| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is atoC [C]
Identifier: 108760306
GI number: 108760306
Start: 6482651
End: 6483079
Strand: Direct
Name: atoC [C]
Synonym: MXAN_5189
Alternate gene names: 108760306
Gene position: 6482651-6483079 (Clockwise)
Preceding gene: 108759412
Following gene: 108759464
Centisome position: 70.93
GC content: 67.37
Gene sequence:
>429_bases GTGGGCAGCGAAGCGCTCGCATCCGGGAAGGACGAATCCCCACCGCCGCGCGGGTTTCTCAAGGGCATGGGCGCCGAACG AATCAAGGTCTTGCTGGTCGAGGACGACGGGGACAGCCGGGAGCTGCTGGCGGAGCTGCTGGAGTCGGAGTTCGACGTGA AGACGGCCACGGATGGCTTGGCCGGCCTCGAGATGTTCGAGGCCGAGCACCCGGACGTGGTGGTGACGGACGAATCCCTC CCAGGCATGTGCGGCACCGAGCTCGCGCAGAAGGTCAAGGAGCGCGAGCCCCGGGCCCGCGTCATCCTCGTGTCCGGTTA CACACAGGTGCAGGGCTCCGAACACTGTGACGTGGTGCTGCGCAAGCCCATCGACGTGGAACGCCTCAGCGCCGCGGTGT GCAGGCTGGGCGACGAAGCTCGACACTGA
Upstream 100 bases:
>100_bases ATTTCCTCCGAGCCCAAAGATGGGCAGCCTGACGCCCGGTGGTGAGCCACCCCCTGCCCATTAATGGAGCCCGCCTGACG CTCCCCTGCTCTCCGGCCGG
Downstream 100 bases:
>100_bases ACGAAGTGACGGGCCCCGGGTGCCGTTCCACGGAACCCAGACCTACTATTTCCCTCCAGACACCCACGGGCAGGAGGGAC GGCGATGAAATACTGTGCGA
Product: response regulator
Products: NA
Alternate protein names: Response Regulator Receiver Protein
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MGSEALASGKDESPPPRGFLKGMGAERIKVLLVEDDGDSRELLAELLESEFDVKTATDGLAGLEMFEAEHPDVVVTDESL PGMCGTELAQKVKEREPRARVILVSGYTQVQGSEHCDVVLRKPIDVERLSAAVCRLGDEARH
Sequences:
>Translated_142_residues MGSEALASGKDESPPPRGFLKGMGAERIKVLLVEDDGDSRELLAELLESEFDVKTATDGLAGLEMFEAEHPDVVVTDESL PGMCGTELAQKVKEREPRARVILVSGYTQVQGSEHCDVVLRKPIDVERLSAAVCRLGDEARH >Mature_141_residues GSEALASGKDESPPPRGFLKGMGAERIKVLLVEDDGDSRELLAELLESEFDVKTATDGLAGLEMFEAEHPDVVVTDESLP GMCGTELAQKVKEREPRARVILVSGYTQVQGSEHCDVVLRKPIDVERLSAAVCRLGDEARH
Specific function: Member Of The Two-Component Regulatory System Atos/Atoc Involved In The Transcriptional Regulation Of The Ato Genes For Acetoacetate Metabolism. Also An Inhibitor Of Polyamine Biosynthesis. [C]
COG id: COG2197
COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15404; Mature: 15272
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSEALASGKDESPPPRGFLKGMGAERIKVLLVEDDGDSRELLAELLESEFDVKTATDGL CCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCH AGLEMFEAEHPDVVVTDESLPGMCGTELAQKVKEREPRARVILVSGYTQVQGSEHCDVVL HHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEECCEECCCCCCCCEEE RKPIDVERLSAAVCRLGDEARH CCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure GSEALASGKDESPPPRGFLKGMGAERIKVLLVEDDGDSRELLAELLESEFDVKTATDGL CCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCH AGLEMFEAEHPDVVVTDESLPGMCGTELAQKVKEREPRARVILVSGYTQVQGSEHCDVVL HHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEECCEECCCCCCCCEEE RKPIDVERLSAAVCRLGDEARH CCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA