| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108760130
Identifier: 108760130
GI number: 108760130
Start: 3419101
End: 3420426
Strand: Direct
Name: 108760130
Synonym: MXAN_2919
Alternate gene names: NA
Gene position: 3419101-3420426 (Clockwise)
Preceding gene: 108760212
Following gene: 108759676
Centisome position: 37.41
GC content: 72.47
Gene sequence:
>1326_bases GTGTCCGCGCTCATGGGAACCGTGTCCGAGCTTCCGCTGGACCTGCGCTGGCGCCGCGCCATCAACGCCGTGCTCGTGCT GTGGACCGTGGGCCTGGTGCTGGCGGAGGTCGTCCTCCAGGTGGCGACGGGCGCGGCGGTGCTGCTGGCGGCGATTCTGC TGGTGCGAGGGCGGCTCCGCCTGGCGCCGGACGTGCGCGCCTATGTCGGGGCCAGTGGGGTGCTGTGCCTGTGGCAGGCG GCGTCGCCCGCCGTGGCGCTGCTGACGGGCGCGGCGGTGTCGTGGCCGCGCGGCGCGCGGTACGGCCAGGTGCTGGACTC GGTGGCGGGCGCCGCGGCCGCGTGCATTGGCGCCGTGGGCGTGCCGTGGCTGCTGCTGGCGGGCGTCCTCGCGGGAGGGT GGCTGCTGGCCGCGCTGCTGGGCGTGTTCCAGAACCGGGTGCGCTGGTCCGTGGAGCTGCCCTCCTTCCTCAAGCTCAAC CTGGGGCGACTGCACGAGAACTTCGGCACCGAGGAGTCTCCGCGCTACGCGGCGGGTGGCTTCTTCTCCCACCGGCTTCG CTTCGCGCACGGCGCCATCGCGGCGCTCGGGCCCGCGCTGTCGGTGCTGGGCAGCGCGGACCAGGCGCGGCGGCGCATCC TGGCGGGGGCGGTGGTGATGGGGATGCTCATCTCCATCTACAACGCCTTCGCGCGCGCGGCGCTGGGCGCGGCATTGCTC GTGAGCGTGGTGGCGTTGCTGCTGCTGGTCCAGGGCTCCGCGCGGAAGATGGGGTTGGCGCTCCTGTTCGCGCTGGTGGC CGTCGTCTCCATGAGCCCGGCCTGGCGCACGCGAATGGAGAAGGCGCTGGGCAACATCTACGGCGGAGAGCGCGAGCACG CCATGGCCGTGGGCTGGAGCCTGGTGCGTGAATACCCGCTGACGGGCGTGGGCTTCGGCAACCACAAGCCGGCCGCCCTG GCCACGCAGGACGAGACGGGCATCACCGACCTGCTGGCCACCGATTCGCACAACCTCTGGCTGACGGTGTGGGCGGAGAC GGGCCTGGTGGGGCTGTTGCTGATGCTGGCGATGCACGGCCTGCTGGGGCGCGCCCTCATCCGGCGCTACCGTCAGGGCT CCATCGCGGCCACGGGCGCCCTACTGTCCTGGGTGGGCTTCCACATCCTCGCGTTGGTGCACTACCTGCCGTTCCACTCC AGCGTGTACCTGTCCTTCTCGCTCATCTGGGGACTGGGGCTGTGCGAGGGCAGTGAACGCCTGCGCGGCCGGGAGGCCCG TCAGGGGCACCTGGAGATGGAAGGCGCGCCCGGGCCCACGCCCTAA
Upstream 100 bases:
>100_bases TGGACGCCCACCGTGCTGCTGGGCCTCATCGCGGGCGCCGTGTGGTTGCAGCGCGAGGGCCGGTTGCACCTGCCGCGGCG CTCGCTGCTGGTGAGATAGC
Downstream 100 bases:
>100_bases CGGCGAGGCGTCCCGCGCGAGCCTCCGGGCGCCGGGGCCTCCAGCACGCGGCGGTAGACGGCCAGGGTGCGCCGGGCACA GTCGTCCCAGGTGAAGCGCG
Product: O-antigen polymerase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MSALMGTVSELPLDLRWRRAINAVLVLWTVGLVLAEVVLQVATGAAVLLAAILLVRGRLRLAPDVRAYVGASGVLCLWQA ASPAVALLTGAAVSWPRGARYGQVLDSVAGAAAACIGAVGVPWLLLAGVLAGGWLLAALLGVFQNRVRWSVELPSFLKLN LGRLHENFGTEESPRYAAGGFFSHRLRFAHGAIAALGPALSVLGSADQARRRILAGAVVMGMLISIYNAFARAALGAALL VSVVALLLLVQGSARKMGLALLFALVAVVSMSPAWRTRMEKALGNIYGGEREHAMAVGWSLVREYPLTGVGFGNHKPAAL ATQDETGITDLLATDSHNLWLTVWAETGLVGLLLMLAMHGLLGRALIRRYRQGSIAATGALLSWVGFHILALVHYLPFHS SVYLSFSLIWGLGLCEGSERLRGREARQGHLEMEGAPGPTP
Sequences:
>Translated_441_residues MSALMGTVSELPLDLRWRRAINAVLVLWTVGLVLAEVVLQVATGAAVLLAAILLVRGRLRLAPDVRAYVGASGVLCLWQA ASPAVALLTGAAVSWPRGARYGQVLDSVAGAAAACIGAVGVPWLLLAGVLAGGWLLAALLGVFQNRVRWSVELPSFLKLN LGRLHENFGTEESPRYAAGGFFSHRLRFAHGAIAALGPALSVLGSADQARRRILAGAVVMGMLISIYNAFARAALGAALL VSVVALLLLVQGSARKMGLALLFALVAVVSMSPAWRTRMEKALGNIYGGEREHAMAVGWSLVREYPLTGVGFGNHKPAAL ATQDETGITDLLATDSHNLWLTVWAETGLVGLLLMLAMHGLLGRALIRRYRQGSIAATGALLSWVGFHILALVHYLPFHS SVYLSFSLIWGLGLCEGSERLRGREARQGHLEMEGAPGPTP >Mature_440_residues SALMGTVSELPLDLRWRRAINAVLVLWTVGLVLAEVVLQVATGAAVLLAAILLVRGRLRLAPDVRAYVGASGVLCLWQAA SPAVALLTGAAVSWPRGARYGQVLDSVAGAAAACIGAVGVPWLLLAGVLAGGWLLAALLGVFQNRVRWSVELPSFLKLNL GRLHENFGTEESPRYAAGGFFSHRLRFAHGAIAALGPALSVLGSADQARRRILAGAVVMGMLISIYNAFARAALGAALLV SVVALLLLVQGSARKMGLALLFALVAVVSMSPAWRTRMEKALGNIYGGEREHAMAVGWSLVREYPLTGVGFGNHKPAALA TQDETGITDLLATDSHNLWLTVWAETGLVGLLLMLAMHGLLGRALIRRYRQGSIAATGALLSWVGFHILALVHYLPFHSS VYLSFSLIWGLGLCEGSERLRGREARQGHLEMEGAPGPTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46685; Mature: 46553
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALMGTVSELPLDLRWRRAINAVLVLWTVGLVLAEVVLQVATGAAVLLAAILLVRGRLR CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC LAPDVRAYVGASGVLCLWQAASPAVALLTGAAVSWPRGARYGQVLDSVAGAAAACIGAVG CCCCHHHHHCCCCCEEEECCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VPWLLLAGVLAGGWLLAALLGVFQNRVRWSVELPSFLKLNLGRLHENFGTEESPRYAAGG HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCC FFSHRLRFAHGAIAALGPALSVLGSADQARRRILAGAVVMGMLISIYNAFARAALGAALL HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSVVALLLLVQGSARKMGLALLFALVAVVSMSPAWRTRMEKALGNIYGGEREHAMAVGWS HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH LVREYPLTGVGFGNHKPAALATQDETGITDLLATDSHNLWLTVWAETGLVGLLLMLAMHG HHHHCCCCCCCCCCCCCCEEECCCCCCCHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHH LLGRALIRRYRQGSIAATGALLSWVGFHILALVHYLPFHSSVYLSFSLIWGLGLCEGSER HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHH LRGREARQGHLEMEGAPGPTP HCCCHHHCCCEEECCCCCCCC >Mature Secondary Structure SALMGTVSELPLDLRWRRAINAVLVLWTVGLVLAEVVLQVATGAAVLLAAILLVRGRLR CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC LAPDVRAYVGASGVLCLWQAASPAVALLTGAAVSWPRGARYGQVLDSVAGAAAACIGAVG CCCCHHHHHCCCCCEEEECCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VPWLLLAGVLAGGWLLAALLGVFQNRVRWSVELPSFLKLNLGRLHENFGTEESPRYAAGG HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCC FFSHRLRFAHGAIAALGPALSVLGSADQARRRILAGAVVMGMLISIYNAFARAALGAALL HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSVVALLLLVQGSARKMGLALLFALVAVVSMSPAWRTRMEKALGNIYGGEREHAMAVGWS HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH LVREYPLTGVGFGNHKPAALATQDETGITDLLATDSHNLWLTVWAETGLVGLLLMLAMHG HHHHCCCCCCCCCCCCCCEEECCCCCCCHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHH LLGRALIRRYRQGSIAATGALLSWVGFHILALVHYLPFHSSVYLSFSLIWGLGLCEGSER HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHH LRGREARQGHLEMEGAPGPTP HCCCHHHCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA