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The map label for this gene is sufD [C]

Identifier: 108760528

GI number: 108760528

Start: 1345985

End: 1347325

Strand: Direct

Name: sufD [C]

Synonym: MXAN_1155

Alternate gene names: 108760528

Gene position: 1345985-1347325 (Clockwise)

Preceding gene: 108761954

Following gene: 108764069

Centisome position: 14.73

GC content: 72.33

Gene sequence:

>1341_bases
ATGACGACGGCCCTGGCGCACTACCTGGATGTGGCCACGCGCTTCCAGGCGGCGCCCGAACAGGCGTCCGCGCCGCAGTG
GCTCAAGCGCCTGCGCGCAGATGCCCTGGCCCACTTCGAGCGGCAGGGCCTGCCCACGACGCGTGACGAGGCGTGGAAGT
ACTCCCGGCTGGGGGCCATCGCGGAAGGAACGTTCATTCCACGGACGGATGTGTCCCGGGACACCGCCCACCTGTCGGCG
GTGGTGGAGCGGCTGGGCTTGCCGGGGCCCCGGTTGGTGTTCGTGGATGGGCGGCTGGCGCCGGAGCTGTCGTCCGTGGC
GGGCCTGCCGCGCGGACTGACGCTGAAGCCGCTGCGGGACGCGGTGCGTGAGGACGGCGAGCTGCTGGAGTCCGTGCTGG
GGCAGCGGGCCCTGGCGAACGAGCACGCCTTCACCGCGCTCAACGCGGCGCTGCTGGAAGAGGGCGTGCTGTTGCGGCTG
GCACCGGGCGCGCTGAGCGAGGTGCCCGTGCAGGTGGTGTTCCTCACGCGCGGCGACGCGCCGGTGCTGTCCAGCCCGCG
CATCCTCGTGGTGGCGGGGGAGAGCAGCGAAGCGACGCTGGTGGAGACGTATGCCAGCGCGGGCCCCGCGGGCTCGGCGG
CGACATTCACCAACGCGGTGACGGAGGTGACGCTGGGCGACAACGCCAGCCTCCACCACTACAAGCTCCAGGTGGAGGCG
GACGCGGCGCTGCACGTGGGCGCGCTCCATGCACGGCAGGGGCGGGACAGCCGCTTCGCCTCGCATGCCTTCGCCTTCGG
TGGGGCCATGGCGCGCAACGAGGTCCACGCGGCCTTCGCGGGCGAGGGTGGCGACGCGACATTGAATGGCCTGTACGTGG
GGCAGGGCGCGCAGCACCTGGACAACCGCACGGCGCTGGACCACGCGGTGCCCCGGTGCACCAGCCGCGAACTGTACAAG
GGCGTGCTGGATGGTCACTCACGCGGCACCTTCCACGGGCTCATCCGCGTGCGGCAGGACGCGCAGCGCACGGACTCGCG
GCAGCAGAACCGCAACCTGCTGCTGTCGGAGTCGGCGCAGGCGGATGCACGGCCTCAGTTGGAAATCTTCGCGGACGACG
TGAAGTGCGCGCACGGCGCGGCGGTGGGGCGGCTGGACGCGCAGGCGCTGTTCTACCTGCGCTCGCGCGGCGTGCCCCAG
GCAGAGGCGGAGCGGCTGCTCACCTACGCCTTCGCTCGCGAGGTGGTGGAGGCGGTGCCCGCCGGCCCTGTGCGCGCGAA
CATCGAAGCGCTCCTGGCCTTGAAGCTGCCAGGCGCGGCGCAGCGCGAGGTGACGGCATGA

Upstream 100 bases:

>100_bases
CCGGTGGGCGCGAGCTGGCGCTGGAGCTGGAGGAGAAGGGCTACGGCTGGCTGGGGTTGGACGGTGGAAAGGCCAAGGCG
CCGGTGGCGGAGGCGCGGCG

Downstream 100 bases:

>100_bases
GCGGCTTCGACGTGAATCAGGTCCGTAAGGACTTCCCCATCCTCGACCAGGAGGTGCGGGGCCGGCCGCTGGTGTACCTG
GACAGCGCCGCCACGGCGCA

Product: FeS assembly protein SufD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 445

Protein sequence:

>446_residues
MTTALAHYLDVATRFQAAPEQASAPQWLKRLRADALAHFERQGLPTTRDEAWKYSRLGAIAEGTFIPRTDVSRDTAHLSA
VVERLGLPGPRLVFVDGRLAPELSSVAGLPRGLTLKPLRDAVREDGELLESVLGQRALANEHAFTALNAALLEEGVLLRL
APGALSEVPVQVVFLTRGDAPVLSSPRILVVAGESSEATLVETYASAGPAGSAATFTNAVTEVTLGDNASLHHYKLQVEA
DAALHVGALHARQGRDSRFASHAFAFGGAMARNEVHAAFAGEGGDATLNGLYVGQGAQHLDNRTALDHAVPRCTSRELYK
GVLDGHSRGTFHGLIRVRQDAQRTDSRQQNRNLLLSESAQADARPQLEIFADDVKCAHGAAVGRLDAQALFYLRSRGVPQ
AEAERLLTYAFAREVVEAVPAGPVRANIEALLALKLPGAAQREVTA

