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The map label for this gene is yobV [H]

Identifier: 108760639

GI number: 108760639

Start: 6242872

End: 6243603

Strand: Direct

Name: yobV [H]

Synonym: MXAN_4992

Alternate gene names: 108760639

Gene position: 6242872-6243603 (Clockwise)

Preceding gene: 108758086

Following gene: 108761793

Centisome position: 68.3

GC content: 72.54

Gene sequence:

>732_bases
ATGGCACGAGTCGACCGGGTAATGCGGCTGCTGGACTTCCTGCGGGGACGGGATGGGACGACGGTGGCGGAGATCTCCGA
GGCGCTCGAAGTGAGCGCACGCACTGTCCACCGGGACCTGGCGACGCTGCGGGAACAGGGCATTCCCCTGAGCAGCGACA
CAGGCCCTGGGGGCGGCGTCCGGCTGGAACGGGACCGGGGCGTGGCGGCCGTCCACCTGTCGCAGGAGGAAGTAGTGGCG
CTCTGGCTGGCCGCCAACCTGTCCGCGACGGGCAGCACGTTGCCCTGGGGCGGCGCGGCGCGCTCGGGGCTCCAGAAGCT
CTTCGCCAGTGTCCCCAAGGAGCGGGCCCGGGGAATGCGCGAGCTCTGCCGCCGCGTGGTCGTGGGACGACCCGCGAGCG
CCCGCGTGCTGAAGGACGTCGGCACACCGCCCGAGGAGCTGCTCGCCGTCTTCGAGCGGGCCTTCCGCGAGCAGGTCTGC
CTCTCCTTCGAGTACCGCGACCGGCACGGCAAGGCGACTCGCCGCATCGTGGAGCCGCACGGGCTGCTGGTGGAGTCGCC
CGTCTGGTACGTGCTGGCCCGGGACGTGGAGAAGGCCGCGGCGCGCATGTTCCGCATGGATCGCATCCGCCGGGCCCGCC
TCGTCCCCGACCGCCCCTTCACGCCCGACATGGAGGGCTTGCGAGCCCAGGCCGATGCCCAGCGCGCGAACGGTACGCGA
GCCCCAGGCTGA

Upstream 100 bases:

>100_bases
TGGACCCCATCATGACGGCCTCCTCTGGCCTCGAAGCGCGCAGTCGTGCGCGACGTGATGCTTGTGGAGTACGGCCCATC
CCTGACAGAAACTGTCAGCA

Downstream 100 bases:

>100_bases
GGTAGGCTGCGCGCCCGCCGGAGCCGGAGTGCGCGCCGGAGTCACCAGGAGTCACACGGTGCGGTACTTCGCCATGGTCG
CGGCCGGGGCCACCCTCTGG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MARVDRVMRLLDFLRGRDGTTVAEISEALEVSARTVHRDLATLREQGIPLSSDTGPGGGVRLERDRGVAAVHLSQEEVVA
LWLAANLSATGSTLPWGGAARSGLQKLFASVPKERARGMRELCRRVVVGRPASARVLKDVGTPPEELLAVFERAFREQVC
LSFEYRDRHGKATRRIVEPHGLLVESPVWYVLARDVEKAAARMFRMDRIRRARLVPDRPFTPDMEGLRAQADAQRANGTR
APG

Sequences:

>Translated_243_residues
MARVDRVMRLLDFLRGRDGTTVAEISEALEVSARTVHRDLATLREQGIPLSSDTGPGGGVRLERDRGVAAVHLSQEEVVA
LWLAANLSATGSTLPWGGAARSGLQKLFASVPKERARGMRELCRRVVVGRPASARVLKDVGTPPEELLAVFERAFREQVC
LSFEYRDRHGKATRRIVEPHGLLVESPVWYVLARDVEKAAARMFRMDRIRRARLVPDRPFTPDMEGLRAQADAQRANGTR
APG
>Mature_242_residues
ARVDRVMRLLDFLRGRDGTTVAEISEALEVSARTVHRDLATLREQGIPLSSDTGPGGGVRLERDRGVAAVHLSQEEVVAL
WLAANLSATGSTLPWGGAARSGLQKLFASVPKERARGMRELCRRVVVGRPASARVLKDVGTPPEELLAVFERAFREQVCL
SFEYRDRHGKATRRIVEPHGLLVESPVWYVLARDVEKAAARMFRMDRIRRARLVPDRPFTPDMEGLRAQADAQRANGTRA
PG

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 26910; Mature: 26779

Theoretical pI: Translated: 11.18; Mature: 11.18

Prosite motif: PS00894 HTH_DEOR_1 ; PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARVDRVMRLLDFLRGRDGTTVAEISEALEVSARTVHRDLATLREQGIPLSSDTGPGGGV
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE
RLERDRGVAAVHLSQEEVVALWLAANLSATGSTLPWGGAARSGLQKLFASVPKERARGMR
EEECCCCEEEEEECHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHH
ELCRRVVVGRPASARVLKDVGTPPEELLAVFERAFREQVCLSFEYRDRHGKATRRIVEPH
HHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC
GLLVESPVWYVLARDVEKAAARMFRMDRIRRARLVPDRPFTPDMEGLRAQADAQRANGTR
CCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCC
APG
CCC
>Mature Secondary Structure 
ARVDRVMRLLDFLRGRDGTTVAEISEALEVSARTVHRDLATLREQGIPLSSDTGPGGGV
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE
RLERDRGVAAVHLSQEEVVALWLAANLSATGSTLPWGGAARSGLQKLFASVPKERARGMR
EEECCCCEEEEEECHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHH
ELCRRVVVGRPASARVLKDVGTPPEELLAVFERAFREQVCLSFEYRDRHGKATRRIVEPH
HHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC
GLLVESPVWYVLARDVEKAAARMFRMDRIRRARLVPDRPFTPDMEGLRAQADAQRANGTR
CCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCC
APG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]