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The map label for this gene is yafE [C]

Identifier: 108760285

GI number: 108760285

Start: 4729983

End: 4730855

Strand: Reverse

Name: yafE [C]

Synonym: MXAN_3931

Alternate gene names: 108760285

Gene position: 4730855-4729983 (Counterclockwise)

Preceding gene: 108759037

Following gene: 108760244

Centisome position: 51.76

GC content: 63.34

Gene sequence:

>873_bases
GTGACGCGGTCGGTGGGCATCGTCATCCACAAAGTGGTGCCATCATTCCGTCTGGCGGTCGCCCGGTTCCAATACAACAT
GGCGTCGAAGATGTACTCACACCAGGGCTACAAGTTCATCAACTGTGGCTACGCGGACATGGAGGGCGACCACAAGGCGG
TGGATTTCAACCGGCCGGAGAATGTGTATGTGTTGTGGGAAAGCCTGTACCAGCGCGTGGTGGGGCAGGCGGAGCTTTCC
GGTCGCGAAGTGCTGGAGGTCGGCTGCGGCCGCGGCGGTGGCAGTGAATACCTGATGACGCGGCTGAAGCCTCGCTCACT
GACGGCGGTGGACCTCTCCGACGTGGCCATCGCGCGCTGCAAGGAGAACTACCGGCTGGACGGGCTGTCCTTCCAGGTGG
GCAATGCCTGCGCGCTCCCGTTCGAGGACAGGCGCTTCGACGTGGTGGTGAATATCGAGTCGTCGCACTGCTACCCCTCG
CAGTTGACGTTCTTCGAGGAGGTCAAGCGGGTGCTCAAGCCCGGGGGCGCTTTCTGCTTCGCGGACATCACCGAGTCCGC
CGAGCACACCGCCCGCATCAACGAAGAGTTCAAGGCGCTGGGCTTCACGGTGGTCCACCATGAGAACATCACGGCGAACG
TGGTGAAGGCGTTGAACGTGGTGAAGGAAACGCCTCAGTTCACCGAGGCCTTCGAGCGCTGGGAGTCGCCGAACAAGAAG
GGCAACATGAAGGTCCCCTTGATGGTCATCAACGGGACGCTGAAGGACCTGAACTCGGGCAAGGAGTACCAGCGCTGGGT
GGTGCGCCGCGAGGAGGCGACCGAGCGCCCGGTTGCTGGCGAGCAGGCGCGGGCCGCCGCTGCCATGGCGTGA

Upstream 100 bases:

>100_bases
CAACGGGTGATTGCCGGATTCTGTGCCCGGTTCTACGGGAAATAGTTGTTACGAAAGGGCGTTCGAAGTGAAGAAGACAC
TGGTTCAGGTTCAGGCGGCG

Downstream 100 bases:

>100_bases
TGCGGATGGTGCGCCAAGGGGGCGCGCGAGCGGTGGCCCGCTCTCGCGCCCACGTCCTGGCTAGTCGTCCTGGCTCGGAG
CGGGAGCGGGCGCAGGGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MTRSVGIVIHKVVPSFRLAVARFQYNMASKMYSHQGYKFINCGYADMEGDHKAVDFNRPENVYVLWESLYQRVVGQAELS
GREVLEVGCGRGGGSEYLMTRLKPRSLTAVDLSDVAIARCKENYRLDGLSFQVGNACALPFEDRRFDVVVNIESSHCYPS
QLTFFEEVKRVLKPGGAFCFADITESAEHTARINEEFKALGFTVVHHENITANVVKALNVVKETPQFTEAFERWESPNKK
GNMKVPLMVINGTLKDLNSGKEYQRWVVRREEATERPVAGEQARAAAAMA

Sequences:

>Translated_290_residues
MTRSVGIVIHKVVPSFRLAVARFQYNMASKMYSHQGYKFINCGYADMEGDHKAVDFNRPENVYVLWESLYQRVVGQAELS
GREVLEVGCGRGGGSEYLMTRLKPRSLTAVDLSDVAIARCKENYRLDGLSFQVGNACALPFEDRRFDVVVNIESSHCYPS
QLTFFEEVKRVLKPGGAFCFADITESAEHTARINEEFKALGFTVVHHENITANVVKALNVVKETPQFTEAFERWESPNKK
GNMKVPLMVINGTLKDLNSGKEYQRWVVRREEATERPVAGEQARAAAAMA
>Mature_289_residues
TRSVGIVIHKVVPSFRLAVARFQYNMASKMYSHQGYKFINCGYADMEGDHKAVDFNRPENVYVLWESLYQRVVGQAELSG
REVLEVGCGRGGGSEYLMTRLKPRSLTAVDLSDVAIARCKENYRLDGLSFQVGNACALPFEDRRFDVVVNIESSHCYPSQ
LTFFEEVKRVLKPGGAFCFADITESAEHTARINEEFKALGFTVVHHENITANVVKALNVVKETPQFTEAFERWESPNKKG
NMKVPLMVINGTLKDLNSGKEYQRWVVRREEATERPVAGEQARAAAAMA

Specific function: Catalyzes the methylation of the lipid moiety of the intermediate compounds phthiotriol and glycosylated phenolphthiotriol dimycoserosates to form phthiocerol dimycocerosates (DIM A) and glycosylated phenolphthiocerol dimycocerosates (PGL) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. Phthiotriol/phenolphthiotriol dimycocerosates methyltransferase family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17540496, Length=158, Percent_Identity=32.9113924050633, Blast_Score=79, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 32628; Mature: 32496

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: PS01184 UBIE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRSVGIVIHKVVPSFRLAVARFQYNMASKMYSHQGYKFINCGYADMEGDHKAVDFNRPE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEECCCCCC
NVYVLWESLYQRVVGQAELSGREVLEVGCGRGGGSEYLMTRLKPRSLTAVDLSDVAIARC
CEEEEHHHHHHHHHCHHHCCCHHHHEECCCCCCCCHHHHHHCCCCCEEEECHHHHHHHHH
KENYRLDGLSFQVGNACALPFEDRRFDVVVNIESSHCYPSQLTFFEEVKRVLKPGGAFCF
HCCCCCCCEEEECCCEEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEE
ADITESAEHTARINEEFKALGFTVVHHENITANVVKALNVVKETPQFTEAFERWESPNKK
EEHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
GNMKVPLMVINGTLKDLNSGKEYQRWVVRREEATERPVAGEQARAAAAMA
CCEEEEEEEECCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC
>Mature Secondary Structure 
TRSVGIVIHKVVPSFRLAVARFQYNMASKMYSHQGYKFINCGYADMEGDHKAVDFNRPE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEECCCCCC
NVYVLWESLYQRVVGQAELSGREVLEVGCGRGGGSEYLMTRLKPRSLTAVDLSDVAIARC
CEEEEHHHHHHHHHCHHHCCCHHHHEECCCCCCCCHHHHHHCCCCCEEEECHHHHHHHHH
KENYRLDGLSFQVGNACALPFEDRRFDVVVNIESSHCYPSQLTFFEEVKRVLKPGGAFCF
HCCCCCCCEEEECCCEEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEE
ADITESAEHTARINEEFKALGFTVVHHENITANVVKALNVVKETPQFTEAFERWESPNKK
EEHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
GNMKVPLMVINGTLKDLNSGKEYQRWVVRREEATERPVAGEQARAAAAMA
CCEEEEEEEECCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA