| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108759880
Identifier: 108759880
GI number: 108759880
Start: 3318246
End: 3318941
Strand: Reverse
Name: 108759880
Synonym: MXAN_2848
Alternate gene names: NA
Gene position: 3318941-3318246 (Counterclockwise)
Preceding gene: 108759863
Following gene: 108759716
Centisome position: 36.31
GC content: 69.97
Gene sequence:
>696_bases ATGGCGCAGCCAGGCAGGCGTCGCATGTACCTGGGGATGGCCGGCACGGCCGTGATGCTGTTGGGAGGCTGTGCCTCCCA TCGCTCCAGCGCGAAGGTGGACAAGCAATGGGTGGCGCGCGTCCCACCCGGCGAGCTGGGAAACGTGCGCGAGGCGCAGC TCACGGAGGACCATGCCCGGGAGCAGATCCCCCGCACCCAGGTGGCCAGACAGGACGCCGAGGCGGAGCGAGAAGTCGCC CAACGCAACGAGGACGCCACGAAGTCCCGCCACGAAGCAGCTGAGGCAGCGCTCGAGGCCGCGCAGGCAACGGGTGACGT CGCGGCCATCGAGCGGGCCCAGAATGCCGCCTGCACGACCCAGCACGCCCTCACCCTGGCCGAGGCGGAGACGGCTTGGC GCGACGACGCGGTGACGACGTTGAAGTCGCTGGAGGTCATGCGCCAGCGGGAGCTGGACGTGGCCGACGCCCAGCTCGAA CAGGCGAAGTACGAAGCCGTCAACGCCAACGCGGACGTCCGGGCGAAAGAGTTGTCCCCAGGGGACTTCTCCAGCGCCGT CGCCGACGCCCGGCGAAAGGCGGCGGATCAGCAGCGCCAGGTGGACGCCAACCTCCAGCGCGAACATCAGGCCAAGGCGC GCTGGCAACAGTTGCAGGACCAGGGCTACGGAGGCAGCGGCTCGCAGCAGCCCTGA
Upstream 100 bases:
>100_bases TTGAGCGGGGGCGTGTGGCGCGCCGAGCGGTGCGCCGCTGCTTTCACCCTCCCCCGGATGCGCACAGTTTCGGACAGGAC CCTATGACCGGGAGGAAGGC
Downstream 100 bases:
>100_bases GACGCGCCTTCACCTCGTAGCGCCTCACGTGACAGCGCGGGCCGGAGCACCGTGCTCCGGCCCGCGCCGCCATGCCCGCA TCCCGCTCACTGCGCCTCAG
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MAQPGRRRMYLGMAGTAVMLLGGCASHRSSAKVDKQWVARVPPGELGNVREAQLTEDHAREQIPRTQVARQDAEAEREVA QRNEDATKSRHEAAEAALEAAQATGDVAAIERAQNAACTTQHALTLAEAETAWRDDAVTTLKSLEVMRQRELDVADAQLE QAKYEAVNANADVRAKELSPGDFSSAVADARRKAADQQRQVDANLQREHQAKARWQQLQDQGYGGSGSQQP
Sequences:
>Translated_231_residues MAQPGRRRMYLGMAGTAVMLLGGCASHRSSAKVDKQWVARVPPGELGNVREAQLTEDHAREQIPRTQVARQDAEAEREVA QRNEDATKSRHEAAEAALEAAQATGDVAAIERAQNAACTTQHALTLAEAETAWRDDAVTTLKSLEVMRQRELDVADAQLE QAKYEAVNANADVRAKELSPGDFSSAVADARRKAADQQRQVDANLQREHQAKARWQQLQDQGYGGSGSQQP >Mature_230_residues AQPGRRRMYLGMAGTAVMLLGGCASHRSSAKVDKQWVARVPPGELGNVREAQLTEDHAREQIPRTQVARQDAEAEREVAQ RNEDATKSRHEAAEAALEAAQATGDVAAIERAQNAACTTQHALTLAEAETAWRDDAVTTLKSLEVMRQRELDVADAQLEQ AKYEAVNANADVRAKELSPGDFSSAVADARRKAADQQRQVDANLQREHQAKARWQQLQDQGYGGSGSQQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25208; Mature: 25077
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQPGRRRMYLGMAGTAVMLLGGCASHRSSAKVDKQWVARVPPGELGNVREAQLTEDHAR CCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH EQIPRTQVARQDAEAEREVAQRNEDATKSRHEAAEAALEAAQATGDVAAIERAQNAACTT HHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH QHALTLAEAETAWRDDAVTTLKSLEVMRQRELDVADAQLEQAKYEAVNANADVRAKELSP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEECCCCC GDFSSAVADARRKAADQQRQVDANLQREHQAKARWQQLQDQGYGGSGSQQP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AQPGRRRMYLGMAGTAVMLLGGCASHRSSAKVDKQWVARVPPGELGNVREAQLTEDHAR CCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH EQIPRTQVARQDAEAEREVAQRNEDATKSRHEAAEAALEAAQATGDVAAIERAQNAACTT HHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH QHALTLAEAETAWRDDAVTTLKSLEVMRQRELDVADAQLEQAKYEAVNANADVRAKELSP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEECCCCC GDFSSAVADARRKAADQQRQVDANLQREHQAKARWQQLQDQGYGGSGSQQP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA