| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108759973
Identifier: 108759973
GI number: 108759973
Start: 5780056
End: 5782026
Strand: Reverse
Name: 108759973
Synonym: MXAN_4606
Alternate gene names: NA
Gene position: 5782026-5780056 (Counterclockwise)
Preceding gene: 108758945
Following gene: 108758709
Centisome position: 63.26
GC content: 66.82
Gene sequence:
>1971_bases ATGAAGCGCATGACGACATGGAAGCGGACGTTTCTGCTGCACGCCACGTGGGCGCTCCTGTGGGGCACCCCGGCGGCGGC CGTAACGCCGTCGAACGTGACGAAGGTCTCCCGGGTGACGGGCGCGACGCCCGCCGGTGAGCTGCTGCCGAACCCGAACC AGACGCACACGAACCACGACGTCCATGGGACGGACCTGGGCATCGTCTGGGACAAGGGCGGTGGCGAGGTGTTCGTCCTG TTCGGGGACACCTTCGGCGCGGGCTGGTGTGGCAATGGTGGCTGTGGGGGCGGCTGGCGCAGCAACGTCTTGGCGCGTTC GTCCGATACGAACCTGGCCAACGGCTTGTCCTTCTCCTCCATGATTCAGGACGGGCCTCGGCATGCGAAGGAGATCCTCG CGTCCCGGAAGGTCAACTTCGACGAAATCACCGTCATCCCCACCGCGGGCGTCACCATCGGCTCGCGGCACTACATCCAC TACATGTCCATCCACCACTGGGGGGAGGCGGGCATGTGGTTCACGAACCACGCGGGCATCGCGTACTCGGATGACCAGGG GCAGAACTGGGTGAAGCACCCGACGGCGCGTTGGCAGAACACGCCGGCCTGGACGAACAACTTCCAGATGGCGGCCTTCG TCAGGAACGGCGGGTTCGTCTACATGTACGCGACGCCGAACGGCCGCTTCGGCAACGTCCACCTGGCCCGCGTGCCGGAG ACGGCGCTGCTGGACATCAACGGCTACCGCTACTGGGATGGAAACGGATGGAGCGTGTCGCAGGCGGCGGCGCGGCCCGT CGCCATTGGTATCGCGGGTGAGTTGTCCGTCTCGTATCACGCGCCGCTCGGGCGCTTCCTGATGACGTACCTGAACGAGC ACCGGCAGGCGGTGGTGATGCGTGACGCCGCCACGCCCACGGGGCCCTGGAGCGGAGAGAAGGTGCTCGCCAGTGGAGCC GTGTACCCGGGCCTCTACAACGCGTTCATCCACCCCTGGGGCAACACCGGAAACTCGCTGTACTTCGTCATGTCCCAGTG GACGCCGTACAACACCTTCCTCATGCGGGCCACGCTGGCCCACGACGCGCACAGCGACAACCTGCTCTCCGAGCCTGGCT TCGAGACACAGGCGGCCACGCCGGTGATGGCGCCCTGGTATCTGCAAGGCTCGGGCGGCGTGGACCGGGCGCTCGGCAAC GCGCGCAGTGGGCAGGACAACGGCTTCGTGAACGCGAGCAGCGGGTGGAATGCGCTCAAGCAGAGCGTCGTCGTCCAGCC TTACACGGACTACACGCTGCGCGGCTGGGTCCGCAGCTCCGCCAACAACACCGCGGGCTACTTCGGGGCTCGCGGGCCGG GCAATGGCCCCATCCTGGGCGAGGTGCCCTTCGGCGCGCTGGGGGCCTACACGGAGCGGGTGGTCCACTTCAACTCCGGG CCGAACGCGCTCATCGAGGTGTATGGCGGCCTCTGGGCCGACAACGTTGATACCTGGATGCAGCTCGATGACGTCAGCCT GACGCGTGGGAGCAATCTCATCCACCAGGCGGGCTTCGAGCAGCAGTCCACGAACAACGCCACGTCGCCCTGGTACACCG AAGGCAGGGCGGGCATTGACCGGGGACTCGGCTATGCGCGCACGGGCGCCAACAACGCCTGGGCGCGGAACGACACGGGG TGGAATGCCGTGAAGCAGGAGGTCGCGGTGACGCCGAACACCCAGTACACGCTGACGGGCTGGGTGAAGACGTCCACGAA CCACGCGGATGGCTACTTCGGCGCGCGGCTGCTCCGGAGCGGGCCCATCCTCAACGAGGTGCGTTTCGCCCAGCCGCTGG GCAACTACACGCAGTTGTCGGTGTCGTTCAACTCCGGCGCCCAGCACAGCGTGGAGGTGTTCGCGGGAATGTGGGCGAAC ACCGGCGACACCTGGATTCAGGTGGATGACCTGACGCTGACGCGGAACTGA
Upstream 100 bases:
>100_bases TCCGGTCGTCCGTCGCGCCTTGATTTAAAGGTTAATCGCGTTATGCGACTAGAGTCGCCTCTCCCGTCCGGGTTGCACCG TGACAACCAGAGAGGTGGCC
Downstream 100 bases:
>100_bases GGCCCCTTACCGCGAAGGCGGGGACACGGCCCCGGTGAAGGGGGGGCCTGGTGGCATCTCCTCGACTTCGCGGACGTGGC GGGCGGTATAGCCCCGCACC
Product: carbohydrate-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 656; Mature: 656
Protein sequence:
>656_residues MKRMTTWKRTFLLHATWALLWGTPAAAVTPSNVTKVSRVTGATPAGELLPNPNQTHTNHDVHGTDLGIVWDKGGGEVFVL FGDTFGAGWCGNGGCGGGWRSNVLARSSDTNLANGLSFSSMIQDGPRHAKEILASRKVNFDEITVIPTAGVTIGSRHYIH YMSIHHWGEAGMWFTNHAGIAYSDDQGQNWVKHPTARWQNTPAWTNNFQMAAFVRNGGFVYMYATPNGRFGNVHLARVPE TALLDINGYRYWDGNGWSVSQAAARPVAIGIAGELSVSYHAPLGRFLMTYLNEHRQAVVMRDAATPTGPWSGEKVLASGA VYPGLYNAFIHPWGNTGNSLYFVMSQWTPYNTFLMRATLAHDAHSDNLLSEPGFETQAATPVMAPWYLQGSGGVDRALGN ARSGQDNGFVNASSGWNALKQSVVVQPYTDYTLRGWVRSSANNTAGYFGARGPGNGPILGEVPFGALGAYTERVVHFNSG PNALIEVYGGLWADNVDTWMQLDDVSLTRGSNLIHQAGFEQQSTNNATSPWYTEGRAGIDRGLGYARTGANNAWARNDTG WNAVKQEVAVTPNTQYTLTGWVKTSTNHADGYFGARLLRSGPILNEVRFAQPLGNYTQLSVSFNSGAQHSVEVFAGMWAN TGDTWIQVDDLTLTRN
Sequences:
>Translated_656_residues MKRMTTWKRTFLLHATWALLWGTPAAAVTPSNVTKVSRVTGATPAGELLPNPNQTHTNHDVHGTDLGIVWDKGGGEVFVL FGDTFGAGWCGNGGCGGGWRSNVLARSSDTNLANGLSFSSMIQDGPRHAKEILASRKVNFDEITVIPTAGVTIGSRHYIH YMSIHHWGEAGMWFTNHAGIAYSDDQGQNWVKHPTARWQNTPAWTNNFQMAAFVRNGGFVYMYATPNGRFGNVHLARVPE TALLDINGYRYWDGNGWSVSQAAARPVAIGIAGELSVSYHAPLGRFLMTYLNEHRQAVVMRDAATPTGPWSGEKVLASGA VYPGLYNAFIHPWGNTGNSLYFVMSQWTPYNTFLMRATLAHDAHSDNLLSEPGFETQAATPVMAPWYLQGSGGVDRALGN ARSGQDNGFVNASSGWNALKQSVVVQPYTDYTLRGWVRSSANNTAGYFGARGPGNGPILGEVPFGALGAYTERVVHFNSG PNALIEVYGGLWADNVDTWMQLDDVSLTRGSNLIHQAGFEQQSTNNATSPWYTEGRAGIDRGLGYARTGANNAWARNDTG WNAVKQEVAVTPNTQYTLTGWVKTSTNHADGYFGARLLRSGPILNEVRFAQPLGNYTQLSVSFNSGAQHSVEVFAGMWAN TGDTWIQVDDLTLTRN >Mature_656_residues MKRMTTWKRTFLLHATWALLWGTPAAAVTPSNVTKVSRVTGATPAGELLPNPNQTHTNHDVHGTDLGIVWDKGGGEVFVL FGDTFGAGWCGNGGCGGGWRSNVLARSSDTNLANGLSFSSMIQDGPRHAKEILASRKVNFDEITVIPTAGVTIGSRHYIH YMSIHHWGEAGMWFTNHAGIAYSDDQGQNWVKHPTARWQNTPAWTNNFQMAAFVRNGGFVYMYATPNGRFGNVHLARVPE TALLDINGYRYWDGNGWSVSQAAARPVAIGIAGELSVSYHAPLGRFLMTYLNEHRQAVVMRDAATPTGPWSGEKVLASGA VYPGLYNAFIHPWGNTGNSLYFVMSQWTPYNTFLMRATLAHDAHSDNLLSEPGFETQAATPVMAPWYLQGSGGVDRALGN ARSGQDNGFVNASSGWNALKQSVVVQPYTDYTLRGWVRSSANNTAGYFGARGPGNGPILGEVPFGALGAYTERVVHFNSG PNALIEVYGGLWADNVDTWMQLDDVSLTRGSNLIHQAGFEQQSTNNATSPWYTEGRAGIDRGLGYARTGANNAWARNDTG WNAVKQEVAVTPNTQYTLTGWVKTSTNHADGYFGARLLRSGPILNEVRFAQPLGNYTQLSVSFNSGAQHSVEVFAGMWAN TGDTWIQVDDLTLTRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71382; Mature: 71382
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRMTTWKRTFLLHATWALLWGTPAAAVTPSNVTKVSRVTGATPAGELLPNPNQTHTNHD CCCCCCHHHEEHHEEEEEHHCCCCCCEECCCCCHHHHHHCCCCCCHHCCCCCCCCCCCCC VHGTDLGIVWDKGGGEVFVLFGDTFGAGWCGNGGCGGGWRSNVLARSSDTNLANGLSFSS CCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHCCEEEECCCCCCCCCCCHHH MIQDGPRHAKEILASRKVNFDEITVIPTAGVTIGSRHYIHYMSIHHWGEAGMWFTNHAGI HHHCCHHHHHHHHHHCCCCCCEEEEEECCCEEECCCEEEEEEEEEEECCCCCEEECCCCE AYSDDQGQNWVKHPTARWQNTPAWTNNFQMAAFVRNGGFVYMYATPNGRFGNVHLARVPE EEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCEEEEECCC TALLDINGYRYWDGNGWSVSQAAARPVAIGIAGELSVSYHAPLGRFLMTYLNEHRQAVVM EEEEEECCEEEECCCCCEEHHHCCCEEEEEEEEEEEEEECCCHHHHHHHHHHCCCEEEEE RDAATPTGPWSGEKVLASGAVYPGLYNAFIHPWGNTGNSLYFVMSQWTPYNTFLMRATLA ECCCCCCCCCCCCEEEECCCCCCCHHHHEECCCCCCCCEEEEEEECCCCCHHEEEEEHHH HDAHSDNLLSEPGFETQAATPVMAPWYLQGSGGVDRALGNARSGQDNGFVNASSGWNALK CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHCCCCCCCCCCEEECCCCHHHHH QSVVVQPYTDYTLRGWVRSSANNTAGYFGARGPGNGPILGEVPFGALGAYTERVVHFNSG HCEEEECCCCCEEEHEEECCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHEEEEEEECCC PNALIEVYGGLWADNVDTWMQLDDVSLTRGSNLIHQAGFEQQSTNNATSPWYTEGRAGID CCEEHHHHCCCCCCCCCCEEEECCEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHH RGLGYARTGANNAWARNDTGWNAVKQEVAVTPNTQYTLTGWVKTSTNHADGYFGARLLRS HCCCEEECCCCCCCCCCCCCHHHHHHCEEECCCCCEEEEEEEEECCCCCCCHHHHHHHHC GPILNEVRFAQPLGNYTQLSVSFNSGAQHSVEVFAGMWANTGDTWIQVDDLTLTRN CCCHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCEEEEEEEEEECC >Mature Secondary Structure MKRMTTWKRTFLLHATWALLWGTPAAAVTPSNVTKVSRVTGATPAGELLPNPNQTHTNHD CCCCCCHHHEEHHEEEEEHHCCCCCCEECCCCCHHHHHHCCCCCCHHCCCCCCCCCCCCC VHGTDLGIVWDKGGGEVFVLFGDTFGAGWCGNGGCGGGWRSNVLARSSDTNLANGLSFSS CCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHCCEEEECCCCCCCCCCCHHH MIQDGPRHAKEILASRKVNFDEITVIPTAGVTIGSRHYIHYMSIHHWGEAGMWFTNHAGI HHHCCHHHHHHHHHHCCCCCCEEEEEECCCEEECCCEEEEEEEEEEECCCCCEEECCCCE AYSDDQGQNWVKHPTARWQNTPAWTNNFQMAAFVRNGGFVYMYATPNGRFGNVHLARVPE EEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCEEEEECCC TALLDINGYRYWDGNGWSVSQAAARPVAIGIAGELSVSYHAPLGRFLMTYLNEHRQAVVM EEEEEECCEEEECCCCCEEHHHCCCEEEEEEEEEEEEEECCCHHHHHHHHHHCCCEEEEE RDAATPTGPWSGEKVLASGAVYPGLYNAFIHPWGNTGNSLYFVMSQWTPYNTFLMRATLA ECCCCCCCCCCCCEEEECCCCCCCHHHHEECCCCCCCCEEEEEEECCCCCHHEEEEEHHH HDAHSDNLLSEPGFETQAATPVMAPWYLQGSGGVDRALGNARSGQDNGFVNASSGWNALK CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHCCCCCCCCCCEEECCCCHHHHH QSVVVQPYTDYTLRGWVRSSANNTAGYFGARGPGNGPILGEVPFGALGAYTERVVHFNSG HCEEEECCCCCEEEHEEECCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHEEEEEEECCC PNALIEVYGGLWADNVDTWMQLDDVSLTRGSNLIHQAGFEQQSTNNATSPWYTEGRAGID CCEEHHHHCCCCCCCCCCEEEECCEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHH RGLGYARTGANNAWARNDTGWNAVKQEVAVTPNTQYTLTGWVKTSTNHADGYFGARLLRS HCCCEEECCCCCCCCCCCCCHHHHHHCEEECCCCCEEEEEEEEECCCCCCCHHHHHHHHC GPILNEVRFAQPLGNYTQLSVSFNSGAQHSVEVFAGMWANTGDTWIQVDDLTLTRN CCCHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA