| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108760573
Identifier: 108760573
GI number: 108760573
Start: 6735718
End: 6737577
Strand: Reverse
Name: 108760573
Synonym: MXAN_5412
Alternate gene names: NA
Gene position: 6737577-6735718 (Counterclockwise)
Preceding gene: 108763443
Following gene: 108763606
Centisome position: 73.72
GC content: 67.53
Gene sequence:
>1860_bases GTGTCGACACGTCCTATGTCCTCCCAGAAATCTCCCGGTTTTCTCCGCAGCTATGTGCTGCCGGCTCTTTGGCTTTTCGC CCTGCCGCTGTTCGGTGTCTGGTTCTCCGGCCATGCCATGGGCCGCTTCGACACACAGGTCCTCGCGGCCGTCGAGCAGC AGATTGGACGCGACACCGCGGTCAGCGAAGCGGACCGTCAGGCGGCGCTCGACTTCTACCGCGCGGTGCCCGCGTCCATG GCCTGCCTGAGCGGTGACCCGGAGCTGGCGAGTTACCGCAACAGCCTGGGAAAGGCGTGCGCGGACCTGAACCAGTTCAA TTGGGCGTCCCTGGCATCCTGGGGGTTGTTGGCGCTAGGCCTTGCCTCCACCGTGGTCGCGCTTCTCTGTGGTCTGGCCG CGTTCGTCTCGCGTCCCTTTCAGTTCGGCAGCTTCGTGGTGGGCTGGCTCGTGCTCCGCGTCACCAGTGCGATTCAGGTG CTGGGACAGGGCGCGCTGCTCGTGTGGCTCTCCTATTGGATGACGGCGCTATGGATGGAGCGCTACTACCCGAAGCTCAT CGGCATCATGGCCCTTCTGGCCGGCGGCGCGGTGTTCCTGGTGGTGGTGGCCATCTTCCGCCGTCCGCCCTCGGACTTCG ACGTGGAGGCCGAGGCAATCACCGAGGCTCGCGCCCCGGAGCTGTGGGCTTGCGTGCGGCGCCTCTGCGAGCGGCTCCAG ACGGCGCCCCCCGACAACATCCTCGCTGGCATCGATGCCAACTTCTTCGTGACCGAGCACGAGGTGCGCGTGGGTGAGCG CACGCTGACCGGCCGCACGCTCTTCGTGAGCCTGTCACTGCTGCGCCTGCTGGAGCGCTCCGAGGCGGAGGCGGTGCTGG CGCACGAGATGGGGCACTTGCTGGGCGGCGACACGGGGCACAGCAAGCGGCTGGCGCCCAAGCTCGCGCACTTCGGCCAT TACCTGCAGCAGCTCTACGACGGTGGCATGACGCGGCCCGTCTTCTATTTCATGATGGCCTACCGCGGCCTGTTCGAGCT GTCGCTGGGCCGCAGCCGGCGCGCCAGCGAACTCGCGGCGGACCGGTTGGCGGCGGGGGTGACCTCGGGGCAGGACATCG CCCGTTCGCTGGTGAAGGTGGGCGCGTACGCGAGCTTCCGCGACCGTGTGGAGGCGAAGCTCTTCGCCCAGGACGAGCAG CACCAGACGGTGGCCATCGCGGACCGGGTGGCGCACGGCTTCTCCGCGTATGCCCAGTCGGACACCGTGCATGATGACCT GCAGGGGGCCGTGACGCCGCATCCCTTCGACTCCCACCCGCCGTTGGCCGCGCGCATGGAGAACGTGGGGGCCCACCTCA ATCCCGAGGACATGGTGCGGTTGCTGCTGGAGCCGGTGACGTCGTCGTGGGCGGACACCGTTCAGGACGCGGACGCCATC GAGGCGCGGCTGTGGGGCGCCTATGAGGCGCGTTTCGCTCAGGCCCATGACCTGTCCCTCGCGTACCGCTATGAGCCCTC CACGGAGGAGGAGCGAGCGCATGTGGAGAAGCACTTCCCGCCGCTCGTGTTCGAGGGCAAGGAGGCGGGCTTCGATGTCC AGATGGACTACGCGCAGGTGAGCTACGGGGACTGGGAGGCGCCCATCCTGTTCGAGCAGATCGCCTCGGCCACCACCGCG GACCGCATGTTCAAGAAGTACCTGGACCTGGAAGTCCCCGGGGAAGGGCGCTTCAAGAGCCGCCGCTCCATCTGCCTGAG CAAGCTGAGAGAGCCGGACGCCTTGCTGCAGGCTTTCGAGCGCTACCTGTCGCGGCACCGCATCATGAAGGAGCACCTCG CAGGCGCGCAGGCTGCTTGA
Upstream 100 bases:
>100_bases CTGGATTGCTGAGGCACCAGGTGGGTCGTCGTCAGTCCGCGAGTACCGGCATGTGGGCCTTCATCCAGGGGCGCGACGCT CACGCGGGGTGCGCTAGAAT
Downstream 100 bases:
