| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is frzS [H]
Identifier: 108759929
GI number: 108759929
Start: 5096349
End: 5098037
Strand: Direct
Name: frzS [H]
Synonym: MXAN_4149
Alternate gene names: 108759929
Gene position: 5096349-5098037 (Clockwise)
Preceding gene: 108758875
Following gene: 108760100
Centisome position: 55.76
GC content: 71.23
Gene sequence:
>1689_bases ATGTCGAAGAAAATCCTGATCGTCGAAAGCGACACCGCGCTCTCCGCCACCCTGCGCTCGGCCCTGGAGGGCCGGGGCTT CACGGTCGACGAGACGACCGACGGCAAGGGCAGCGTGGAGCAGATCCGCAGGGACCGGCCAGACCTCGTGGTGCTCGCGG TGGACCTCTCCGCGGGACAGAACGGCTACCTCATCTGCGGCAAGCTGAAGAAGGACGATGACCTCAAGAACGTCCCCATC GTCATCATCGGCAACCCGGACGGCTTCGCGCAGCACCGCAAGCTGAAGGCCCACGCCGACGAGTACGTCGCCAAGCCGGT GGACGCGGATCAACTGGTGGAGCGCGCGGGTGCGCTGATCGGCTTTCCCGAGCTGCCCGCCACCGAGGATGTCGTCGACG AGAGCCTCACGCTGGACGCGCTCGGCGACGAGCCGATGACGGCGGACTTCGGCGAGGAGATCTCCGTGGAGACCGCGGAG GAGCCTTCCGTTACGGGCGAGGAGCTGGACCTGGACGCCGCCTTCGGCGACCTGTCCGCGCCCGAGGAGACGCCGTCCTT CGAGGAAGAAGTCGTCGTCGCGCCGCCCGAAGCGGTGGTGGAAGGCGTGGAGGAGGACTTCTCCACGCTCGACTCGCTGG GCACCGACTCGGTGGATCCGCTCGAGGGGCTGGATGACGCCTCCGACGAGAAGACGGTGATCGGCTTCATTGCTCCGGCC CCCGTCGCCGCGCCTCCGCCCGAGCCGCCCCGCGCCGTCGCGCCGCCCCCGGTGCCCCGTCCCTCCGCGCCGGCCCGCCC TGCCCCGCCGCCCGTCGCGGTGGCGCCCGCGGCCGACGCCGCGGAGCTGCGCAGCCTGCGCGCGAAGGTGGCCGAACTGC AGGCCGAGCTCGACGACTCGCGTGGCGCGGCGTCCCACGCCGAGGAGCGCGTGCGTGACCTGGAGGCGCAGTTGGAGAGC CAGGCCACGGAGCTGGAGACGGCCCGGGCGTCCTCGGGGAAGAACGACAAGGACACCTTCGCCCTCCGCGACGCGGCCAA CAAGAAGGACAAGGAGATCCTCCGCCTCAAGACGGAGCTGAATCAAAAGGACCAGGAAATCATCGAGCTCAAGGACGAGA GCCTGGAGCTGGAGCAGAAGGCCAGCACCGCCGAGTCCGAGCTCGCCCAGCGCGACGCCCAGCTCAAGACGCTGAGCGCC CGGGCGGAGTCGCTCGCCACGGACCGCAGGCGCGTGGACCAGCAGTTGGCCGCCGCCAAGGAAGAGGCCCGGGGCGCGTC CGCGCAGCTCACCGCGCTGCAGACGGAGCTGGACCAGCACCAGGCCCAGGCGCATGCCTACGCCGCGGAGCTGGAGGAGC TGCGCGCTCGCGCGGGGCAGCTGGAGGCGGACGTCCAGGCCGCGCAGCATGAGGCCGAGGACCTGCGCGTCCAGGTGGGC CAGGCCCAGGTGGAGCTGTCCGAGCAGAGCAGCCGCGCCAGCGCGGAGGCCGACGAACTGCGCGGCCGCATCGCCGAGCT GGAGGCCGCCACGGCCCGCAACGAGGAGCGCGTGACGCGCCTCTACGCGCGCATCAAGAGCGAGGAGAAGCTGCGCGAGA AGACGAAGAAGGCGCTCGTCATCGCGCAGCAGCTCCTGGACGAGCCCGCGTCCTCGGTGGCGGACGACGCCAGCGAAGCC GCGGCCTAG
Upstream 100 bases:
>100_bases TCCCGCACATGGCCGATAGCCTCGACGCACATCATCACCTTGCGCGTCGCGGCCGGTAGGGCGTTTGTGCGCGCCGCACA CCAGGACGGGCCGTCCCTCC
Downstream 100 bases:
>100_bases TCGCACGGGCCGCGCTCCCCGGGCCACCCGTGCCCGGGGCACTGCCAGCCCCTACCCCTGCTTCTTCGGGGCCGTCTTCT TCTCGTGCAGCTTCTTCGCG
Product: response regulator FrzS
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 562; Mature: 561
Protein sequence:
>562_residues MSKKILIVESDTALSATLRSALEGRGFTVDETTDGKGSVEQIRRDRPDLVVLAVDLSAGQNGYLICGKLKKDDDLKNVPI VIIGNPDGFAQHRKLKAHADEYVAKPVDADQLVERAGALIGFPELPATEDVVDESLTLDALGDEPMTADFGEEISVETAE EPSVTGEELDLDAAFGDLSAPEETPSFEEEVVVAPPEAVVEGVEEDFSTLDSLGTDSVDPLEGLDDASDEKTVIGFIAPA PVAAPPPEPPRAVAPPPVPRPSAPARPAPPPVAVAPAADAAELRSLRAKVAELQAELDDSRGAASHAEERVRDLEAQLES QATELETARASSGKNDKDTFALRDAANKKDKEILRLKTELNQKDQEIIELKDESLELEQKASTAESELAQRDAQLKTLSA RAESLATDRRRVDQQLAAAKEEARGASAQLTALQTELDQHQAQAHAYAAELEELRARAGQLEADVQAAQHEAEDLRVQVG QAQVELSEQSSRASAEADELRGRIAELEAATARNEERVTRLYARIKSEEKLREKTKKALVIAQQLLDEPASSVADDASEA AA
Sequences:
>Translated_562_residues MSKKILIVESDTALSATLRSALEGRGFTVDETTDGKGSVEQIRRDRPDLVVLAVDLSAGQNGYLICGKLKKDDDLKNVPI VIIGNPDGFAQHRKLKAHADEYVAKPVDADQLVERAGALIGFPELPATEDVVDESLTLDALGDEPMTADFGEEISVETAE EPSVTGEELDLDAAFGDLSAPEETPSFEEEVVVAPPEAVVEGVEEDFSTLDSLGTDSVDPLEGLDDASDEKTVIGFIAPA PVAAPPPEPPRAVAPPPVPRPSAPARPAPPPVAVAPAADAAELRSLRAKVAELQAELDDSRGAASHAEERVRDLEAQLES QATELETARASSGKNDKDTFALRDAANKKDKEILRLKTELNQKDQEIIELKDESLELEQKASTAESELAQRDAQLKTLSA RAESLATDRRRVDQQLAAAKEEARGASAQLTALQTELDQHQAQAHAYAAELEELRARAGQLEADVQAAQHEAEDLRVQVG QAQVELSEQSSRASAEADELRGRIAELEAATARNEERVTRLYARIKSEEKLREKTKKALVIAQQLLDEPASSVADDASEA AA >Mature_561_residues SKKILIVESDTALSATLRSALEGRGFTVDETTDGKGSVEQIRRDRPDLVVLAVDLSAGQNGYLICGKLKKDDDLKNVPIV IIGNPDGFAQHRKLKAHADEYVAKPVDADQLVERAGALIGFPELPATEDVVDESLTLDALGDEPMTADFGEEISVETAEE PSVTGEELDLDAAFGDLSAPEETPSFEEEVVVAPPEAVVEGVEEDFSTLDSLGTDSVDPLEGLDDASDEKTVIGFIAPAP VAAPPPEPPRAVAPPPVPRPSAPARPAPPPVAVAPAADAAELRSLRAKVAELQAELDDSRGAASHAEERVRDLEAQLESQ ATELETARASSGKNDKDTFALRDAANKKDKEILRLKTELNQKDQEIIELKDESLELEQKASTAESELAQRDAQLKTLSAR AESLATDRRRVDQQLAAAKEEARGASAQLTALQTELDQHQAQAHAYAAELEELRARAGQLEADVQAAQHEAEDLRVQVGQ AQVELSEQSSRASAEADELRGRIAELEAATARNEERVTRLYARIKSEEKLREKTKKALVIAQQLLDEPASSVADDASEAA A
Specific function: Required for adventurous-gliding motility (A motility), in response to environmental signals sensed by the frz chemosensory system. Forms ordered clusters that span the cell length and that remain stationary relative to the surface across which the cells
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm. Note=In motile cells, localizes in ordered clusters spanning the cell length. In stalled cells, localizes at the leading cell pole [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 60279; Mature: 60148
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKILIVESDTALSATLRSALEGRGFTVDETTDGKGSVEQIRRDRPDLVVLAVDLSAGQ CCCEEEEEECCHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHCCCCCEEEEEEEECCCC NGYLICGKLKKDDDLKNVPIVIIGNPDGFAQHRKLKAHADEYVAKPVDADQLVERAGALI CCEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEE GFPELPATEDVVDESLTLDALGDEPMTADFGEEISVETAEEPSVTGEELDLDAAFGDLSA CCCCCCCCHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCC PEETPSFEEEVVVAPPEAVVEGVEEDFSTLDSLGTDSVDPLEGLDDASDEKTVIGFIAPA CCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCEEEEEECCC PVAAPPPEPPRAVAPPPVPRPSAPARPAPPPVAVAPAADAAELRSLRAKVAELQAELDDS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCC RGAASHAEERVRDLEAQLESQATELETARASSGKNDKDTFALRDAANKKDKEILRLKTEL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHH NQKDQEIIELKDESLELEQKASTAESELAQRDAQLKTLSARAESLATDRRRVDQQLAAAK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEARGASAQLTALQTELDQHQAQAHAYAAELEELRARAGQLEADVQAAQHEAEDLRVQVG HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC QAQVELSEQSSRASAEADELRGRIAELEAATARNEERVTRLYARIKSEEKLREKTKKALV HHHEEHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHH IAQQLLDEPASSVADDASEAAA HHHHHHHCHHHHHHCCHHHCCC >Mature Secondary Structure SKKILIVESDTALSATLRSALEGRGFTVDETTDGKGSVEQIRRDRPDLVVLAVDLSAGQ CCEEEEEECCHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHCCCCCEEEEEEEECCCC NGYLICGKLKKDDDLKNVPIVIIGNPDGFAQHRKLKAHADEYVAKPVDADQLVERAGALI CCEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEE GFPELPATEDVVDESLTLDALGDEPMTADFGEEISVETAEEPSVTGEELDLDAAFGDLSA CCCCCCCCHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCC PEETPSFEEEVVVAPPEAVVEGVEEDFSTLDSLGTDSVDPLEGLDDASDEKTVIGFIAPA CCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCEEEEEECCC PVAAPPPEPPRAVAPPPVPRPSAPARPAPPPVAVAPAADAAELRSLRAKVAELQAELDDS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCC RGAASHAEERVRDLEAQLESQATELETARASSGKNDKDTFALRDAANKKDKEILRLKTEL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHH NQKDQEIIELKDESLELEQKASTAESELAQRDAQLKTLSARAESLATDRRRVDQQLAAAK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEARGASAQLTALQTELDQHQAQAHAYAAELEELRARAGQLEADVQAAQHEAEDLRVQVG HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC QAQVELSEQSSRASAEADELRGRIAELEAATARNEERVTRLYARIKSEEKLREKTKKALV HHHEEHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHH IAQQLLDEPASSVADDASEAAA HHHHHHHCHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA