| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108760433
Identifier: 108760433
GI number: 108760433
Start: 576282
End: 576887
Strand: Reverse
Name: 108760433
Synonym: MXAN_0516
Alternate gene names: NA
Gene position: 576887-576282 (Counterclockwise)
Preceding gene: 108756862
Following gene: 108758712
Centisome position: 6.31
GC content: 66.34
Gene sequence:
>606_bases ATGAAAGGGGTGGTGATGGGGCAGCAGCCATTCAGACTGACGCTCGGGCAGATGGAGGAGCGGCGACTGTTCGCCGCTTC GCTGCTGAAATCGGGTTGGCGCCCAGTGGACGTAGCGGACGAGTGCGGCGTCACCCGAGGAGCGGTGTCGCAGTGGTGCA AAGCCCTCGCGCAAGGAGGCGTCAGGAGGCTGCGGCGCAAGCCGCATCAGGGCCGGCCCTCACGGCTGAGCTCCTCGGAG TGGAAGCAAGTGGCCCGAGCATTCAAGGCCGGCGCCGTTCGGGCCGTCTTTCCCACGGAGCGATGGACCCTTCCACGCAT CGCACGTCTCATCGAGCAACGCTGGGGCGTGCGGTACCACCCGCGCTCCTTGTCGAGGCCACTGCATCGGCTGGGGTTCT CCGCGCACCGCCCTCGTCCCCAGGCTCGCGAGCGGGATGATGCGCTCATCGAAGCCTGGGGAAGAAGAGACTGGCCTCGC ATCAAAAAGGGGCTCGAAGAAGCAGGAGGACGATTGCCTTCTTGGATGAGACGGGTCACACGTTTCGGGCCCGCCTGGGC ACCACCTGGGCGCCGGTGGGGCAAGTCCGAGTCCTCAAGCGTCTGA
Upstream 100 bases:
>100_bases GTCCCCCACCGCAACATGCGCAAGACACTCGGGGCCTAGCGGACCTACGAGCGCCTAAACCGCCTCGATGAATCCCCTAA ACACCGGAGCGTTTGTTCCG
Downstream 100 bases:
>100_bases GCAGGCGCCGTGAGGTGTCCAGCGTCGTGCTGCTGACGCTGCCCCGCGGGGGCGTGAACGCCCCAAGGTGTTCGCTCGTC ACTTCGTCGGCGCTGTCCAT
Product: IS630 family transposase
Products: NA
Alternate protein names: Transposase IS; Transposase Of IS
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MKGVVMGQQPFRLTLGQMEERRLFAASLLKSGWRPVDVADECGVTRGAVSQWCKALAQGGVRRLRRKPHQGRPSRLSSSE WKQVARAFKAGAVRAVFPTERWTLPRIARLIEQRWGVRYHPRSLSRPLHRLGFSAHRPRPQARERDDALIEAWGRRDWPR IKKGLEEAGGRLPSWMRRVTRFGPAWAPPGRRWGKSESSSV
Sequences:
>Translated_201_residues MKGVVMGQQPFRLTLGQMEERRLFAASLLKSGWRPVDVADECGVTRGAVSQWCKALAQGGVRRLRRKPHQGRPSRLSSSE WKQVARAFKAGAVRAVFPTERWTLPRIARLIEQRWGVRYHPRSLSRPLHRLGFSAHRPRPQARERDDALIEAWGRRDWPR IKKGLEEAGGRLPSWMRRVTRFGPAWAPPGRRWGKSESSSV >Mature_201_residues MKGVVMGQQPFRLTLGQMEERRLFAASLLKSGWRPVDVADECGVTRGAVSQWCKALAQGGVRRLRRKPHQGRPSRLSSSE WKQVARAFKAGAVRAVFPTERWTLPRIARLIEQRWGVRYHPRSLSRPLHRLGFSAHRPRPQARERDDALIEAWGRRDWPR IKKGLEEAGGRLPSWMRRVTRFGPAWAPPGRRWGKSESSSV
Specific function: Unknown
COG id: COG3415
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23074; Mature: 23074
Theoretical pI: Translated: 12.36; Mature: 12.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGVVMGQQPFRLTLGQMEERRLFAASLLKSGWRPVDVADECGVTRGAVSQWCKALAQGG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHHH VRRLRRKPHQGRPSRLSSSEWKQVARAFKAGAVRAVFPTERWTLPRIARLIEQRWGVRYH HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHCCCCCC PRSLSRPLHRLGFSAHRPRPQARERDDALIEAWGRRDWPRIKKGLEEAGGRLPSWMRRVT CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHH RFGPAWAPPGRRWGKSESSSV HHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKGVVMGQQPFRLTLGQMEERRLFAASLLKSGWRPVDVADECGVTRGAVSQWCKALAQGG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHHH VRRLRRKPHQGRPSRLSSSEWKQVARAFKAGAVRAVFPTERWTLPRIARLIEQRWGVRYH HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHCCCCCC PRSLSRPLHRLGFSAHRPRPQARERDDALIEAWGRRDWPRIKKGLEEAGGRLPSWMRRVT CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHH RFGPAWAPPGRRWGKSESSSV HHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA