| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108760066
Identifier: 108760066
GI number: 108760066
Start: 3545048
End: 3545932
Strand: Direct
Name: 108760066
Synonym: MXAN_3017
Alternate gene names: NA
Gene position: 3545048-3545932 (Clockwise)
Preceding gene: 108762135
Following gene: 108760242
Centisome position: 38.79
GC content: 71.3
Gene sequence:
>885_bases ATGAGCAGCCAGCGCGCGAACCAGCTCATCGAGGCAGGACTGTGGCTGCGCCTCAGTGGCGACGCCCAGGGAGCGCAGCG GCTCTTCGAGCGCGCGCTGGAGCTGGATCCGGCCAACACCCGCGCCCGGGAGTACCTGGCGGCCGCCGCGGGCGCGCCTT CGCGGGGCACGGCGACGCCGTTCGAGCGGCCTCCGGAGTTGGAGCCTTCGCTGGGGCGGCTGGCGCCCACCGACGCGGAC CTGCCCGTCTCACCGGCGCTGGAAGGCGACTGGGGCGCATGGGCGGAAGGACAGGGCGGCCCCTCGGAGGCCGGTGGCAA GTCGCCGCCCGCGCCCGTCGTCCTTCCGGAGGCGCTGGACGGCGCGCCGGCGGACGTGCTGGAGCTGCTGGCGCGTGACG TGGTCATCGAATTCGACGAGCCCGTCCTCCAGGCGAAGGGGGACACCGACGAGTACGGCATCCCCGCAGGCCACACCCAG GAGTTCGACCTCCCCGTGATGGAGAGCGAGCTGGACCTGCTCCTGCGCGGGGCCGAGGACCTGCTGGAACTGGATGACCA CTCCGGCGCGGTGGACCTGCTCTTCAAGGCGAAGGAGCTGGCGCCGTCGGACATCCGCGTGGAGTCGCTGCGCGCGCGCA GTGAGCGGATGCTGATGGGCCGGCTGGAGTCCAAGCTGGGCGACCTGGGCCGGGTGCCCGCGGTGCGCCTGCAGCCGGAC GACATCATCTGGCTCAACCTGGACCACCGCGCCGGCTTCGTGCTGGCGCAGATTGACGGTTCGGTGAGCTACGAAGACCT CTTCTCGCTGTCGGGGATGACGCGGCTGGATACCGCGCGCATCCTCGTCCAGCTCATTGATGAAGGCGTCATTTCCGCGG GCTGA
Upstream 100 bases:
>100_bases CGCGGGCGAGGACGTGGCGGCGCTGGGCCGCGCGTGTGAACTGCTCACGGGGTGCCTGGCGCAGCTCAAGGGCCCGGCGC CCGGCGGCACGGGGCGGTAG
Downstream 100 bases:
>100_bases CGGCTAGCCGCGGATGATGGCCGTCCACGTGCCCTTCACCACCAGGGTGCCGTGCTGGTTGCGCGACTCACTGGTGACGA TGACGAAGCCCATTCGGGCG
Product: TPR domain-containing protein
Products: NA
Alternate protein names: TPR Domain-Containing Protein
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MSSQRANQLIEAGLWLRLSGDAQGAQRLFERALELDPANTRAREYLAAAAGAPSRGTATPFERPPELEPSLGRLAPTDAD LPVSPALEGDWGAWAEGQGGPSEAGGKSPPAPVVLPEALDGAPADVLELLARDVVIEFDEPVLQAKGDTDEYGIPAGHTQ EFDLPVMESELDLLLRGAEDLLELDDHSGAVDLLFKAKELAPSDIRVESLRARSERMLMGRLESKLGDLGRVPAVRLQPD DIIWLNLDHRAGFVLAQIDGSVSYEDLFSLSGMTRLDTARILVQLIDEGVISAG
Sequences:
>Translated_294_residues MSSQRANQLIEAGLWLRLSGDAQGAQRLFERALELDPANTRAREYLAAAAGAPSRGTATPFERPPELEPSLGRLAPTDAD LPVSPALEGDWGAWAEGQGGPSEAGGKSPPAPVVLPEALDGAPADVLELLARDVVIEFDEPVLQAKGDTDEYGIPAGHTQ EFDLPVMESELDLLLRGAEDLLELDDHSGAVDLLFKAKELAPSDIRVESLRARSERMLMGRLESKLGDLGRVPAVRLQPD DIIWLNLDHRAGFVLAQIDGSVSYEDLFSLSGMTRLDTARILVQLIDEGVISAG >Mature_293_residues SSQRANQLIEAGLWLRLSGDAQGAQRLFERALELDPANTRAREYLAAAAGAPSRGTATPFERPPELEPSLGRLAPTDADL PVSPALEGDWGAWAEGQGGPSEAGGKSPPAPVVLPEALDGAPADVLELLARDVVIEFDEPVLQAKGDTDEYGIPAGHTQE FDLPVMESELDLLLRGAEDLLELDDHSGAVDLLFKAKELAPSDIRVESLRARSERMLMGRLESKLGDLGRVPAVRLQPDD IIWLNLDHRAGFVLAQIDGSVSYEDLFSLSGMTRLDTARILVQLIDEGVISAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31543; Mature: 31412
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSQRANQLIEAGLWLRLSGDAQGAQRLFERALELDPANTRAREYLAAAAGAPSRGTATP CCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCC FERPPELEPSLGRLAPTDADLPVSPALEGDWGAWAEGQGGPSEAGGKSPPAPVVLPEALD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC GAPADVLELLARDVVIEFDEPVLQAKGDTDEYGIPAGHTQEFDLPVMESELDLLLRGAED CCHHHHHHHHHHHHEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHH LLELDDHSGAVDLLFKAKELAPSDIRVESLRARSERMLMGRLESKLGDLGRVPAVRLQPD HHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC DIIWLNLDHRAGFVLAQIDGSVSYEDLFSLSGMTRLDTARILVQLIDEGVISAG CEEEEEECCCCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SSQRANQLIEAGLWLRLSGDAQGAQRLFERALELDPANTRAREYLAAAAGAPSRGTATP CHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCC FERPPELEPSLGRLAPTDADLPVSPALEGDWGAWAEGQGGPSEAGGKSPPAPVVLPEALD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC GAPADVLELLARDVVIEFDEPVLQAKGDTDEYGIPAGHTQEFDLPVMESELDLLLRGAED CCHHHHHHHHHHHHEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHH LLELDDHSGAVDLLFKAKELAPSDIRVESLRARSERMLMGRLESKLGDLGRVPAVRLQPD HHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC DIIWLNLDHRAGFVLAQIDGSVSYEDLFSLSGMTRLDTARILVQLIDEGVISAG CEEEEEECCCCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA