| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is nadD
Identifier: 108760508
GI number: 108760508
Start: 5140308
End: 5140880
Strand: Reverse
Name: nadD
Synonym: MXAN_4185
Alternate gene names: 108760508
Gene position: 5140880-5140308 (Counterclockwise)
Preceding gene: 108763313
Following gene: 108760905
Centisome position: 56.25
GC content: 68.41
Gene sequence:
>573_bases GTGAGGCCCGCCGTGCAGGTCGCGCTCCTCGGAGGCTCGTTCAACCCGCCCCATGTGGGGCACCTCATGGCCGCCACGTA CGTCCATGCTACCCAGGACGTGGACGAGGTGTGGCTGATGCCGTCCTGGCAGCACCCGTTCGGCAAGCAGATGGAGCCCT TCGAGCATCGCGTCGCCATGTGTGATGCGCTGTGCGCGGAGACATCGGGCTGGCTGAAGACAAGCCGGATCGAGCAGGAG CCGGGACTCTCCGGCCGCACGGTGGACACGCTGACCCTGCTGGTGGCGCGGCATCCGGACATCCGCTGGTCGATCATCAT CGGCAGCGACATCCTGCGCGACCTTCCGCATTGGAAGGACTTCCACCGCATCGAGGAGCTGTCGCGGGTGATGGTGCTCA ACCGCGCGGGGTACCCGGCGCCGAACACATTGGGGCCGCCGCTGGCGGAGGTGTCGTCGACGCTGATTCGCGACCTGCTC GCGCGCGGCGAGGCTCCGTCGGACCTGGTGCCCGCGCGCGCCATTGCCTATGCGCGCGAGCACGGTCTCTATGGCCTGAA GCGGACGCCGTAG
Upstream 100 bases:
>100_bases AACCTGCGCTTCTCCGCGTTCCGCCTGGATGGGCACTCGATAGTGGAGCCCCAGGTCATCGTCCTGGAGAAGAAGTCCCC GAAGTTGTCCCTCAAGTGAC
Downstream 100 bases:
>100_bases CGCCGCCGTCCCCCGCTAAAGGGCTTCTATTCCGTTGATACCCTTGCGTAAAAACCAGGGCAGTTTGAAACTCGCGATGG CCGTTCTTTCCTGGAGAAAC
Product: nicotinate (nicotinamide) nucleotide adenylyltransferase
Products: NA
Alternate protein names: Deamido-NAD(+) diphosphorylase; Deamido-NAD(+) pyrophosphorylase; Nicotinate mononucleotide adenylyltransferase; NaMN adenylyltransferase
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MRPAVQVALLGGSFNPPHVGHLMAATYVHATQDVDEVWLMPSWQHPFGKQMEPFEHRVAMCDALCAETSGWLKTSRIEQE PGLSGRTVDTLTLLVARHPDIRWSIIIGSDILRDLPHWKDFHRIEELSRVMVLNRAGYPAPNTLGPPLAEVSSTLIRDLL ARGEAPSDLVPARAIAYAREHGLYGLKRTP
Sequences:
>Translated_190_residues MRPAVQVALLGGSFNPPHVGHLMAATYVHATQDVDEVWLMPSWQHPFGKQMEPFEHRVAMCDALCAETSGWLKTSRIEQE PGLSGRTVDTLTLLVARHPDIRWSIIIGSDILRDLPHWKDFHRIEELSRVMVLNRAGYPAPNTLGPPLAEVSSTLIRDLL ARGEAPSDLVPARAIAYAREHGLYGLKRTP >Mature_190_residues MRPAVQVALLGGSFNPPHVGHLMAATYVHATQDVDEVWLMPSWQHPFGKQMEPFEHRVAMCDALCAETSGWLKTSRIEQE PGLSGRTVDTLTLLVARHPDIRWSIIIGSDILRDLPHWKDFHRIEELSRVMVLNRAGYPAPNTLGPPLAEVSSTLIRDLL ARGEAPSDLVPARAIAYAREHGLYGLKRTP
Specific function: Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
COG id: COG1057
COG function: function code H; Nicotinic acid mononucleotide adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nadD family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NADD_MYXXD (Q1D4R3)
Other databases:
- EMBL: CP000113 - RefSeq: YP_632360.1 - ProteinModelPortal: Q1D4R3 - SMR: Q1D4R3 - STRING: Q1D4R3 - GeneID: 4102642 - GenomeReviews: CP000113_GR - KEGG: mxa:MXAN_4185 - TIGR: MXAN_4185 - eggNOG: COG1057 - HOGENOM: HBG739448 - OMA: WAHIDEL - PhylomeDB: Q1D4R3 - ProtClustDB: CLSK946154 - BioCyc: MXAN246197:MXAN_4185-MONOMER - HAMAP: MF_00244 - InterPro: IPR004820 - InterPro: IPR005248 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR12039 - TIGRFAMs: TIGR00482
Pfam domain/function: PF01467 CTP_transf_2
EC number: =2.7.7.18
Molecular weight: Translated: 21169; Mature: 21169
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPAVQVALLGGSFNPPHVGHLMAATYVHATQDVDEVWLMPSWQHPFGKQMEPFEHRVAM CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCHHHHHHHH CDALCAETSGWLKTSRIEQEPGLSGRTVDTLTLLVARHPDIRWSIIIGSDILRDLPHWKD HHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECHHHHHHCCCHHH FHRIEELSRVMVLNRAGYPAPNTLGPPLAEVSSTLIRDLLARGEAPSDLVPARAIAYARE HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH HGLYGLKRTP HCCCCCCCCC >Mature Secondary Structure MRPAVQVALLGGSFNPPHVGHLMAATYVHATQDVDEVWLMPSWQHPFGKQMEPFEHRVAM CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCHHHHHHHH CDALCAETSGWLKTSRIEQEPGLSGRTVDTLTLLVARHPDIRWSIIIGSDILRDLPHWKD HHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECHHHHHHCCCHHH FHRIEELSRVMVLNRAGYPAPNTLGPPLAEVSSTLIRDLLARGEAPSDLVPARAIAYARE HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH HGLYGLKRTP HCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA