| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108759799
Identifier: 108759799
GI number: 108759799
Start: 5201839
End: 5202270
Strand: Direct
Name: 108759799
Synonym: MXAN_4242
Alternate gene names: NA
Gene position: 5201839-5202270 (Clockwise)
Preceding gene: 108758958
Following gene: 108756887
Centisome position: 56.91
GC content: 65.97
Gene sequence:
>432_bases TTGACTCTTACGACGGCCGTCGTAATACTCCGCGAGATGACCACCCACGCCCTCCCGCAGCCGACGCGGGCCGAGCTGGC CATCCTCCGTGTACTCTGGAAGCAGGGCCCCAGCACCGTCCGACAGGTGCATGAGCTGATGCGGGGCACCCAGGACAAGG ACACCGGCTACACCACGGTCCTCAAGCTCCTGCAGAACATGACGGAGAAGGGCATCGTCCAGCGTGACGAGAGCGAGCGG ACCCATGTCTATGAAGCCGCCATCAGCGAGACGCGCACCCAGCGCGACCTCCTGCGCGACTTGATGGACCGGGCCTTCGG GGGGTCCGCCACGTCGGTCGTGGCCCAGGCGTTGTCTATGAAGCGCGCGTCCGCCGAGGAGCTGGCGGAGATTCGCAGGC TGCTCGACGCACACGAAAAGCGGGGGAAGTGA
Upstream 100 bases:
>100_bases TCGCTGACCACCCTCGACCCGCTCCGCGAGCTCAAAGCCCTGGCCCCCGCCCCTTAGCAAGGGCAATGCCTCCAGGAACG GCCATCTACGACGGGCGTCG
Downstream 100 bases:
>100_bases TGGACGCGCGTTATCTCCACGCCCTGGAGCAGGCGCTGCTCGGCTTCCTGTGGCAGGGCGCGGTAGTAGCCCTGGCGGTC GCGGGTATCCTGTCCCTGAC
Product: putative transcriptional regulator
Products: NA
Alternate protein names: CopY Family Transcriptional Regulator; Transcriptional Regulator; BlaI/MecI/CopY Family Transcriptional Regulator; Penicillinase Repressor; Transcriptional Repressor Copy Family; Transcriptional Regulator TrmB; Transcriptional Repressor CopY; MarR Family Transcriptional Regulatory Protein
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MTLTTAVVILREMTTHALPQPTRAELAILRVLWKQGPSTVRQVHELMRGTQDKDTGYTTVLKLLQNMTEKGIVQRDESER THVYEAAISETRTQRDLLRDLMDRAFGGSATSVVAQALSMKRASAEELAEIRRLLDAHEKRGK
Sequences:
>Translated_143_residues MTLTTAVVILREMTTHALPQPTRAELAILRVLWKQGPSTVRQVHELMRGTQDKDTGYTTVLKLLQNMTEKGIVQRDESER THVYEAAISETRTQRDLLRDLMDRAFGGSATSVVAQALSMKRASAEELAEIRRLLDAHEKRGK >Mature_142_residues TLTTAVVILREMTTHALPQPTRAELAILRVLWKQGPSTVRQVHELMRGTQDKDTGYTTVLKLLQNMTEKGIVQRDESERT HVYEAAISETRTQRDLLRDLMDRAFGGSATSVVAQALSMKRASAEELAEIRRLLDAHEKRGK
Specific function: Unknown
COG id: COG3682
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16142; Mature: 16011
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTTAVVILREMTTHALPQPTRAELAILRVLWKQGPSTVRQVHELMRGTQDKDTGYTTV CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHH LKLLQNMTEKGIVQRDESERTHVYEAAISETRTQRDLLRDLMDRAFGGSATSVVAQALSM HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH KRASAEELAEIRRLLDAHEKRGK HHCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TLTTAVVILREMTTHALPQPTRAELAILRVLWKQGPSTVRQVHELMRGTQDKDTGYTTV HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHH LKLLQNMTEKGIVQRDESERTHVYEAAISETRTQRDLLRDLMDRAFGGSATSVVAQALSM HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH KRASAEELAEIRRLLDAHEKRGK HHCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA