Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

Click here to switch to the map view.

The map label for this gene is 108759799

Identifier: 108759799

GI number: 108759799

Start: 5201839

End: 5202270

Strand: Direct

Name: 108759799

Synonym: MXAN_4242

Alternate gene names: NA

Gene position: 5201839-5202270 (Clockwise)

Preceding gene: 108758958

Following gene: 108756887

Centisome position: 56.91

GC content: 65.97

Gene sequence:

>432_bases
TTGACTCTTACGACGGCCGTCGTAATACTCCGCGAGATGACCACCCACGCCCTCCCGCAGCCGACGCGGGCCGAGCTGGC
CATCCTCCGTGTACTCTGGAAGCAGGGCCCCAGCACCGTCCGACAGGTGCATGAGCTGATGCGGGGCACCCAGGACAAGG
ACACCGGCTACACCACGGTCCTCAAGCTCCTGCAGAACATGACGGAGAAGGGCATCGTCCAGCGTGACGAGAGCGAGCGG
ACCCATGTCTATGAAGCCGCCATCAGCGAGACGCGCACCCAGCGCGACCTCCTGCGCGACTTGATGGACCGGGCCTTCGG
GGGGTCCGCCACGTCGGTCGTGGCCCAGGCGTTGTCTATGAAGCGCGCGTCCGCCGAGGAGCTGGCGGAGATTCGCAGGC
TGCTCGACGCACACGAAAAGCGGGGGAAGTGA

Upstream 100 bases:

>100_bases
TCGCTGACCACCCTCGACCCGCTCCGCGAGCTCAAAGCCCTGGCCCCCGCCCCTTAGCAAGGGCAATGCCTCCAGGAACG
GCCATCTACGACGGGCGTCG

Downstream 100 bases:

>100_bases
TGGACGCGCGTTATCTCCACGCCCTGGAGCAGGCGCTGCTCGGCTTCCTGTGGCAGGGCGCGGTAGTAGCCCTGGCGGTC
GCGGGTATCCTGTCCCTGAC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: CopY Family Transcriptional Regulator; Transcriptional Regulator; BlaI/MecI/CopY Family Transcriptional Regulator; Penicillinase Repressor; Transcriptional Repressor Copy Family; Transcriptional Regulator TrmB; Transcriptional Repressor CopY; MarR Family Transcriptional Regulatory Protein

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MTLTTAVVILREMTTHALPQPTRAELAILRVLWKQGPSTVRQVHELMRGTQDKDTGYTTVLKLLQNMTEKGIVQRDESER
THVYEAAISETRTQRDLLRDLMDRAFGGSATSVVAQALSMKRASAEELAEIRRLLDAHEKRGK

Sequences:

>Translated_143_residues
MTLTTAVVILREMTTHALPQPTRAELAILRVLWKQGPSTVRQVHELMRGTQDKDTGYTTVLKLLQNMTEKGIVQRDESER
THVYEAAISETRTQRDLLRDLMDRAFGGSATSVVAQALSMKRASAEELAEIRRLLDAHEKRGK
>Mature_142_residues
TLTTAVVILREMTTHALPQPTRAELAILRVLWKQGPSTVRQVHELMRGTQDKDTGYTTVLKLLQNMTEKGIVQRDESERT
HVYEAAISETRTQRDLLRDLMDRAFGGSATSVVAQALSMKRASAEELAEIRRLLDAHEKRGK

Specific function: Unknown

COG id: COG3682

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16142; Mature: 16011

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTTAVVILREMTTHALPQPTRAELAILRVLWKQGPSTVRQVHELMRGTQDKDTGYTTV
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHH
LKLLQNMTEKGIVQRDESERTHVYEAAISETRTQRDLLRDLMDRAFGGSATSVVAQALSM
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
KRASAEELAEIRRLLDAHEKRGK
HHCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLTTAVVILREMTTHALPQPTRAELAILRVLWKQGPSTVRQVHELMRGTQDKDTGYTTV
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHH
LKLLQNMTEKGIVQRDESERTHVYEAAISETRTQRDLLRDLMDRAFGGSATSVVAQALSM
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
KRASAEELAEIRRLLDAHEKRGK
HHCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA