| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108760600
Identifier: 108760600
GI number: 108760600
Start: 2168714
End: 2169997
Strand: Reverse
Name: 108760600
Synonym: MXAN_1845
Alternate gene names: NA
Gene position: 2169997-2168714 (Counterclockwise)
Preceding gene: 108761747
Following gene: 108760240
Centisome position: 23.74
GC content: 69.24
Gene sequence:
>1284_bases ATGACGCGGCCCCTCGACAGGAGCGCGCCTGGCGTGCGCCTCACGCTGCTGGCACACGAGAAGGCCCGCGGCGGCGAGCC CCTCTCTCTTGAGGGCCGAGTCCTCGGCCTCACCTTCGAGGACTCCGCGACGAAGGCCGACAAGCTGTCCCTCCAGTTGG ACAACTTCGACTTGTCCCTCTTCGACCGAGCTGAGCTCGTGGGCGGCGCGGTGCTGGAGGTGTCCTGGGGCTACCCGGGG CTCATGGCGCCGCCTCGGCGGGTGGTGGTGAAGAGGCTGAAGGGCTTTCAGGTGCTGACCATCGAGGGCCAGGCGCTCAG CGTCCTCATGCACCGCGAAGCGAAGACGCGCACCTGGAAGGGCAAGACGCGCGCCCAGGTGGTGCGTGAGGTGGCCGCCG AGTACGGCTATGAGGAGGACTCCATCCACGTCGAGGACACCGGAGAGTCCTTCGACACCATCCACCAGGCCGGGGAGACG GACGCGAGGCTCCTCCGGCGCCTGGCCGCGCGGGAGGAGTTCGAGTTCCACGTCGACGATAGGGGCCTCACCTTCGGCCC GCGCAACCAGGCCGCCGCGCCCACCCAGGTGCTGTGGTGGTACGCCGACGCGGGCCGCGGCGACATCCTCTCCGTCAACG TCGAGTCGGAGCTGGGCCGTCGAGTGGGCCAGGTGGGCGTCCGTGGCCGGGACGCCATGGCCAAGGCAACCATCGAAGTC CAGGCGAGCAGTGCCACCGTGGAGCGCACCACCCTCGCGGACTTTCTCGAGGTGGTGGAGAAGCGCACGGGCACCACGTC GCTGCAGCTCCGCAACAGCACCACCAACGTCCAGCCCACCTCGGCATCGACACCTGCCCAAGCCCAGCGCGAGTCCGAGG CCCGCTTCCGACGCGCGGAAGCCGGCACGGTGAAGCTGTCCCTCCAGGTGGTGGGCAATCCCAGCTTGCGCGCGAAGTCC GTCGTGGAGGTGCGCGGCATCTCCAGCTTCCTGTCCGGCCGGTACTACGTCACCGAGGCGAAGCACGTCCTCTCCTCCTC CGGCTACACCACGGACTTGAAGCTGTCGCGCGACGGCACCGGCCGCCGGCAGCAAGCCAGCCCCGAGAAGCAGGGCCAGC CCCAGGGCGGACAGCCCAACACCAGTGCGCCCGAGACGACTGGGGCGCTGAAGGAAGTGGAGGCATTCGAGAGGGACACC GGCACCCGGTACATCGAGTACCGCCGTGACGGGCAGCCCATCGGTGTCGAGGACCCCGAAGCCGGAATGAGTCTCCCCAG GTAG
Upstream 100 bases:
>100_bases ACGCGACGCTGGAGCTGGAGGCTGGGCGGCGCCTCTTCATCCCCTCGCTGCGCGTCCTCACCGACGTCATCCTCAGCGAG CAGCGGCGGAGGGCCAGCGA
Downstream 100 bases:
>100_bases CGAGCCCACCATGAGCAGCTTCGACGACGACCTCCTCGCCCACGACACGCGCCTGCTCGGCATGTACGTGGGCTACGTCA CCCAGCGCGAGGACGAGGCG
Product: putative phage late control gene D protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MTRPLDRSAPGVRLTLLAHEKARGGEPLSLEGRVLGLTFEDSATKADKLSLQLDNFDLSLFDRAELVGGAVLEVSWGYPG LMAPPRRVVVKRLKGFQVLTIEGQALSVLMHREAKTRTWKGKTRAQVVREVAAEYGYEEDSIHVEDTGESFDTIHQAGET DARLLRRLAAREEFEFHVDDRGLTFGPRNQAAAPTQVLWWYADAGRGDILSVNVESELGRRVGQVGVRGRDAMAKATIEV QASSATVERTTLADFLEVVEKRTGTTSLQLRNSTTNVQPTSASTPAQAQRESEARFRRAEAGTVKLSLQVVGNPSLRAKS VVEVRGISSFLSGRYYVTEAKHVLSSSGYTTDLKLSRDGTGRRQQASPEKQGQPQGGQPNTSAPETTGALKEVEAFERDT GTRYIEYRRDGQPIGVEDPEAGMSLPR
Sequences:
>Translated_427_residues MTRPLDRSAPGVRLTLLAHEKARGGEPLSLEGRVLGLTFEDSATKADKLSLQLDNFDLSLFDRAELVGGAVLEVSWGYPG LMAPPRRVVVKRLKGFQVLTIEGQALSVLMHREAKTRTWKGKTRAQVVREVAAEYGYEEDSIHVEDTGESFDTIHQAGET DARLLRRLAAREEFEFHVDDRGLTFGPRNQAAAPTQVLWWYADAGRGDILSVNVESELGRRVGQVGVRGRDAMAKATIEV QASSATVERTTLADFLEVVEKRTGTTSLQLRNSTTNVQPTSASTPAQAQRESEARFRRAEAGTVKLSLQVVGNPSLRAKS VVEVRGISSFLSGRYYVTEAKHVLSSSGYTTDLKLSRDGTGRRQQASPEKQGQPQGGQPNTSAPETTGALKEVEAFERDT GTRYIEYRRDGQPIGVEDPEAGMSLPR >Mature_426_residues TRPLDRSAPGVRLTLLAHEKARGGEPLSLEGRVLGLTFEDSATKADKLSLQLDNFDLSLFDRAELVGGAVLEVSWGYPGL MAPPRRVVVKRLKGFQVLTIEGQALSVLMHREAKTRTWKGKTRAQVVREVAAEYGYEEDSIHVEDTGESFDTIHQAGETD ARLLRRLAAREEFEFHVDDRGLTFGPRNQAAAPTQVLWWYADAGRGDILSVNVESELGRRVGQVGVRGRDAMAKATIEVQ ASSATVERTTLADFLEVVEKRTGTTSLQLRNSTTNVQPTSASTPAQAQRESEARFRRAEAGTVKLSLQVVGNPSLRAKSV VEVRGISSFLSGRYYVTEAKHVLSSSGYTTDLKLSRDGTGRRQQASPEKQGQPQGGQPNTSAPETTGALKEVEAFERDTG TRYIEYRRDGQPIGVEDPEAGMSLPR
Specific function: Unknown
COG id: COG3500
COG function: function code R; Phage protein D
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46796; Mature: 46665
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPLDRSAPGVRLTLLAHEKARGGEPLSLEGRVLGLTFEDSATKADKLSLQLDNFDLSL CCCCCCCCCCCEEEEEEEECCCCCCCCEEECCEEEEEEECCCCCCCEEEEEEECCCCEEH FDRAELVGGAVLEVSWGYPGLMAPPRRVVVKRLKGFQVLTIEGQALSVLMHREAKTRTWK HHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEECCCEEEEEHHCCCCCCCCC GKTRAQVVREVAAEYGYEEDSIHVEDTGESFDTIHQAGETDARLLRRLAAREEFEFHVDD CCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHCCCHHHHHHHHHHHCCCCEEEECC RGLTFGPRNQAAAPTQVLWWYADAGRGDILSVNVESELGRRVGQVGVRGRDAMAKATIEV CCCEECCCCCCCCCCEEEEEEECCCCCCEEEEECHHHHHHHHHHCCCCCCCCCEEEEEEE QASSATVERTTLADFLEVVEKRTGTTSLQLRNSTTNVQPTSASTPAQAQRESEARFRRAE EECCCEEHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCC AGTVKLSLQVVGNPSLRAKSVVEVRGISSFLSGRYYVTEAKHVLSSSGYTTDLKLSRDGT CCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHCCCCEEEEEEECCCC GRRQQASPEKQGQPQGGQPNTSAPETTGALKEVEAFERDTGTRYIEYRRDGQPIGVEDPE CCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC AGMSLPR CCCCCCC >Mature Secondary Structure TRPLDRSAPGVRLTLLAHEKARGGEPLSLEGRVLGLTFEDSATKADKLSLQLDNFDLSL CCCCCCCCCCEEEEEEEECCCCCCCCEEECCEEEEEEECCCCCCCEEEEEEECCCCEEH FDRAELVGGAVLEVSWGYPGLMAPPRRVVVKRLKGFQVLTIEGQALSVLMHREAKTRTWK HHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEECCCEEEEEHHCCCCCCCCC GKTRAQVVREVAAEYGYEEDSIHVEDTGESFDTIHQAGETDARLLRRLAAREEFEFHVDD CCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHCCCHHHHHHHHHHHCCCCEEEECC RGLTFGPRNQAAAPTQVLWWYADAGRGDILSVNVESELGRRVGQVGVRGRDAMAKATIEV CCCEECCCCCCCCCCEEEEEEECCCCCCEEEEECHHHHHHHHHHCCCCCCCCCEEEEEEE QASSATVERTTLADFLEVVEKRTGTTSLQLRNSTTNVQPTSASTPAQAQRESEARFRRAE EECCCEEHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCC AGTVKLSLQVVGNPSLRAKSVVEVRGISSFLSGRYYVTEAKHVLSSSGYTTDLKLSRDGT CCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHCCCCEEEEEEECCCC GRRQQASPEKQGQPQGGQPNTSAPETTGALKEVEAFERDTGTRYIEYRRDGQPIGVEDPE CCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC AGMSLPR CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA