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The map label for this gene is ychA [C]

Identifier: 108760398

GI number: 108760398

Start: 2295593

End: 2296417

Strand: Reverse

Name: ychA [C]

Synonym: MXAN_1961

Alternate gene names: 108760398

Gene position: 2296417-2295593 (Counterclockwise)

Preceding gene: 108762410

Following gene: 108761303

Centisome position: 25.13

GC content: 71.15

Gene sequence:

>825_bases
TTGGCGCGGGAGCGGCTGGTGTCGGCCCTGGCCGCGGAGCCCCCGCGGCTGGACCTGGCGGCGCTGGCCATCGCCACGCT
GGACAAGCCCCTGCTGGACGCCCCGGGGTGCCTGCACATGCTGGACGTGCTCGCGTGCCGGGTGCAGGTGGAGGCGGAGC
GGCTGAGCGAGAAGGGCGAAGTCCTGGCGCCGCTGCGCGCCTTGCGCCACGTGCTGGCGGACATCGAGGGCTTCCGCGGC
AACGAGGACGACTACCACTCCCCGGAGAACAGCTTCCTGGACCAGGTGCTGGAGCGGAAGCTGGGGCTGCCGATTACGTT
GTCCGTCGTCTACCTGGAGGTAGCGCGTCGCGCGGGCATCTCCCTGTACGGCGTCCCCTTCCCCGGCCACTTCCTGGTGG
CGCACGACGCGGGGGACCACAAGCTGGTCATGGACCCGTTCCATCAAGGGGACATCCTCACCGAGCACGGCTGCGAGGAG
CTGCTCAAGCGCGTGGCGCCGCAGCTCAAGTTCGACCGCAACATGCTGGCGCCCGCGCCGGTGGAGCTCATTACGTACCG
GATGCTGTCCAACCTGCGGCGCGTGTACCTGGGCAGAGAGGACTGTGAGCGCGGGCTGGCGGTGGTGGACCTGCTGCTGC
TCCTGGCGCCGGACCACCCGGGCGAGCTGCGCACCCGTGCCGCGCTGCTCAGCAACCTGGGGGCATACCGCGCGGCGCTG
AAGGACGTGGAGCGCTGCCTGGAGCTTTCGCCCGATGCCCCCGACCGCGACCGGCTGGAGATGACGGCCCGCGAGCTGCG
GGAGCGCGCCGCGCTGCTCAACTGA

Upstream 100 bases:

>100_bases
ACCTCCAGCATTCTGACGCTCGGCTGCCTGCCTTTGCCGTCCGGGCCCTCGTGGGTTACTGGTTCTTGCCGTGAGCATTC
CCTCTGGATTCAGCCCACCG

Downstream 100 bases:

>100_bases
AGGGAAGGGCTTTCACGTGGCTCGAGAGGTGAAGCCCTGGCGCCGGCTGCGGCGAGGGCTGGAGCATGACTTCAGCGTCG
CCCGGGTGCGCGAGGACTGG

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MARERLVSALAAEPPRLDLAALAIATLDKPLLDAPGCLHMLDVLACRVQVEAERLSEKGEVLAPLRALRHVLADIEGFRG
NEDDYHSPENSFLDQVLERKLGLPITLSVVYLEVARRAGISLYGVPFPGHFLVAHDAGDHKLVMDPFHQGDILTEHGCEE
LLKRVAPQLKFDRNMLAPAPVELITYRMLSNLRRVYLGREDCERGLAVVDLLLLLAPDHPGELRTRAALLSNLGAYRAAL
KDVERCLELSPDAPDRDRLEMTARELRERAALLN

Sequences:

>Translated_274_residues
MARERLVSALAAEPPRLDLAALAIATLDKPLLDAPGCLHMLDVLACRVQVEAERLSEKGEVLAPLRALRHVLADIEGFRG
NEDDYHSPENSFLDQVLERKLGLPITLSVVYLEVARRAGISLYGVPFPGHFLVAHDAGDHKLVMDPFHQGDILTEHGCEE
LLKRVAPQLKFDRNMLAPAPVELITYRMLSNLRRVYLGREDCERGLAVVDLLLLLAPDHPGELRTRAALLSNLGAYRAAL
KDVERCLELSPDAPDRDRLEMTARELRERAALLN
>Mature_273_residues
ARERLVSALAAEPPRLDLAALAIATLDKPLLDAPGCLHMLDVLACRVQVEAERLSEKGEVLAPLRALRHVLADIEGFRGN
EDDYHSPENSFLDQVLERKLGLPITLSVVYLEVARRAGISLYGVPFPGHFLVAHDAGDHKLVMDPFHQGDILTEHGCEEL
LKRVAPQLKFDRNMLAPAPVELITYRMLSNLRRVYLGREDCERGLAVVDLLLLLAPDHPGELRTRAALLSNLGAYRAALK
DVERCLELSPDAPDRDRLEMTARELRERAALLN

Specific function: Unknown

COG id: COG2912

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI16306500, Length=192, Percent_Identity=31.25, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI16306502, Length=185, Percent_Identity=31.8918918918919, Blast_Score=78, Evalue=7e-15,
Organism=Escherichia coli, GI1787465, Length=180, Percent_Identity=27.2222222222222, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30506; Mature: 30375

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARERLVSALAAEPPRLDLAALAIATLDKPLLDAPGCLHMLDVLACRVQVEAERLSEKGE
CCHHHHHHHHHCCCCCCHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCH
VLAPLRALRHVLADIEGFRGNEDDYHSPENSFLDQVLERKLGLPITLSVVYLEVARRAGI
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
SLYGVPFPGHFLVAHDAGDHKLVMDPFHQGDILTEHGCEELLKRVAPQLKFDRNMLAPAP
EEEECCCCCCEEEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCH
VELITYRMLSNLRRVYLGREDCERGLAVVDLLLLLAPDHPGELRTRAALLSNLGAYRAAL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
KDVERCLELSPDAPDRDRLEMTARELRERAALLN
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ARERLVSALAAEPPRLDLAALAIATLDKPLLDAPGCLHMLDVLACRVQVEAERLSEKGE
CHHHHHHHHHCCCCCCHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCH
VLAPLRALRHVLADIEGFRGNEDDYHSPENSFLDQVLERKLGLPITLSVVYLEVARRAGI
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
SLYGVPFPGHFLVAHDAGDHKLVMDPFHQGDILTEHGCEELLKRVAPQLKFDRNMLAPAP
EEEECCCCCCEEEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCH
VELITYRMLSNLRRVYLGREDCERGLAVVDLLLLLAPDHPGELRTRAALLSNLGAYRAAL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
KDVERCLELSPDAPDRDRLEMTARELRERAALLN
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]