| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is yhhW [C]
Identifier: 108760349
GI number: 108760349
Start: 2573519
End: 2574544
Strand: Direct
Name: yhhW [C]
Synonym: MXAN_2232
Alternate gene names: 108760349
Gene position: 2573519-2574544 (Clockwise)
Preceding gene: 108757492
Following gene: 108760682
Centisome position: 28.16
GC content: 68.91
Gene sequence:
>1026_bases ATGAGTCAGCAGCCAGAAGCCGTCCTTCGTGTGGAGCCGCTCGGGATGCCGTGGCGGACCCCGGATCCGTTTCTTTTTTG CGTCCACCACGACGACAAGTACCCCATGGGGAACGAGCGCCTCGGGCCGTCCGCCTCGCTGGCGGGCCGCAACCTGGGCC AGGACTTCGATGGGCGGGACGGCTGGAACATGTATCACGGCACCGTGGTGCCCGGTTTTCCCCAGCACCCGCACCGGGGG TTCGAGACCGTCACGGTGGTGCGTCGCGGGCTGCTCGACCACGCGGATTCCCTGGGGGCGGCGGCGCGCTTCGGCGGTGG GGATGTGCAGTGGCTCACCGCGGGCGCGGGCATCAATCATTCGGAGATGTTCCCGCTGCTCCAGCGCGACCAACCCAACC CGGTGGAGTTGTTTCAAATCTGGCTCAACCTGCCGCGGGCGAACAAGCTCGTGGAGCCGCACTTCTCCATGATGTGGAAC CACGTCATCCCGCGGCACGTTGCCCGGGACGCGGAAGGGCGCGCCACGGAAGTCACGGTGGTGGCCGGAAGCCTGGGAGA CGTGAAGGCGCCACCGCCGCCGCCCAAGTCGTGGGCCGCGCAGGCAGAGTCGGACGTGGCCATCTGGACGCTCAAGCTGG CCCCGGGCGCGCGGTGGACGCTGCCGGCGGCGGCCCGTGGCAGCAACCGGATGCTCTACTTCTTCCTCGGCTCCAGCCTG CGCGTGGCGGGGCGTGCCATTCCGCCGTCACATGGCATCGAGCTGCGGGCGGACGTCGCGGTGGAGTTGGAGAACGGCGC GGACGAGGCGGAGTTGTTGATGTTGCAGGGCCGTCCAATTGGAGAGCCCGTCGTGCAGTACGGCCCGTTCGTGATGAACT CGCGGCAGGAGATTCAGGAGGCCTTCGCGGACTACCAGCGCACGGGCTTCGGGGGCTGGCCGTGGCCGGCCAATGACCCG GTCCATCCGCCAGAGGAAGGGCGCTTCGCCCGGCACGGGGATGGGCGCATCGAACGTCCGGCCTGA
Upstream 100 bases:
>100_bases TACGGGGCAAGCGGCGCGGAGGGCTCGTTGTTACGCTCACCGGATAGAGCCCCGGCTCAGGGAATTTTTATGGGGCTCTG GAAGGGATGAGGCGTAGGAG
Downstream 100 bases:
>100_bases GCGGGAGCACCGTCAGCTGGAGCCCCGCTGCATGGGCGCTGAGTCTTCCCATTCTGGATGCGGCCGTGCAGCGGGGCGGG GCCATCCGCCGCCCTTGATG
Product: pirin family protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein PA2418 [H]
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MSQQPEAVLRVEPLGMPWRTPDPFLFCVHHDDKYPMGNERLGPSASLAGRNLGQDFDGRDGWNMYHGTVVPGFPQHPHRG FETVTVVRRGLLDHADSLGAAARFGGGDVQWLTAGAGINHSEMFPLLQRDQPNPVELFQIWLNLPRANKLVEPHFSMMWN HVIPRHVARDAEGRATEVTVVAGSLGDVKAPPPPPKSWAAQAESDVAIWTLKLAPGARWTLPAAARGSNRMLYFFLGSSL RVAGRAIPPSHGIELRADVAVELENGADEAELLMLQGRPIGEPVVQYGPFVMNSRQEIQEAFADYQRTGFGGWPWPANDP VHPPEEGRFARHGDGRIERPA
Sequences:
>Translated_341_residues MSQQPEAVLRVEPLGMPWRTPDPFLFCVHHDDKYPMGNERLGPSASLAGRNLGQDFDGRDGWNMYHGTVVPGFPQHPHRG FETVTVVRRGLLDHADSLGAAARFGGGDVQWLTAGAGINHSEMFPLLQRDQPNPVELFQIWLNLPRANKLVEPHFSMMWN HVIPRHVARDAEGRATEVTVVAGSLGDVKAPPPPPKSWAAQAESDVAIWTLKLAPGARWTLPAAARGSNRMLYFFLGSSL RVAGRAIPPSHGIELRADVAVELENGADEAELLMLQGRPIGEPVVQYGPFVMNSRQEIQEAFADYQRTGFGGWPWPANDP VHPPEEGRFARHGDGRIERPA >Mature_340_residues SQQPEAVLRVEPLGMPWRTPDPFLFCVHHDDKYPMGNERLGPSASLAGRNLGQDFDGRDGWNMYHGTVVPGFPQHPHRGF ETVTVVRRGLLDHADSLGAAARFGGGDVQWLTAGAGINHSEMFPLLQRDQPNPVELFQIWLNLPRANKLVEPHFSMMWNH VIPRHVARDAEGRATEVTVVAGSLGDVKAPPPPPKSWAAQAESDVAIWTLKLAPGARWTLPAAARGSNRMLYFFLGSSLR VAGRAIPPSHGIELRADVAVELENGADEAELLMLQGRPIGEPVVQYGPFVMNSRQEIQEAFADYQRTGFGGWPWPANDPV HPPEEGRFARHGDGRIERPA
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=246, Percent_Identity=32.520325203252, Blast_Score=119, Evalue=5e-27, Organism=Homo sapiens, GI4505823, Length=246, Percent_Identity=32.520325203252, Blast_Score=119, Evalue=5e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR008778 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 37588; Mature: 37457
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQQPEAVLRVEPLGMPWRTPDPFLFCVHHDDKYPMGNERLGPSASLAGRNLGQDFDGRD CCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC GWNMYHGTVVPGFPQHPHRGFETVTVVRRGLLDHADSLGAAARFGGGDVQWLTAGAGINH CCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCCCEEEEEECCCCCH SEMFPLLQRDQPNPVELFQIWLNLPRANKLVEPHFSMMWNHVIPRHVARDAEGRATEVTV HHHCHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEE VAGSLGDVKAPPPPPKSWAAQAESDVAIWTLKLAPGARWTLPAAARGSNRMLYFFLGSSL EECCCCCCCCCCCCCHHHHHCCCCCEEEEEEEECCCCCEECCCCCCCCCCEEEEEECCCE RVAGRAIPPSHGIELRADVAVELENGADEAELLMLQGRPIGEPVVQYGPFVMNSRQEIQE EECCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEECCCCCCCHHHHHCCEEECCHHHHHH AFADYQRTGFGGWPWPANDPVHPPEEGRFARHGDGRIERPA HHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC >Mature Secondary Structure SQQPEAVLRVEPLGMPWRTPDPFLFCVHHDDKYPMGNERLGPSASLAGRNLGQDFDGRD CCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC GWNMYHGTVVPGFPQHPHRGFETVTVVRRGLLDHADSLGAAARFGGGDVQWLTAGAGINH CCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCCCEEEEEECCCCCH SEMFPLLQRDQPNPVELFQIWLNLPRANKLVEPHFSMMWNHVIPRHVARDAEGRATEVTV HHHCHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEE VAGSLGDVKAPPPPPKSWAAQAESDVAIWTLKLAPGARWTLPAAARGSNRMLYFFLGSSL EECCCCCCCCCCCCCHHHHHCCCCCEEEEEEEECCCCCEECCCCCCCCCCEEEEEECCCE RVAGRAIPPSHGIELRADVAVELENGADEAELLMLQGRPIGEPVVQYGPFVMNSRQEIQE EECCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEECCCCCCCHHHHHCCEEECCHHHHHH AFADYQRTGFGGWPWPANDPVHPPEEGRFARHGDGRIERPA HHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]