>100_bases GGCAGACGTGGGCTGCGCGCGATGGGGCTTCCGTTCGGGGCGCCCCATCGCCTGCGTGCCGGCACGGCGCAGCGGCGATG CCCGATGCGACCGTGCGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Oligopeptide ABC Transporter
Number of amino acids: Translated: 619; Mature: 618
Protein sequence:
>619_residues MSTRPMSSQKSPGFLRSYVLPALWLFALPLFGVWFSGHAMGRFDTQVLAAVEQQIGRDTAVSEADRQAALDFYRAVPASM ACLSGDPELASYRNSLGKACADLNQFNWASLASWGLLALGLASTVVALLCGLAAFVSRPFQFGSFVVGWLVLRVTSAIQV LGQGALLVWLSYWMTALWMERYYPKLIGIMALLAGGAVFLVVVAIFRRPPSDFDVEAEAITEARAPELWACVRRLCERLQ TAPPDNILAGIDANFFVTEHEVRVGERTLTGRTLFVSLSLLRLLERSEAEAVLAHEMGHLLGGDTGHSKRLAPKLAHFGH YLQQLYDGGMTRPVFYFMMAYRGLFELSLGRSRRASELAADRLAAGVTSGQDIARSLVKVGAYASFRDRVEAKLFAQDEQ HQTVAIADRVAHGFSAYAQSDTVHDDLQGAVTPHPFDSHPPLAARMENVGAHLNPEDMVRLLLEPVTSSWADTVQDADAI EARLWGAYEARFAQAHDLSLAYRYEPSTEEERAHVEKHFPPLVFEGKEAGFDVQMDYAQVSYGDWEAPILFEQIASATTA DRMFKKYLDLEVPGEGRFKSRRSICLSKLREPDALLQAFERYLSRHRIMKEHLAGAQAA
Sequences:
>Translated_619_residues MSTRPMSSQKSPGFLRSYVLPALWLFALPLFGVWFSGHAMGRFDTQVLAAVEQQIGRDTAVSEADRQAALDFYRAVPASM ACLSGDPELASYRNSLGKACADLNQFNWASLASWGLLALGLASTVVALLCGLAAFVSRPFQFGSFVVGWLVLRVTSAIQV LGQGALLVWLSYWMTALWMERYYPKLIGIMALLAGGAVFLVVVAIFRRPPSDFDVEAEAITEARAPELWACVRRLCERLQ TAPPDNILAGIDANFFVTEHEVRVGERTLTGRTLFVSLSLLRLLERSEAEAVLAHEMGHLLGGDTGHSKRLAPKLAHFGH YLQQLYDGGMTRPVFYFMMAYRGLFELSLGRSRRASELAADRLAAGVTSGQDIARSLVKVGAYASFRDRVEAKLFAQDEQ HQTVAIADRVAHGFSAYAQSDTVHDDLQGAVTPHPFDSHPPLAARMENVGAHLNPEDMVRLLLEPVTSSWADTVQDADAI EARLWGAYEARFAQAHDLSLAYRYEPSTEEERAHVEKHFPPLVFEGKEAGFDVQMDYAQVSYGDWEAPILFEQIASATTA DRMFKKYLDLEVPGEGRFKSRRSICLSKLREPDALLQAFERYLSRHRIMKEHLAGAQAA >Mature_618_residues STRPMSSQKSPGFLRSYVLPALWLFALPLFGVWFSGHAMGRFDTQVLAAVEQQIGRDTAVSEADRQAALDFYRAVPASMA CLSGDPELASYRNSLGKACADLNQFNWASLASWGLLALGLASTVVALLCGLAAFVSRPFQFGSFVVGWLVLRVTSAIQVL GQGALLVWLSYWMTALWMERYYPKLIGIMALLAGGAVFLVVVAIFRRPPSDFDVEAEAITEARAPELWACVRRLCERLQT APPDNILAGIDANFFVTEHEVRVGERTLTGRTLFVSLSLLRLLERSEAEAVLAHEMGHLLGGDTGHSKRLAPKLAHFGHY LQQLYDGGMTRPVFYFMMAYRGLFELSLGRSRRASELAADRLAAGVTSGQDIARSLVKVGAYASFRDRVEAKLFAQDEQH QTVAIADRVAHGFSAYAQSDTVHDDLQGAVTPHPFDSHPPLAARMENVGAHLNPEDMVRLLLEPVTSSWADTVQDADAIE ARLWGAYEARFAQAHDLSLAYRYEPSTEEERAHVEKHFPPLVFEGKEAGFDVQMDYAQVSYGDWEAPILFEQIASATTAD RMFKKYLDLEVPGEGRFKSRRSICLSKLREPDALLQAFERYLSRHRIMKEHLAGAQAA
Specific function: Unknown
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68614; Mature: 68483
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRPMSSQKSPGFLRSYVLPALWLFALPLFGVWFSGHAMGRFDTQVLAAVEQQIGRDTA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHH VSEADRQAALDFYRAVPASMACLSGDPELASYRNSLGKACADLNQFNWASLASWGLLALG HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LASTVVALLCGLAAFVSRPFQFGSFVVGWLVLRVTSAIQVLGQGALLVWLSYWMTALWME HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH RYYPKLIGIMALLAGGAVFLVVVAIFRRPPSDFDVEAEAITEARAPELWACVRRLCERLQ HHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHH TAPPDNILAGIDANFFVTEHEVRVGERTLTGRTLFVSLSLLRLLERSEAEAVLAHEMGHL CCCCCCEEECCCCCEEEEHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGGDTGHSKRLAPKLAHFGHYLQQLYDGGMTRPVFYFMMAYRGLFELSLGRSRRASELAA HCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH DRLAAGVTSGQDIARSLVKVGAYASFRDRVEAKLFAQDEQHQTVAIADRVAHGFSAYAQS HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC DTVHDDLQGAVTPHPFDSHPPLAARMENVGAHLNPEDMVRLLLEPVTSSWADTVQDADAI CCCHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EARLWGAYEARFAQAHDLSLAYRYEPSTEEERAHVEKHFPPLVFEGKEAGFDVQMDYAQV HHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHCCCCCEECCCCCCCCEEECHHHC SYGDWEAPILFEQIASATTADRMFKKYLDLEVPGEGRFKSRRSICLSKLREPDALLQAFE CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHH RYLSRHRIMKEHLAGAQAA HHHHHHHHHHHHHCCCCCC >Mature Secondary Structure STRPMSSQKSPGFLRSYVLPALWLFALPLFGVWFSGHAMGRFDTQVLAAVEQQIGRDTA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHH VSEADRQAALDFYRAVPASMACLSGDPELASYRNSLGKACADLNQFNWASLASWGLLALG HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LASTVVALLCGLAAFVSRPFQFGSFVVGWLVLRVTSAIQVLGQGALLVWLSYWMTALWME HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH RYYPKLIGIMALLAGGAVFLVVVAIFRRPPSDFDVEAEAITEARAPELWACVRRLCERLQ HHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHH TAPPDNILAGIDANFFVTEHEVRVGERTLTGRTLFVSLSLLRLLERSEAEAVLAHEMGHL CCCCCCEEECCCCCEEEEHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGGDTGHSKRLAPKLAHFGHYLQQLYDGGMTRPVFYFMMAYRGLFELSLGRSRRASELAA HCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH DRLAAGVTSGQDIARSLVKVGAYASFRDRVEAKLFAQDEQHQTVAIADRVAHGFSAYAQS HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC DTVHDDLQGAVTPHPFDSHPPLAARMENVGAHLNPEDMVRLLLEPVTSSWADTVQDADAI CCCHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EARLWGAYEARFAQAHDLSLAYRYEPSTEEERAHVEKHFPPLVFEGKEAGFDVQMDYAQV HHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHCCCCCEECCCCCCCCEEECHHHC SYGDWEAPILFEQIASATTADRMFKKYLDLEVPGEGRFKSRRSICLSKLREPDALLQAFE CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHH RYLSRHRIMKEHLAGAQAA HHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA