| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is yfiP [C]
Identifier: 108760402
GI number: 108760402
Start: 6245175
End: 6245759
Strand: Direct
Name: yfiP [C]
Synonym: MXAN_4995
Alternate gene names: 108760402
Gene position: 6245175-6245759 (Clockwise)
Preceding gene: 108757066
Following gene: 108758167
Centisome position: 68.33
GC content: 69.06
Gene sequence:
>585_bases ATGAGGTCTCGAACGCCCGAGGACCTCGCGGGTCGCTGCCCGCGCTGCTTCCTCCCCGCTGCCCTGTGTCTATGCGCCGA GGTGCCGTGCGTCTCCACGCGCACGGAGTTGCTCATCGTCCGGCACCACAAGGAGACGCTCAAATCCACCAACACCGCGC GCATGGCGGCGCTCGCCATTCCCCGGTGCAACATCGTCTCCTATGGCTCGCCGGGCGTCCCCTTCGACGCCTCCATCCTG GAGGGCGATGACACGTGGCTGCTGTTCCCGGACGCACACCACGAGCCCGCGCCCGGTGCGGCCTTTCCCAGCAGGCTCAT CATCCTGGATGGGAGCTGGGGACAAGCACGCCGCATGGTTCAGCGAGTCCCCGCGCTGCGGCGGCTGCCCGGCTTGAAGC TGCCACCGCCCGCGCCGGACTCGCGGCGCCTGCGTCGCCCACCCCACCCGGATGGCATGTCCACGCTGGAGGCCATCGCC GGTGCGCTTGCGTATCTGGAGGGCGAACACATCGCCCAACCGCTCCATGCACTGCACGAGCAGATGATTGACCGCGTCCT CGCGAGCCGGGGACGGAACACCTAG
Upstream 100 bases:
>100_bases ACCTGCCCGACGCGGAGTACGAGCCGGACGCGGATGACCGCTTCGTCGAGGAGAAGCTGCGCGAGGCCCGGACCCTCATG GAGCGATACCGCCAGGGCAA
Downstream 100 bases:
>100_bases CGCGCTCGACGCCGTCCAGGGGCCGCGCCCCGGCCGGTGCTTCGCGATGGCCACGAACAGCCCACTCAGGAGGGAGTTGG CGCCAACAGGCGTGGGCTTC
Product: DTW domain-containing protein
Products: NA
Alternate protein names: DTW Domain Containing Protein; DTW Domain Protein
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MRSRTPEDLAGRCPRCFLPAALCLCAEVPCVSTRTELLIVRHHKETLKSTNTARMAALAIPRCNIVSYGSPGVPFDASIL EGDDTWLLFPDAHHEPAPGAAFPSRLIILDGSWGQARRMVQRVPALRRLPGLKLPPPAPDSRRLRRPPHPDGMSTLEAIA GALAYLEGEHIAQPLHALHEQMIDRVLASRGRNT
Sequences:
>Translated_194_residues MRSRTPEDLAGRCPRCFLPAALCLCAEVPCVSTRTELLIVRHHKETLKSTNTARMAALAIPRCNIVSYGSPGVPFDASIL EGDDTWLLFPDAHHEPAPGAAFPSRLIILDGSWGQARRMVQRVPALRRLPGLKLPPPAPDSRRLRRPPHPDGMSTLEAIA GALAYLEGEHIAQPLHALHEQMIDRVLASRGRNT >Mature_194_residues MRSRTPEDLAGRCPRCFLPAALCLCAEVPCVSTRTELLIVRHHKETLKSTNTARMAALAIPRCNIVSYGSPGVPFDASIL EGDDTWLLFPDAHHEPAPGAAFPSRLIILDGSWGQARRMVQRVPALRRLPGLKLPPPAPDSRRLRRPPHPDGMSTLEAIA GALAYLEGEHIAQPLHALHEQMIDRVLASRGRNT
Specific function: Unknown
COG id: COG3148
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082133, Length=167, Percent_Identity=26.3473053892216, Blast_Score=62, Evalue=2e-11, Organism=Drosophila melanogaster, GI21358337, Length=198, Percent_Identity=28.7878787878788, Blast_Score=72, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21278; Mature: 21278
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSRTPEDLAGRCPRCFLPAALCLCAEVPCVSTRTELLIVRHHKETLKSTNTARMAALAI CCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHCCCHHHHHHHHC PRCNIVSYGSPGVPFDASILEGDDTWLLFPDAHHEPAPGAAFPSRLIILDGSWGQARRMV CCCCEEECCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCHHHHHHH QRVPALRRLPGLKLPPPAPDSRRLRRPPHPDGMSTLEAIAGALAYLEGEHIAQPLHALHE HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH QMIDRVLASRGRNT HHHHHHHHHCCCCC >Mature Secondary Structure MRSRTPEDLAGRCPRCFLPAALCLCAEVPCVSTRTELLIVRHHKETLKSTNTARMAALAI CCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHCCCHHHHHHHHC PRCNIVSYGSPGVPFDASILEGDDTWLLFPDAHHEPAPGAAFPSRLIILDGSWGQARRMV CCCCEEECCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCHHHHHHH QRVPALRRLPGLKLPPPAPDSRRLRRPPHPDGMSTLEAIAGALAYLEGEHIAQPLHALHE HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH QMIDRVLASRGRNT HHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA