| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is aglU
Identifier: 108760348
GI number: 108760348
Start: 3531468
End: 3533111
Strand: Direct
Name: aglU
Synonym: MXAN_3008
Alternate gene names: NA
Gene position: 3531468-3533111 (Clockwise)
Preceding gene: 108763266
Following gene: 108757715
Centisome position: 38.64
GC content: 69.65
Gene sequence:
>1644_bases ATGATGCGGATGCGGCAGGGGCGGCTGTGGACCGCGGGCCTGATGGCCTCGCTGGTGATGGCGGGCACGGGCTGCAAGCA GGGCGAAAATGGCGGCTCGGAGGCCCCGGGCGTGCGGCGCGCCAAGGCCGCCGCGGCGGCGGAGAAGCCACCTCCGCCCG GTGCCCCCGGCGCGGGGCAGGGCACGCTCCTGGCCTCGGGCCGCGTGACGGACCTGCGGGTGACGTCGGACGGCCGCTTC GCCACGTACCTCGTCAACGGGCAGAAGCCCCGGCTGGACGGCATTCCGCCGCAGATGGTGCTGGGCGAGCTGTACGCGGT GCCCGTGGAGGGCGGCGAGCCGCGCAAGCTGGGCGAGGGCGTGACGAACGTCCCCGGCGGACAGTTGGTGGCGCCGGGCT CGAAGTACGTCCTCTTCCTCACTGGCTACAACCCGGCGACGCAGTCGGGCGCGCTGAACGTGGCGTCGCTGGATGACGCG AAGGCGGCGCCTGTCGTGCTGGGCACGGCGGTCAGCTACATGCTGCCCAGCCCGGACGGGACGAAGCTGGCCTACGTGGA TGGCGGCAAGCTGAAGCTGGGCACGCTGCCGTCAGGACCCTTCACGGACGTGGCGGCGGAGGTCAGCACCGCCCAGTTCA CGCCGGACGGCAAGACGCTGCTCTTCAAGCGCCGGCTGTCCGCGGCGGGGGGCATGGCGGCCATCTCCGTGGAGAAGCCA GACGCGCCGCCCATGAAGGTGGGGGACCAGGTGGGGGACTACGAAGTCTCCCCGGATGGTCAGCGCGTGGCCTTCCAGGT GCGCAGCGAGTCGGTGCGGGGGCTGTATGACTTGTACTTGGCGGAGCTGCCCGAACTGAAGGCGAAGCGGTTGGCGGTGG CCTCGGGTGTGTTTGCCTTTTCGCCCGATGGCAAGTGGCTGGCGCGCACGGAGAACGGCAAGCCGAACGTGCCAGGGGAC TTGTACCTGGGCCCGGCGGCGGGGGGCGCGGGGCGCAAGCTGGGCGTGCAGGTGGAGAAGCTGGCCTTCTCGCCGGACTC GCAGGCGGTGGGCTTCCTGGAGAAGTATGACTCGACTGCGAACGCGGGGCTGATGTCGGTGGCCGCGCTGCCGGACGGCA CGACGAAGCAGGTGGGCGGCCGCGTGCCCAACTTCGTCTGGGGCTCGGACGGGCGCTATGTGGCGTTCCTCTCGCGCATC CTCAAGCCCGCGTATTCGGTGGACCTGATGCTGTACACCCTGGGGGAGGAGCGGGCGGCGAAGGTGCAGCAGGGCGTCTT TGGCTATGGCTTCACGCCGGGCAACGGGCAGGTGGTGTTCCGCTCCAACTGCATCCGCAATGGACGCTCGTGTGACTTCA TGGCCATGGACCTGCCCCGGCAGGCGGACCCTCGCACGTGGCTGCAAGGCATCTTCAGCTACAAGCTGTCCGATGATGGC CAGCGGGTGCTCGTCACGTATGCCCGCATGGACTCGGACACCTACGATGTGGCGGTGTACGACGTGAAGACCCAGGCGCG GAAGACGCTGGATCAGGGCATCCAGGTGCCGGTGTCCTTCGGGGGCAAGAATGACTCGCTGGCCGTGTACGCGATTACGC AGGGCCCGAAGGCCGGCATCTACAGCGTCCCCGCGACGCCGTAG
Upstream 100 bases:
>100_bases CGGCGTATTCGGCGCGAGCGAAGCAGGACCTGGCGGCATGGCTGCCGCATGCGGGCGTCCCGGCGGCGGGCGCCCCCGAG CACGTGGATCAGAGGAGCGC
Downstream 100 bases:
