNALKYGAGHPVRVVVEA HHHHHHCCCHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE EGLTARLTVRDGGIGISAEDLPRIFERFERAVSDRHYGGLGLGLYITRQIVEAFGGTVRA CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEE TSEPGQGSLFVLELPRGDIPEEWLTAHGAPEPSSS CCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3142862; 9387221; 9384377 [H]