Sequences:

>Translated_446_residues
MTTALAHYLDVATRFQAAPEQASAPQWLKRLRADALAHFERQGLPTTRDEAWKYSRLGAIAEGTFIPRTDVSRDTAHLSA
VVERLGLPGPRLVFVDGRLAPELSSVAGLPRGLTLKPLRDAVREDGELLESVLGQRALANEHAFTALNAALLEEGVLLRL
APGALSEVPVQVVFLTRGDAPVLSSPRILVVAGESSEATLVETYASAGPAGSAATFTNAVTEVTLGDNASLHHYKLQVEA
DAALHVGALHARQGRDSRFASHAFAFGGAMARNEVHAAFAGEGGDATLNGLYVGQGAQHLDNRTALDHAVPRCTSRELYK
GVLDGHSRGTFHGLIRVRQDAQRTDSRQQNRNLLLSESAQADARPQLEIFADDVKCAHGAAVGRLDAQALFYLRSRGVPQ
AEAERLLTYAFAREVVEAVPAGPVRANIEALLALKLPGAAQREVTA
>Mature_445_residues
TTALAHYLDVATRFQAAPEQASAPQWLKRLRADALAHFERQGLPTTRDEAWKYSRLGAIAEGTFIPRTDVSRDTAHLSAV
VERLGLPGPRLVFVDGRLAPELSSVAGLPRGLTLKPLRDAVREDGELLESVLGQRALANEHAFTALNAALLEEGVLLRLA
PGALSEVPVQVVFLTRGDAPVLSSPRILVVAGESSEATLVETYASAGPAGSAATFTNAVTEVTLGDNASLHHYKLQVEAD
AALHVGALHARQGRDSRFASHAFAFGGAMARNEVHAAFAGEGGDATLNGLYVGQGAQHLDNRTALDHAVPRCTSRELYKG
VLDGHSRGTFHGLIRVRQDAQRTDSRQQNRNLLLSESAQADARPQLEIFADDVKCAHGAAVGRLDAQALFYLRSRGVPQA
EAERLLTYAFAREVVEAVPAGPVRANIEALLALKLPGAAQREVTA

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=404, Percent_Identity=32.4257425742574, Blast_Score=197, Evalue=2e-51,
Organism=Escherichia coli, GI87081955, Length=318, Percent_Identity=21.6981132075472, Blast_Score=89, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 47625; Mature: 47494

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTALAHYLDVATRFQAAPEQASAPQWLKRLRADALAHFERQGLPTTRDEAWKYSRLGAI
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCH
AEGTFIPRTDVSRDTAHLSAVVERLGLPGPRLVFVDGRLAPELSSVAGLPRGLTLKPLRD
HCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHCCCCCCCCHHHHHH
AVREDGELLESVLGQRALANEHAFTALNAALLEEGVLLRLAPGALSEVPVQVVFLTRGDA
HHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEECCCC
PVLSSPRILVVAGESSEATLVETYASAGPAGSAATFTNAVTEVTLGDNASLHHYKLQVEA
CCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCHHHHHHHEEEEECCCCCEEEEEEEEEC
DAALHVGALHARQGRDSRFASHAFAFGGAMARNEVHAAFAGEGGDATLNGLYVGQGAQHL
CCCEEHHHHHHCCCCCHHHHHHHHHHCCHHHHCCEEEEECCCCCCCEEEEEEECCCHHHH
DNRTALDHAVPRCTSRELYKGVLDGHSRGTFHGLIRVRQDAQRTDSRQQNRNLLLSESAQ
CCHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC
ADARPQLEIFADDVKCAHGAAVGRLDAQALFYLRSRGVPQAEAERLLTYAFAREVVEAVP
CCCCCCEEEEECCHHHHCCCHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
AGPVRANIEALLALKLPGAAQREVTA
CCCCHHCCEEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
TTALAHYLDVATRFQAAPEQASAPQWLKRLRADALAHFERQGLPTTRDEAWKYSRLGAI
CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCH
AEGTFIPRTDVSRDTAHLSAVVERLGLPGPRLVFVDGRLAPELSSVAGLPRGLTLKPLRD
HCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHCCCCCCCCHHHHHH
AVREDGELLESVLGQRALANEHAFTALNAALLEEGVLLRLAPGALSEVPVQVVFLTRGDA
HHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEECCCC
PVLSSPRILVVAGESSEATLVETYASAGPAGSAATFTNAVTEVTLGDNASLHHYKLQVEA
CCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCHHHHHHHEEEEECCCCCEEEEEEEEEC
DAALHVGALHARQGRDSRFASHAFAFGGAMARNEVHAAFAGEGGDATLNGLYVGQGAQHL
CCCEEHHHHHHCCCCCHHHHHHHHHHCCHHHHCCEEEEECCCCCCCEEEEEEECCCHHHH
DNRTALDHAVPRCTSRELYKGVLDGHSRGTFHGLIRVRQDAQRTDSRQQNRNLLLSESAQ
CCHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC
ADARPQLEIFADDVKCAHGAAVGRLDAQALFYLRSRGVPQAEAERLLTYAFAREVVEAVP
CCCCCCEEEEECCHHHHCCCHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
AGPVRANIEALLALKLPGAAQREVTA
CCCCHHCCEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]