>100_bases CTTTTGATTGTTGAGGATCGTGCGATTCGTCGGGCGGTGTGCTTACTTCCGCCGCCTGTATGGCTTCGCTCATCTATCGC CGCTACGGCGGCTCGCTCCA
Product: adventurous gliding motility protein AglU
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MMRMRQGRLWTAGLMASLVMAGTGCKQGENGGSEAPGVRRAKAAAAAEKPPPPGAPGAGQGTLLASGRVTDLRVTSDGRF ATYLVNGQKPRLDGIPPQMVLGELYAVPVEGGEPRKLGEGVTNVPGGQLVAPGSKYVLFLTGYNPATQSGALNVASLDDA KAAPVVLGTAVSYMLPSPDGTKLAYVDGGKLKLGTLPSGPFTDVAAEVSTAQFTPDGKTLLFKRRLSAAGGMAAISVEKP DAPPMKVGDQVGDYEVSPDGQRVAFQVRSESVRGLYDLYLAELPELKAKRLAVASGVFAFSPDGKWLARTENGKPNVPGD LYLGPAAGGAGRKLGVQVEKLAFSPDSQAVGFLEKYDSTANAGLMSVAALPDGTTKQVGGRVPNFVWGSDGRYVAFLSRI LKPAYSVDLMLYTLGEERAAKVQQGVFGYGFTPGNGQVVFRSNCIRNGRSCDFMAMDLPRQADPRTWLQGIFSYKLSDDG QRVLVTYARMDSDTYDVAVYDVKTQARKTLDQGIQVPVSFGGKNDSLAVYAITQGPKAGIYSVPATP
Sequences:
>Translated_547_residues MMRMRQGRLWTAGLMASLVMAGTGCKQGENGGSEAPGVRRAKAAAAAEKPPPPGAPGAGQGTLLASGRVTDLRVTSDGRF ATYLVNGQKPRLDGIPPQMVLGELYAVPVEGGEPRKLGEGVTNVPGGQLVAPGSKYVLFLTGYNPATQSGALNVASLDDA KAAPVVLGTAVSYMLPSPDGTKLAYVDGGKLKLGTLPSGPFTDVAAEVSTAQFTPDGKTLLFKRRLSAAGGMAAISVEKP DAPPMKVGDQVGDYEVSPDGQRVAFQVRSESVRGLYDLYLAELPELKAKRLAVASGVFAFSPDGKWLARTENGKPNVPGD LYLGPAAGGAGRKLGVQVEKLAFSPDSQAVGFLEKYDSTANAGLMSVAALPDGTTKQVGGRVPNFVWGSDGRYVAFLSRI LKPAYSVDLMLYTLGEERAAKVQQGVFGYGFTPGNGQVVFRSNCIRNGRSCDFMAMDLPRQADPRTWLQGIFSYKLSDDG QRVLVTYARMDSDTYDVAVYDVKTQARKTLDQGIQVPVSFGGKNDSLAVYAITQGPKAGIYSVPATP >Mature_547_residues MMRMRQGRLWTAGLMASLVMAGTGCKQGENGGSEAPGVRRAKAAAAAEKPPPPGAPGAGQGTLLASGRVTDLRVTSDGRF ATYLVNGQKPRLDGIPPQMVLGELYAVPVEGGEPRKLGEGVTNVPGGQLVAPGSKYVLFLTGYNPATQSGALNVASLDDA KAAPVVLGTAVSYMLPSPDGTKLAYVDGGKLKLGTLPSGPFTDVAAEVSTAQFTPDGKTLLFKRRLSAAGGMAAISVEKP DAPPMKVGDQVGDYEVSPDGQRVAFQVRSESVRGLYDLYLAELPELKAKRLAVASGVFAFSPDGKWLARTENGKPNVPGD LYLGPAAGGAGRKLGVQVEKLAFSPDSQAVGFLEKYDSTANAGLMSVAALPDGTTKQVGGRVPNFVWGSDGRYVAFLSRI LKPAYSVDLMLYTLGEERAAKVQQGVFGYGFTPGNGQVVFRSNCIRNGRSCDFMAMDLPRQADPRTWLQGIFSYKLSDDG QRVLVTYARMDSDTYDVAVYDVKTQARKTLDQGIQVPVSFGGKNDSLAVYAITQGPKAGIYSVPATP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57535; Mature: 57535
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRMRQGRLWTAGLMASLVMAGTGCKQGENGGSEAPGVRRAKAAAAAEKPPPPGAPGAGQ CCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC GTLLASGRVTDLRVTSDGRFATYLVNGQKPRLDGIPPQMVLGELYAVPVEGGEPRKLGEG CEEEECCCEEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHCCEEEEECCCCCCHHHCCC VTNVPGGQLVAPGSKYVLFLTGYNPATQSGALNVASLDDAKAAPVVLGTAVSYMLPSPDG CCCCCCCCEECCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCEEEECHHHEECCCCCC TKLAYVDGGKLKLGTLPSGPFTDVAAEVSTAQFTPDGKTLLFKRRLSAAGGMAAISVEKP CEEEEEECCEEEECCCCCCCCHHHHHHCEEEEECCCCCEEEEEEHHCCCCCEEEEEECCC DAPPMKVGDQVGDYEVSPDGQRVAFQVRSESVRGLYDLYLAELPELKAKRLAVASGVFAF CCCCCCCCCCCCCEEECCCCCEEEEEEECCHHHHHHHHHHHHCCCHHHHHEEHCCCEEEE SPDGKWLARTENGKPNVPGDLYLGPAAGGAGRKLGVQVEKLAFSPDSQAVGFLEKYDSTA CCCCCEEEECCCCCCCCCCCEEECCCCCCCCCEECEEEEEEEECCCCHHHHHHHHHCCCC NAGLMSVAALPDGTTKQVGGRVPNFVWGSDGRYVAFLSRILKPAYSVDLMLYTLGEERAA CCCEEEEEECCCCCHHHHCCCCCCEEECCCCCHHHHHHHHHCCCCEEEEEEEECCCHHHH KVQQGVFGYGFTPGNGQVVFRSNCIRNGRSCDFMAMDLPRQADPRTWLQGIFSYKLSDDG HHHCCCEECCCCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHEEEECCCC QRVLVTYARMDSDTYDVAVYDVKTQARKTLDQGIQVPVSFGGKNDSLAVYAITQGPKAGI CEEEEEEEECCCCCEEEEEEEEHHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCCCCCE YSVPATP EECCCCC >Mature Secondary Structure MMRMRQGRLWTAGLMASLVMAGTGCKQGENGGSEAPGVRRAKAAAAAEKPPPPGAPGAGQ CCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC GTLLASGRVTDLRVTSDGRFATYLVNGQKPRLDGIPPQMVLGELYAVPVEGGEPRKLGEG CEEEECCCEEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHCCEEEEECCCCCCHHHCCC VTNVPGGQLVAPGSKYVLFLTGYNPATQSGALNVASLDDAKAAPVVLGTAVSYMLPSPDG CCCCCCCCEECCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCEEEECHHHEECCCCCC TKLAYVDGGKLKLGTLPSGPFTDVAAEVSTAQFTPDGKTLLFKRRLSAAGGMAAISVEKP CEEEEEECCEEEECCCCCCCCHHHHHHCEEEEECCCCCEEEEEEHHCCCCCEEEEEECCC DAPPMKVGDQVGDYEVSPDGQRVAFQVRSESVRGLYDLYLAELPELKAKRLAVASGVFAF CCCCCCCCCCCCCEEECCCCCEEEEEEECCHHHHHHHHHHHHCCCHHHHHEEHCCCEEEE SPDGKWLARTENGKPNVPGDLYLGPAAGGAGRKLGVQVEKLAFSPDSQAVGFLEKYDSTA CCCCCEEEECCCCCCCCCCCEEECCCCCCCCCEECEEEEEEEECCCCHHHHHHHHHCCCC NAGLMSVAALPDGTTKQVGGRVPNFVWGSDGRYVAFLSRILKPAYSVDLMLYTLGEERAA CCCEEEEEECCCCCHHHHCCCCCCEEECCCCCHHHHHHHHHCCCCEEEEEEEECCCHHHH KVQQGVFGYGFTPGNGQVVFRSNCIRNGRSCDFMAMDLPRQADPRTWLQGIFSYKLSDDG HHHCCCEECCCCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHEEEECCCC QRVLVTYARMDSDTYDVAVYDVKTQARKTLDQGIQVPVSFGGKNDSLAVYAITQGPKAGI CEEEEEEEECCCCCEEEEEEEEHHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCCCCCE YSVPATP EECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA