| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is ywbO [H]
Identifier: 108760220
GI number: 108760220
Start: 2628929
End: 2629570
Strand: Reverse
Name: ywbO [H]
Synonym: MXAN_2266
Alternate gene names: 108760220
Gene position: 2629570-2628929 (Counterclockwise)
Preceding gene: 108762057
Following gene: 108762273
Centisome position: 28.77
GC content: 72.12
Gene sequence:
>642_bases ATGGCCCAATCGGACACGCCGGTCCGCCTCGACGTCTGGAGCGATTACGTCTGCCCCTTCTGTTACCTCGAGCTTCCCGT CCTCGAGCAGTTGCATGCCCGGCTGGGCTCGGCGCTCGACATCCACTGGCGCGCGTTCGAGCTGCGTCCGGTGCCCGCGC GACCGCTCGCCCCGGTGAGTGAGCCCCCTCGGTCGGCCTGGGCCCGCTCCGTCTACCCGTTGGCCGAGCAGCGGGGCCTG ACGATGAGGCCGCCGCCGGTGCAACCGAAGAGCCGGCTGGCGCTCGAAGCCGCCGAGTTCGCCAAGGACGCTGGGTCCTT CTCCCCGTTCCATGAGGCCCTCTTCCGTGCCTTCTTCGCGGACGGCCAGGACATCGGGGACCTGCGCGTGCTGGGGGCGC TGGCGGAGGACGTAGGCATGGACCGCGAGTCCATGACACGCGCACTGGAGGCGGGCCGGTACACCGCGCGCGTGCTCGCC GACGAGGAGGAGGCACAACGGCTGGGGATCCGCGGCGTCCCGGCCATGCGGCTCGCGGGCAATGGGCCCGTGCTCCTGCT GACCGGCGCTCAGCCGGAAGAAGCCGTTCGCGCCGCCTTCGCGCGCGTCCGGCCGGGCCCCTCCCTGAGTGCCGTGCACT GA
Upstream 100 bases:
>100_bases CTGGAGTCCAGGAGGACCGGCGCCACTGCATCCCGCGCACGCACGGGCATGGCCAACGTGAGGAGATGTCCCCTGCGGGG GACTTCAAGGAGCCTCGCCC
Downstream 100 bases:
>100_bases GCGCGCGGCCACCGCCGTCCTGGCGGGAGCACTTCGCGCCGAATAGGGTGCCGGCATGGAGCACCGCCCGACCCTTGTCT TCGCTGATGGCGCCTGTTCA
Product: thioredoxin domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MAQSDTPVRLDVWSDYVCPFCYLELPVLEQLHARLGSALDIHWRAFELRPVPARPLAPVSEPPRSAWARSVYPLAEQRGL TMRPPPVQPKSRLALEAAEFAKDAGSFSPFHEALFRAFFADGQDIGDLRVLGALAEDVGMDRESMTRALEAGRYTARVLA DEEEAQRLGIRGVPAMRLAGNGPVLLLTGAQPEEAVRAAFARVRPGPSLSAVH
Sequences:
>Translated_213_residues MAQSDTPVRLDVWSDYVCPFCYLELPVLEQLHARLGSALDIHWRAFELRPVPARPLAPVSEPPRSAWARSVYPLAEQRGL TMRPPPVQPKSRLALEAAEFAKDAGSFSPFHEALFRAFFADGQDIGDLRVLGALAEDVGMDRESMTRALEAGRYTARVLA DEEEAQRLGIRGVPAMRLAGNGPVLLLTGAQPEEAVRAAFARVRPGPSLSAVH >Mature_212_residues AQSDTPVRLDVWSDYVCPFCYLELPVLEQLHARLGSALDIHWRAFELRPVPARPLAPVSEPPRSAWARSVYPLAEQRGLT MRPPPVQPKSRLALEAAEFAKDAGSFSPFHEALFRAFFADGQDIGDLRVLGALAEDVGMDRESMTRALEAGRYTARVLAD EEEAQRLGIRGVPAMRLAGNGPVLLLTGAQPEEAVRAAFARVRPGPSLSAVH
Specific function: Unknown
COG id: COG2761
COG function: function code Q; Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001853 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01323 DSBA [H]
EC number: NA
Molecular weight: Translated: 23321; Mature: 23190
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQSDTPVRLDVWSDYVCPFCYLELPVLEQLHARLGSALDIHWRAFELRPVPARPLAPVS CCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCCCCCCCC EPPRSAWARSVYPLAEQRGLTMRPPPVQPKSRLALEAAEFAKDAGSFSPFHEALFRAFFA CCCHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC DGQDIGDLRVLGALAEDVGMDRESMTRALEAGRYTARVLADEEEAQRLGIRGVPAMRLAG CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHEEECCCHHHHHHCCCCCCCCEEECC NGPVLLLTGAQPEEAVRAAFARVRPGPSLSAVH CCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AQSDTPVRLDVWSDYVCPFCYLELPVLEQLHARLGSALDIHWRAFELRPVPARPLAPVS CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCCCCCCCC EPPRSAWARSVYPLAEQRGLTMRPPPVQPKSRLALEAAEFAKDAGSFSPFHEALFRAFFA CCCHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC DGQDIGDLRVLGALAEDVGMDRESMTRALEAGRYTARVLADEEEAQRLGIRGVPAMRLAG CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHEEECCCHHHHHHCCCCCCCCEEECC NGPVLLLTGAQPEEAVRAAFARVRPGPSLSAVH CCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377 [H]