| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108760618
Identifier: 108760618
GI number: 108760618
Start: 1796183
End: 1796848
Strand: Reverse
Name: 108760618
Synonym: MXAN_1530
Alternate gene names: NA
Gene position: 1796848-1796183 (Counterclockwise)
Preceding gene: 108758278
Following gene: 108764035
Centisome position: 19.66
GC content: 65.47
Gene sequence:
>666_bases ATGTCCTCGAAAGCTGCCTTCTTCGATGTCGACGGGACGCTCGTGAAGACGAACGTCGTCCACGTCTACGCGTACTACGC GATGAACCGCGGCTCCGTCCTGGGCATCGCGGGGCGGACCCTGAGCACCGCCCTCAGCGTGCCGCTCTTCGGTGTCATGG ACGCGGTGGACCGCAAGACGTTCAACGAGTTCTTCTACCGCTACTACGCGGGCCTGAGCGAAGACCGCCTGGTCACCATC GCCGAGGACATGTTCGAGGACGTGCTGCAGCCCGCCCTCTTCGAGCAGACGCAGGACCTCATCGACCAGGCTCGCCGCAG CGGCTGCAAGATTGTCCTCGTCACGGGCGCGCTGGACTTCACCATGCGCCCGCTGGCGCGCCACCTGGGCGCCGACGACA TGATCGCCAACAAGATGCAGTTCGTGGGCGGCAAGGCGACCGGCAAGGTGATTCCGCCCATCATCGAAGGCGCGAACAAG GCGAACGCCATCCGCGCCTACTGCACCAAGGAAGGCCTGTCGCTGGACAAGTGCCACGGCTACTCCGACAGCGCCTCTGA CTACGCGATGCTCGCGGTGGTGGGCCGTCCCACCGCGGTGAACCCGGACCTGCGGCTGCGCTCCATCGCGCGCGCCTACA ACTGGCCCATCCTCGACCTCAAGTAA
Upstream 100 bases:
>100_bases CTGGCTGTAGCCCCTTCTCCCCCGAGCCGCCGGGAGGCACGCCAAACTCCCGGCATCATTGACCTCCCCCCCCTCGAAGT GTCAGGAAGCCCGCAGCCCC
Downstream 100 bases:
>100_bases GAGCCCCCACGCCATGCGCCCGTTCAAGACGCTCCAGAAGCTGTACGACGAGGAAAGCCAGGTCGTCATCACCGAGAAGG GCAGCCCCCCGCGCGTGCTG
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MSSKAAFFDVDGTLVKTNVVHVYAYYAMNRGSVLGIAGRTLSTALSVPLFGVMDAVDRKTFNEFFYRYYAGLSEDRLVTI AEDMFEDVLQPALFEQTQDLIDQARRSGCKIVLVTGALDFTMRPLARHLGADDMIANKMQFVGGKATGKVIPPIIEGANK ANAIRAYCTKEGLSLDKCHGYSDSASDYAMLAVVGRPTAVNPDLRLRSIARAYNWPILDLK
Sequences:
>Translated_221_residues MSSKAAFFDVDGTLVKTNVVHVYAYYAMNRGSVLGIAGRTLSTALSVPLFGVMDAVDRKTFNEFFYRYYAGLSEDRLVTI AEDMFEDVLQPALFEQTQDLIDQARRSGCKIVLVTGALDFTMRPLARHLGADDMIANKMQFVGGKATGKVIPPIIEGANK ANAIRAYCTKEGLSLDKCHGYSDSASDYAMLAVVGRPTAVNPDLRLRSIARAYNWPILDLK >Mature_220_residues SSKAAFFDVDGTLVKTNVVHVYAYYAMNRGSVLGIAGRTLSTALSVPLFGVMDAVDRKTFNEFFYRYYAGLSEDRLVTIA EDMFEDVLQPALFEQTQDLIDQARRSGCKIVLVTGALDFTMRPLARHLGADDMIANKMQFVGGKATGKVIPPIIEGANKA NAIRAYCTKEGLSLDKCHGYSDSASDYAMLAVVGRPTAVNPDLRLRSIARAYNWPILDLK
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR006385 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 24290; Mature: 24159
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSKAAFFDVDGTLVKTNVVHVYAYYAMNRGSVLGIAGRTLSTALSVPLFGVMDAVDRKT CCCCCEEEECCCEEEEHHHEEEEEEEEECCCCEEEECCCHHHHHHHCHHHHHHHHHHHHH FNEFFYRYYAGLSEDRLVTIAEDMFEDVLQPALFEQTQDLIDQARRSGCKIVLVTGALDF HHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHH TMRPLARHLGADDMIANKMQFVGGKATGKVIPPIIEGANKANAIRAYCTKEGLSLDKCHG HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCHHHCCC YSDSASDYAMLAVVGRPTAVNPDLRLRSIARAYNWPILDLK CCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEECC >Mature Secondary Structure SSKAAFFDVDGTLVKTNVVHVYAYYAMNRGSVLGIAGRTLSTALSVPLFGVMDAVDRKT CCCCEEEECCCEEEEHHHEEEEEEEEECCCCEEEECCCHHHHHHHCHHHHHHHHHHHHH FNEFFYRYYAGLSEDRLVTIAEDMFEDVLQPALFEQTQDLIDQARRSGCKIVLVTGALDF HHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHH TMRPLARHLGADDMIANKMQFVGGKATGKVIPPIIEGANKANAIRAYCTKEGLSLDKCHG HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCHHHCCC YSDSASDYAMLAVVGRPTAVNPDLRLRSIARAYNWPILDLK CCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]