| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108760003
Identifier: 108760003
GI number: 108760003
Start: 5250930
End: 5252258
Strand: Direct
Name: 108760003
Synonym: MXAN_4286
Alternate gene names: NA
Gene position: 5250930-5252258 (Clockwise)
Preceding gene: 108759183
Following gene: 108762712
Centisome position: 57.45
GC content: 66.29
Gene sequence:
>1329_bases ATGCCCACCTTGGAAATCGCGACCCGCTTCGACTGGGACACCTTCGTCAGGCGCTACTGGAACCAGCGCCCCGTGCTCTT CAAGGGAACACAGGCCTCCCCCTTCACCGTCGACGACGTCTTCGAGGCATCGGCCGGCGCCACCCAGCGCTACCTGTCCC GCAGCTACGAGCCGGCGTCACGGCCCGACGTCACCTTCACGGTGGACCGGCTGCGGCAGCTCCGCTCCCGGGAGTGGCTG CCCAGAAAGTCCGATGGCTCCCTGGACGGGTATGACGCCCGCATCGCCTCGCAACTGGGCGAGCGCCGCTACGCCCTCAT CATCGCCACGATGCACGCCTCCGGCTTCCAGCTCTGGTCACGGCAACGCGCCTTCTTCTCCGGCCTGTGGCAGCGCGTGG GCATGCCCGTGACGGGCGGCATCACCTCGCTGTTCCATGGGACCTACGAGCACAGCCCCGTGGGAGTCCACCTGGACCGC TTCACCACGTTCATGTTCGCGCTGCGCGGACGCAAGCGGATGCGCTTCTGGCACAAGCGGCCGTGGAGCGAGGACGTCTC CACCATCCTGGACTACCAGCCCTACCTGGCGTCGTCCTTCGTCGCGGAGGTCGAGCCCGGCGACATCCTCTACTGGCCCT CCACGTACTACCACGTGGGCGAGAGCGCCGGCGCAGGCGTGGCCAGCAGCCTGAATGTCGGCATCCCCATCACCGAGCAC CACGTCATCTATTCCGTGGACGACCTGCTGCGCGGGATGCTCGACGAGACGTCGCTCGCCGACCAGGAGTGGAAGCAGAC GCGGCTCGCGCGGGTATCGGCCTCGCCCCTGGCCCGCGGTGCCCTCTCGAAGAACGGTGTCCTGGCCACGGAGCTGCCCC GGGCGCTCACCGAAGCCGTGCGCGCGTTTCGCGATGTCAGCCACCCGAAAGAGGCGCGACGGCACATCCAATCCACCTGG CTCAAGCGGTTGACCTCGGGAGGCTTCGAGCCCGTGCCACCGCCCACCCGTGAAAAGCCTTTGCGTGACTCACACCACGT GCGGGTGGACCCGAGCTTCCCCGTCCTCTTCGAACGAGACAGCGCCACACGGTGGATTTGTTCCGCCAACGGCCATGCCC TGCGCGGCGCGGGTGGTGGACGCGCCATTGAAATATTCTTCCGAAAGCTGAACTCCGGCGCGGCTGTAAGCGTCGAGGAG TTGCTGAGCCCGTTTGGGACACGGCGCGCTGCGAGACATGATTCAGAAGTCATCGCCGCAACGCGTGAAGGAATGCGTGG CGTCCTGAAAAAACTTCACGCAGTTCGCGCAATCACTCTCAGCGCTTGA
Upstream 100 bases:
>100_bases GGCTCGCCCCGGTCCGCAGCGAGAGGCCAGTCGCGCCACGCTGGCGGCGCTCCTCCGGCTGCGCGGGATTCACGTCATCA CCGGAGCGGAGGCCTGACGG
Downstream 100 bases:
>100_bases CGCATCCGCCGTCAGCGCCCAGGCTTGGCCAGCAGTCCACATCCATCGATGGAGGAGTGTCATGACGAAGACGAAGGCGA AGGCCCCCCAATCGTCCAAG
Product: cupin family protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MPTLEIATRFDWDTFVRRYWNQRPVLFKGTQASPFTVDDVFEASAGATQRYLSRSYEPASRPDVTFTVDRLRQLRSREWL PRKSDGSLDGYDARIASQLGERRYALIIATMHASGFQLWSRQRAFFSGLWQRVGMPVTGGITSLFHGTYEHSPVGVHLDR FTTFMFALRGRKRMRFWHKRPWSEDVSTILDYQPYLASSFVAEVEPGDILYWPSTYYHVGESAGAGVASSLNVGIPITEH HVIYSVDDLLRGMLDETSLADQEWKQTRLARVSASPLARGALSKNGVLATELPRALTEAVRAFRDVSHPKEARRHIQSTW LKRLTSGGFEPVPPPTREKPLRDSHHVRVDPSFPVLFERDSATRWICSANGHALRGAGGGRAIEIFFRKLNSGAAVSVEE LLSPFGTRRAARHDSEVIAATREGMRGVLKKLHAVRAITLSA
Sequences:
>Translated_442_residues MPTLEIATRFDWDTFVRRYWNQRPVLFKGTQASPFTVDDVFEASAGATQRYLSRSYEPASRPDVTFTVDRLRQLRSREWL PRKSDGSLDGYDARIASQLGERRYALIIATMHASGFQLWSRQRAFFSGLWQRVGMPVTGGITSLFHGTYEHSPVGVHLDR FTTFMFALRGRKRMRFWHKRPWSEDVSTILDYQPYLASSFVAEVEPGDILYWPSTYYHVGESAGAGVASSLNVGIPITEH HVIYSVDDLLRGMLDETSLADQEWKQTRLARVSASPLARGALSKNGVLATELPRALTEAVRAFRDVSHPKEARRHIQSTW LKRLTSGGFEPVPPPTREKPLRDSHHVRVDPSFPVLFERDSATRWICSANGHALRGAGGGRAIEIFFRKLNSGAAVSVEE LLSPFGTRRAARHDSEVIAATREGMRGVLKKLHAVRAITLSA >Mature_441_residues PTLEIATRFDWDTFVRRYWNQRPVLFKGTQASPFTVDDVFEASAGATQRYLSRSYEPASRPDVTFTVDRLRQLRSREWLP RKSDGSLDGYDARIASQLGERRYALIIATMHASGFQLWSRQRAFFSGLWQRVGMPVTGGITSLFHGTYEHSPVGVHLDRF TTFMFALRGRKRMRFWHKRPWSEDVSTILDYQPYLASSFVAEVEPGDILYWPSTYYHVGESAGAGVASSLNVGIPITEHH VIYSVDDLLRGMLDETSLADQEWKQTRLARVSASPLARGALSKNGVLATELPRALTEAVRAFRDVSHPKEARRHIQSTWL KRLTSGGFEPVPPPTREKPLRDSHHVRVDPSFPVLFERDSATRWICSANGHALRGAGGGRAIEIFFRKLNSGAAVSVEEL LSPFGTRRAARHDSEVIAATREGMRGVLKKLHAVRAITLSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49781; Mature: 49650
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLEIATRFDWDTFVRRYWNQRPVLFKGTQASPFTVDDVFEASAGATQRYLSRSYEPAS CCCCHHEECCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCCCHHHHHHHCCCCCCC RPDVTFTVDRLRQLRSREWLPRKSDGSLDGYDARIASQLGERRYALIIATMHASGFQLWS CCCCEEEHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCHHHHHH RQRAFFSGLWQRVGMPVTGGITSLFHGTYEHSPVGVHLDRFTTFMFALRGRKRMRFWHKR HHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCEEEHHHHHHHHHHHHCCHHHHHHHCC PWSEDVSTILDYQPYLASSFVAEVEPGDILYWPSTYYHVGESAGAGVASSLNVGIPITEH CCHHHHHHHHCCCHHHHHHHHHCCCCCCEEECCCCCEECCCCCCCCCCCCCCCCCCCCCC HVIYSVDDLLRGMLDETSLADQEWKQTRLARVSASPLARGALSKNGVLATELPRALTEAV EEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHCCCCCCCEEHHHHHHHHHHHH RAFRDVSHPKEARRHIQSTWLKRLTSGGFEPVPPPTREKPLRDSHHVRVDPSFPVLFERD HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECC SATRWICSANGHALRGAGGGRAIEIFFRKLNSGAAVSVEELLSPFGTRRAARHDSEVIAA CCCEEEECCCCCEEECCCCCHHHHHHHHHHCCCCEEEHHHHHCHHHHHHHHHCCHHHHHH TREGMRGVLKKLHAVRAITLSA HHHHHHHHHHHHHHHHHEEECC >Mature Secondary Structure PTLEIATRFDWDTFVRRYWNQRPVLFKGTQASPFTVDDVFEASAGATQRYLSRSYEPAS CCCHHEECCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCCCHHHHHHHCCCCCCC RPDVTFTVDRLRQLRSREWLPRKSDGSLDGYDARIASQLGERRYALIIATMHASGFQLWS CCCCEEEHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCHHHHHH RQRAFFSGLWQRVGMPVTGGITSLFHGTYEHSPVGVHLDRFTTFMFALRGRKRMRFWHKR HHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCEEEHHHHHHHHHHHHCCHHHHHHHCC PWSEDVSTILDYQPYLASSFVAEVEPGDILYWPSTYYHVGESAGAGVASSLNVGIPITEH CCHHHHHHHHCCCHHHHHHHHHCCCCCCEEECCCCCEECCCCCCCCCCCCCCCCCCCCCC HVIYSVDDLLRGMLDETSLADQEWKQTRLARVSASPLARGALSKNGVLATELPRALTEAV EEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHCCCCCCCEEHHHHHHHHHHHH RAFRDVSHPKEARRHIQSTWLKRLTSGGFEPVPPPTREKPLRDSHHVRVDPSFPVLFERD HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECC SATRWICSANGHALRGAGGGRAIEIFFRKLNSGAAVSVEELLSPFGTRRAARHDSEVIAA CCCEEEECCCCCEEECCCCCHHHHHHHHHHCCCCEEEHHHHHCHHHHHHHHHCCHHHHHH TREGMRGVLKKLHAVRAITLSA HHHHHHHHHHHHHHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA