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The map label for this gene is nifU [H]

Identifier: 108760309

GI number: 108760309

Start: 1348542

End: 1349000

Strand: Direct

Name: nifU [H]

Synonym: MXAN_1157

Alternate gene names: 108760309

Gene position: 1348542-1349000 (Clockwise)

Preceding gene: 108764069

Following gene: 108757287

Centisome position: 14.75

GC content: 69.06

Gene sequence:

>459_bases
GTGAGTGCGTCGGATGACTTGAAGGACCTCTATCAAGAGGTCGTGCTGGAGCACTCCAAGCGGCCGCGCAACTACCGCGT
GGTGGAGGGCGCCACCGCGGAGGCGGCGGGCCACAACCCGCTGTGCGGTGACCAGTTGGTGGTGACGCTGAAGGTGGAGG
GCGGCGTCATCAAGGACGTGGCCTTCCAGGGCCAGGGCTGCGCCATCTCCAAGGCGTCCGCGTCGTTGATGACGGGGGCG
GTGAAGGACCGGACGCGCGCGGAGGCGGAGGACCTCTTCGAGCGCGTCCACAAGCTGGTGACGGAAGGTCCGGAGTCGGT
GGACGTGGACGCGCTGGGCAAGCTGGCGGTGCTGTCCGGCGTCAGTGAGTTTCCCGCGCGGGTGAAGTGCGCCAGCCTGG
CCTGGCACACGCTGCGCGCGGCATTGGAGGGACGCGGCGAGGCCGTGTCCACGGAGTAG

Upstream 100 bases:

>100_bases
AGGTGCCGGCCACGTCCCGGGCGTCGCTGGCGCTCTACAACACGCGCGAGGATGTGGACGCGCTCGTCCGTGGCCTGCAC
AAGGTCCTGGAGGTGTTCCA

Downstream 100 bases:

>100_bases
GGGTGGAGGGCCACATGCGAGGAATGATGGCGGTGCTGGAGCGCGACGTGTCCGCGACAATCATCCCCAGCGGGGACCGG
GTGGTGCTGCCCGAAGGCGC

Product: NifU family SUF system FeS assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MSASDDLKDLYQEVVLEHSKRPRNYRVVEGATAEAAGHNPLCGDQLVVTLKVEGGVIKDVAFQGQGCAISKASASLMTGA
VKDRTRAEAEDLFERVHKLVTEGPESVDVDALGKLAVLSGVSEFPARVKCASLAWHTLRAALEGRGEAVSTE

Sequences:

>Translated_152_residues
MSASDDLKDLYQEVVLEHSKRPRNYRVVEGATAEAAGHNPLCGDQLVVTLKVEGGVIKDVAFQGQGCAISKASASLMTGA
VKDRTRAEAEDLFERVHKLVTEGPESVDVDALGKLAVLSGVSEFPARVKCASLAWHTLRAALEGRGEAVSTE
>Mature_151_residues
SASDDLKDLYQEVVLEHSKRPRNYRVVEGATAEAAGHNPLCGDQLVVTLKVEGGVIKDVAFQGQGCAISKASASLMTGAV
KDRTRAEAEDLFERVHKLVTEGPESVDVDALGKLAVLSGVSEFPARVKCASLAWHTLRAALEGRGEAVSTE

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002871
- InterPro:   IPR011341 [H]

Pfam domain/function: PF01592 NifU_N [H]

EC number: NA

Molecular weight: Translated: 16161; Mature: 16030

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASDDLKDLYQEVVLEHSKRPRNYRVVEGATAEAAGHNPLCGDQLVVTLKVEGGVIKDV
CCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCEEEHH
AFQGQGCAISKASASLMTGAVKDRTRAEAEDLFERVHKLVTEGPESVDVDALGKLAVLSG
EECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC
VSEFPARVKCASLAWHTLRAALEGRGEAVSTE
HHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SASDDLKDLYQEVVLEHSKRPRNYRVVEGATAEAAGHNPLCGDQLVVTLKVEGGVIKDV
CCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCEEEHH
AFQGQGCAISKASASLMTGAVKDRTRAEAEDLFERVHKLVTEGPESVDVDALGKLAVLSG
EECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC
VSEFPARVKCASLAWHTLRAALEGRGEAVSTE
HHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]