| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is ydeN [C]
Identifier: 108760098
GI number: 108760098
Start: 3181925
End: 3183829
Strand: Direct
Name: ydeN [C]
Synonym: MXAN_2731
Alternate gene names: 108760098
Gene position: 3181925-3183829 (Clockwise)
Preceding gene: 108761966
Following gene: 108762826
Centisome position: 34.81
GC content: 72.39
Gene sequence:
>1905_bases ATGGTGCTGGCCGTAGCGGGGACATTGCTGGCGCGTGCCTGGGGACGGGGCGGCGCTTGGGCGACGTTGGGGCAGGGGCT GCTGTTATTCGTGCTGCTGGCGTGGGACCGGGCCATCGCGCGTCCGGCCCTCTTCGATGACCTGCCCGCGCTCCGGTTGC TGCTGGCCTGGCTGGTGGATCATGGCGAGCCCTGGCATCCCCGCGCGGTGCTGGCGGTCTGGCTGGTGTCGCACGCGGCG GTGTGGGTGGCGCGCACGCGGCAGTGGCGGCGTGCGGGATGGGCAGGCGCAGCGCTGGCGGGCGTGGCGGGGCTGCTGGT GGTGGGGAAGGGGATGGCTGGACGCGGCACGCCTGAGCATCCGCTGGTGGTCGTCATCGGCATCGACGCGTTCCGGCCGG ACCGGCTGAAGTCGCAGGGAGGCTCGGGCGAGGTGGCGCCCCATGTGGAGCGCCTGCTGGAGGAGGCCACGCTCTTCACC CGCGCGTACACGCCCATTGCCCAGACGGAGCCCGCGTGGCGTTCGCTGCTCACCGCGCGGTGGCCGCATGAGACGGGCGT GCGCTACTCGCTGACGTCCGACTCGCGGATGCAACTCCAGCGAACCTTCGCGGAGTCCTTCGCCCAGGCGGGGTGGCGCA CGGTGTTCGCCACCGACTGCTCGCGCTTCCACGCGGAGGGGCCCGCGTCCGGCTTCGAGACGCGCCTGCAGCCGCCGCGC GGGGCGGTGAACTTCCTCCTGGAGAAGCTGCGTTACCGCGCGCTGGGCATGTTCGCCGACCACGCGTTGGGCGCCGCCTG GTTGCCCGAGTTCATCGACAACCGCGCGCTGGCCGGTATCCATGACCCCATGGGCTACGCGGAGCGGCTGGCCTCACGGC TGGTGGACGAAGCGAGCGAGGGCCCCACGTTGTTCGCCTTCCACGCGACGGCGGCGCACTTCCCGGGCGACCCGGTGCAT CCGTTCTATCGCCGCTTCGTGCCCGCCTCGGAGCCGCTGGAGCGCCGGCTGCGCATGCACTTCGCCCCAGTGTCTCCAGG CGCGAAGGGCGGCTGGAACCGGGCGGGCGCGGAGGCGCTCTACGACGAGCTGATTGCGCAGGCGGACGCGCAGGTGGGGA CGCTGCTGGACGCGCTGCGCCGCTCAGGGCGCTATGACGATGCGCTCATCCTCCTGATGTCGGACCATGGCGAGAGCTTC CACGCGGACCGCGAGGACCTCGCGGGCGCCACGCCGGTGCATGGCGCGCGGCTGTCGGAGGAGGAGAACCGCATCCTCCT GGCGGTGAAGCCACCCAAGGGACGGGGGACGGCGCCAGCCCTGGTGGATTCGCTGGTGCGGCTCGTGGACGTGGGGCCCA CCCTGCTGGAGTTGTCCGAGCTGCCGAACCTGTCGGATGTGGACGGCGTGTCGCTGGCGCCGCTGCTGCGCGGCGAGGAC CTGGGGCCGCTGTCGCTGTACGCGGAGACGGGCTTTACCCATGTGCTGCCGGAGGTGTTCGACGCGGGGCACTGGCCGGG GGCGCCTCGCTCCTTCGATGCGTACCGCATCCGTCCGGATGGCGTGGTGGAGATGGGGCCCGCGGCCCACGCCCGCATCC TCCAGGAGAAGGACGTGGGTGCCTTCGACGGCCAGCGCTGGTGGGTGGACCGGCCCCAGGCCAACGGCACGTTGCTGCGC GCCTGCCAGGGCGACTGTGAAGGGCCGGACGCCCTCGCGCTGGAGGCGTGGTTCGACCGCGTGCAGGGGCGGACGGTGGC GGGAGGCTGGCGTAAGGTGGCCGGCCATGTCGACGACTCCGGACACCCCGAGCCTTCAGGAACGCTACGCGCCCCAAAAC AGCTGCTTCGGCTGCGGCCCGGCCAACGCCCAGGGCCTGCGCATCCGCAGCCGCGTGGAGGGTGA
Upstream 100 bases:
>100_bases CATCCCGGTGGATGGCCCCTACGCCGCGTTGATGGCGGCCGTGCGGCCTGTCCTCCCTGGCCTGCTGTTGCGAGTCGCTG CCGTGTACGCCGTGGCCGGC
Downstream 100 bases:
>100_bases TGCCGTCGTCGCGGAGTGGACGCCGCAAGAGCACCACCACGCCTTCGAGGGCGTGCTCAGCGGCGGCATCGTCGGCACGC TGCTGGACTGTCACTGCAAC
Product: sulfatase domain-containing protein
Products: NA
Alternate protein names: Arylsulfatase; Choline-Sulfatase; Sulfatase Domain Protein; Phosphonate Monoester Hydrolase; Sulfatase Domain-Containing Protein
Number of amino acids: Translated: 634; Mature: 634
Protein sequence:
>634_residues MVLAVAGTLLARAWGRGGAWATLGQGLLLFVLLAWDRAIARPALFDDLPALRLLLAWLVDHGEPWHPRAVLAVWLVSHAA VWVARTRQWRRAGWAGAALAGVAGLLVVGKGMAGRGTPEHPLVVVIGIDAFRPDRLKSQGGSGEVAPHVERLLEEATLFT RAYTPIAQTEPAWRSLLTARWPHETGVRYSLTSDSRMQLQRTFAESFAQAGWRTVFATDCSRFHAEGPASGFETRLQPPR GAVNFLLEKLRYRALGMFADHALGAAWLPEFIDNRALAGIHDPMGYAERLASRLVDEASEGPTLFAFHATAAHFPGDPVH PFYRRFVPASEPLERRLRMHFAPVSPGAKGGWNRAGAEALYDELIAQADAQVGTLLDALRRSGRYDDALILLMSDHGESF HADREDLAGATPVHGARLSEEENRILLAVKPPKGRGTAPALVDSLVRLVDVGPTLLELSELPNLSDVDGVSLAPLLRGED LGPLSLYAETGFTHVLPEVFDAGHWPGAPRSFDAYRIRPDGVVEMGPAAHARILQEKDVGAFDGQRWWVDRPQANGTLLR ACQGDCEGPDALALEAWFDRVQGRTVAGGWRKVAGHVDDSGHPEPSGTLRAPKQLLRLRPGQRPGPAHPQPRGG
Sequences:
>Translated_634_residues MVLAVAGTLLARAWGRGGAWATLGQGLLLFVLLAWDRAIARPALFDDLPALRLLLAWLVDHGEPWHPRAVLAVWLVSHAA VWVARTRQWRRAGWAGAALAGVAGLLVVGKGMAGRGTPEHPLVVVIGIDAFRPDRLKSQGGSGEVAPHVERLLEEATLFT RAYTPIAQTEPAWRSLLTARWPHETGVRYSLTSDSRMQLQRTFAESFAQAGWRTVFATDCSRFHAEGPASGFETRLQPPR GAVNFLLEKLRYRALGMFADHALGAAWLPEFIDNRALAGIHDPMGYAERLASRLVDEASEGPTLFAFHATAAHFPGDPVH PFYRRFVPASEPLERRLRMHFAPVSPGAKGGWNRAGAEALYDELIAQADAQVGTLLDALRRSGRYDDALILLMSDHGESF HADREDLAGATPVHGARLSEEENRILLAVKPPKGRGTAPALVDSLVRLVDVGPTLLELSELPNLSDVDGVSLAPLLRGED LGPLSLYAETGFTHVLPEVFDAGHWPGAPRSFDAYRIRPDGVVEMGPAAHARILQEKDVGAFDGQRWWVDRPQANGTLLR ACQGDCEGPDALALEAWFDRVQGRTVAGGWRKVAGHVDDSGHPEPSGTLRAPKQLLRLRPGQRPGPAHPQPRGG >Mature_634_residues MVLAVAGTLLARAWGRGGAWATLGQGLLLFVLLAWDRAIARPALFDDLPALRLLLAWLVDHGEPWHPRAVLAVWLVSHAA VWVARTRQWRRAGWAGAALAGVAGLLVVGKGMAGRGTPEHPLVVVIGIDAFRPDRLKSQGGSGEVAPHVERLLEEATLFT RAYTPIAQTEPAWRSLLTARWPHETGVRYSLTSDSRMQLQRTFAESFAQAGWRTVFATDCSRFHAEGPASGFETRLQPPR GAVNFLLEKLRYRALGMFADHALGAAWLPEFIDNRALAGIHDPMGYAERLASRLVDEASEGPTLFAFHATAAHFPGDPVH PFYRRFVPASEPLERRLRMHFAPVSPGAKGGWNRAGAEALYDELIAQADAQVGTLLDALRRSGRYDDALILLMSDHGESF HADREDLAGATPVHGARLSEEENRILLAVKPPKGRGTAPALVDSLVRLVDVGPTLLELSELPNLSDVDGVSLAPLLRGED LGPLSLYAETGFTHVLPEVFDAGHWPGAPRSFDAYRIRPDGVVEMGPAAHARILQEKDVGAFDGQRWWVDRPQANGTLLR ACQGDCEGPDALALEAWFDRVQGRTVAGGWRKVAGHVDDSGHPEPSGTLRAPKQLLRLRPGQRPGPAHPQPRGG
Specific function: Unknown
COG id: COG3119
COG function: function code P; Arylsulfatase A and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.6.- [C]
Molecular weight: Translated: 68938; Mature: 68938
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLAVAGTLLARAWGRGGAWATLGQGLLLFVLLAWDRAIARPALFDDLPALRLLLAWLVD CEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHH HGEPWHPRAVLAVWLVSHAAVWVARTRQWRRAGWAGAALAGVAGLLVVGKGMAGRGTPEH CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCC PLVVVIGIDAFRPDRLKSQGGSGEVAPHVERLLEEATLFTRAYTPIAQTEPAWRSLLTAR CEEEEEECCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHC WPHETGVRYSLTSDSRMQLQRTFAESFAQAGWRTVFATDCSRFHAEGPASGFETRLQPPR CCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCCCCCCCCCCCCCC GAVNFLLEKLRYRALGMFADHALGAAWLPEFIDNRALAGIHDPMGYAERLASRLVDEASE HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCC GPTLFAFHATAAHFPGDPVHPFYRRFVPASEPLERRLRMHFAPVSPGAKGGWNRAGAEAL CCEEEEEECCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHH YDELIAQADAQVGTLLDALRRSGRYDDALILLMSDHGESFHADREDLAGATPVHGARLSE HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCC EENRILLAVKPPKGRGTAPALVDSLVRLVDVGPTLLELSELPNLSDVDGVSLAPLLRGED CCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHCCCC LGPLSLYAETGFTHVLPEVFDAGHWPGAPRSFDAYRIRPDGVVEMGPAAHARILQEKDVG CCCEEEEHHCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCEECCCHHHHHHHHHCCCC AFDGQRWWVDRPQANGTLLRACQGDCEGPDALALEAWFDRVQGRTVAGGWRKVAGHVDDS CCCCCEEECCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCEECCCHHHHHCCCCCC GHPEPSGTLRAPKQLLRLRPGQRPGPAHPQPRGG CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVLAVAGTLLARAWGRGGAWATLGQGLLLFVLLAWDRAIARPALFDDLPALRLLLAWLVD CEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHH HGEPWHPRAVLAVWLVSHAAVWVARTRQWRRAGWAGAALAGVAGLLVVGKGMAGRGTPEH CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCC PLVVVIGIDAFRPDRLKSQGGSGEVAPHVERLLEEATLFTRAYTPIAQTEPAWRSLLTAR CEEEEEECCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHC WPHETGVRYSLTSDSRMQLQRTFAESFAQAGWRTVFATDCSRFHAEGPASGFETRLQPPR CCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCCCCCCCCCCCCCC GAVNFLLEKLRYRALGMFADHALGAAWLPEFIDNRALAGIHDPMGYAERLASRLVDEASE HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCC GPTLFAFHATAAHFPGDPVHPFYRRFVPASEPLERRLRMHFAPVSPGAKGGWNRAGAEAL CCEEEEEECCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHH YDELIAQADAQVGTLLDALRRSGRYDDALILLMSDHGESFHADREDLAGATPVHGARLSE HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCC EENRILLAVKPPKGRGTAPALVDSLVRLVDVGPTLLELSELPNLSDVDGVSLAPLLRGED CCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHCCCC LGPLSLYAETGFTHVLPEVFDAGHWPGAPRSFDAYRIRPDGVVEMGPAAHARILQEKDVG CCCEEEEHHCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCEECCCHHHHHHHHHCCCC AFDGQRWWVDRPQANGTLLRACQGDCEGPDALALEAWFDRVQGRTVAGGWRKVAGHVDDS CCCCCEEECCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCEECCCHHHHHCCCCCC GHPEPSGTLRAPKQLLRLRPGQRPGPAHPQPRGG CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA